RNA–Protein interactions for RNA: ENST00000489927.1

PLOD3-216, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 562 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-216ENST00000489927 C15orf39Q6ZRI6 1047 aa17.7■□□□□ 0.42
PLOD3-216ENST00000489927 TAS1R1Q7RTX1 841 aa17.7■□□□□ 0.42
PLOD3-216ENST00000489927 CNNM3Q8NE01 707 aa17.7■□□□□ 0.42
PLOD3-216ENST00000489927 RPS6KC1Q96S38 1066 aa17.7■□□□□ 0.42
PLOD3-216ENST00000489927 MTRQ99707 1265 aa17.7■□□□□ 0.42
PLOD3-216ENST00000489927 NAP1L4Q99733 375 aaKnown RBP17.7■□□□□ 0.42
PLOD3-216ENST00000489927 EIF2AQ9BY44 585 aaKnown RBP17.7■□□□□ 0.42
PLOD3-216ENST00000489927 ZSWIM4Q9H7M6 989 aa17.7■□□□□ 0.42
PLOD3-216ENST00000489927 UBN1Q9NPG3 1134 aa17.7■□□□□ 0.42
PLOD3-216ENST00000489927 MAN1C1Q9NR34 630 aa17.7■□□□□ 0.42
PLOD3-216ENST00000489927 VPS13AQ96RL7 3174 aa17.7■□□□□ 0.42
PLOD3-216ENST00000489927 STK36Q9NRP7 1315 aa17.7■□□□□ 0.42
PLOD3-216ENST00000489927 PLXNA3P51805 1871 aa17.69■□□□□ 0.42
PLOD3-216ENST00000489927 ARL5CA6NH57 179 aa17.69■□□□□ 0.42
PLOD3-216ENST00000489927 URODP06132 367 aa17.69■□□□□ 0.42
PLOD3-216ENST00000489927 XBP1P17861 261 aa17.69■□□□□ 0.42
PLOD3-216ENST00000489927 MLH1P40692 756 aa17.69■□□□□ 0.42
PLOD3-216ENST00000489927 OR1G1P47890 313 aa17.69■□□□□ 0.42
PLOD3-216ENST00000489927 AK2P54819 239 aa17.69■□□□□ 0.42
PLOD3-216ENST00000489927 TDGQ13569 410 aa17.69■□□□□ 0.42
PLOD3-216ENST00000489927 CWF19L1Q69YN2 538 aaKnown RBP17.69■□□□□ 0.42
PLOD3-216ENST00000489927 COLGALT2Q8IYK4 626 aa17.69■□□□□ 0.42
PLOD3-216ENST00000489927 CPB2Q96IY4 423 aa17.69■□□□□ 0.42
PLOD3-216ENST00000489927 GAD1Q99259 594 aa17.69■□□□□ 0.42
PLOD3-216ENST00000489927 HERC2P3Q9BVR0 1158 aa17.69■□□□□ 0.42
PLOD3-216ENST00000489927 KCNK12Q9HB15 430 aa17.69■□□□□ 0.42
PLOD3-216ENST00000489927 XPNPEP1Q9NQW7 623 aa17.69■□□□□ 0.42
PLOD3-216ENST00000489927 HES2Q9Y543 173 aa17.69■□□□□ 0.42
PLOD3-216ENST00000489927 FAM205CA6NFA0 338 aa17.68■□□□□ 0.42
PLOD3-216ENST00000489927 F8W810 466 aa17.68■□□□□ 0.42
PLOD3-216ENST00000489927 INPPL1O15357 1258 aa17.68■□□□□ 0.42
PLOD3-216ENST00000489927 TEX28O15482 410 aa17.68■□□□□ 0.42
PLOD3-216ENST00000489927 SLITRK3O94933 977 aa17.68■□□□□ 0.42
PLOD3-216ENST00000489927 EFEMP2O95967 443 aa17.68■□□□□ 0.42
PLOD3-216ENST00000489927 NBL1P41271 181 aa17.68■□□□□ 0.42
PLOD3-216ENST00000489927 PTENP60484 403 aa17.68■□□□□ 0.42
PLOD3-216ENST00000489927 DSC1Q08554 894 aa17.68■□□□□ 0.42
PLOD3-216ENST00000489927 PCBP1Q15365 356 aaKnown RBP eCLIP17.68■□□□□ 0.42
PLOD3-216ENST00000489927 NOTUMQ6P988 496 aa17.68■□□□□ 0.42
PLOD3-216ENST00000489927 ASCL5Q7RTU5 278 aa17.68■□□□□ 0.42
PLOD3-216ENST00000489927 TPH2Q8IWU9 490 aa17.68■□□□□ 0.42
PLOD3-216ENST00000489927 SLFN12Q8IYM2 578 aa17.68■□□□□ 0.42
PLOD3-216ENST00000489927 RNF168Q8IYW5 571 aaPredicted RBP17.68■□□□□ 0.42
PLOD3-216ENST00000489927 FLCNQ8NFG4 579 aa17.68■□□□□ 0.42
PLOD3-216ENST00000489927 CMASQ8NFW8 434 aaPredicted RBP17.68■□□□□ 0.42
PLOD3-216ENST00000489927 ZFP42Q96MM3 310 aa17.68■□□□□ 0.42
PLOD3-216ENST00000489927 MIOSQ9NXC5 875 aa17.68■□□□□ 0.42
PLOD3-216ENST00000489927 TPCN1Q9ULQ1 816 aa17.68■□□□□ 0.42
PLOD3-216ENST00000489927 DUSP12Q9UNI6 340 aa17.68■□□□□ 0.42
PLOD3-216ENST00000489927 CCDC195A0A1B0GUA6 201 aa17.67■□□□□ 0.42
PLOD3-216ENST00000489927 INO80B-WBP1J3KQ70 363 aa17.67■□□□□ 0.42
PLOD3-216ENST00000489927 PFKFB2O60825 505 aa17.67■□□□□ 0.42
PLOD3-216ENST00000489927 N4BP1O75113 896 aaKnown RBP17.67■□□□□ 0.42
PLOD3-216ENST00000489927 BAG4O95429 457 aaKnown RBP17.67■□□□□ 0.42
PLOD3-216ENST00000489927 ADH1AP07327 375 aa17.67■□□□□ 0.42
PLOD3-216ENST00000489927 MYBP10242 640 aa17.67■□□□□ 0.42
PLOD3-216ENST00000489927 NPR3P17342 541 aa17.67■□□□□ 0.42
PLOD3-216ENST00000489927 AXLP30530 894 aa17.67■□□□□ 0.42
PLOD3-216ENST00000489927 GLUD2P49448 558 aa17.67■□□□□ 0.42
PLOD3-216ENST00000489927 SCNN1GP51170 649 aa17.67■□□□□ 0.42
PLOD3-216ENST00000489927 MBTD1Q05BQ5 628 aa17.67■□□□□ 0.42
PLOD3-216ENST00000489927 NR5A1Q13285 461 aa17.67■□□□□ 0.42
PLOD3-216ENST00000489927 MXD4Q14582 209 aaPredicted RBP17.67■□□□□ 0.42
PLOD3-216ENST00000489927 KIAA0319Q5VV43 1072 aa17.67■□□□□ 0.42
PLOD3-216ENST00000489927 CCDC51Q96ER9 411 aa17.67■□□□□ 0.42
PLOD3-216ENST00000489927 CSRNP2Q9H175 543 aa17.67■□□□□ 0.42
PLOD3-216ENST00000489927 SSX2IPQ9Y2D8 614 aa17.67■□□□□ 0.42
PLOD3-216ENST00000489927 ARID2Q68CP9 1835 aa17.67■□□□□ 0.42
PLOD3-216ENST00000489927 C2orf16Q68DN1 1984 aa17.66■□□□□ 0.42
PLOD3-216ENST00000489927 PI15O43692 258 aa17.66■□□□□ 0.42
PLOD3-216ENST00000489927 RFPL2O75678 378 aa17.66■□□□□ 0.42
PLOD3-216ENST00000489927 CTDNEP1O95476 244 aa17.66■□□□□ 0.42
PLOD3-216ENST00000489927 GLUD1P00367 558 aa17.66■□□□□ 0.42
PLOD3-216ENST00000489927 DSG1Q02413 1049 aa17.66■□□□□ 0.42
PLOD3-216ENST00000489927 NCBP1Q09161 790 aaKnown RBP17.66■□□□□ 0.42
PLOD3-216ENST00000489927 CAPSQ13938 189 aa17.66■□□□□ 0.42
PLOD3-216ENST00000489927 TFDP1Q14186 410 aa17.66■□□□□ 0.42
PLOD3-216ENST00000489927 AMHR2Q16671 573 aa17.66■□□□□ 0.42
PLOD3-216ENST00000489927 IFNLR1Q8IU57 520 aaPredicted RBP17.66■□□□□ 0.42
PLOD3-216ENST00000489927 ASAP3Q8TDY4 903 aa17.66■□□□□ 0.42
PLOD3-216ENST00000489927 SNX27Q96L92 541 aa17.66■□□□□ 0.42
PLOD3-216ENST00000489927 HSD17B14Q9BPX1 270 aa17.66■□□□□ 0.42
PLOD3-216ENST00000489927 EIF2AK1Q9BQI3 630 aaKnown RBP17.66■□□□□ 0.42
PLOD3-216ENST00000489927 APOL6Q9BWW8 343 aa17.66■□□□□ 0.42
PLOD3-216ENST00000489927 NXF3Q9H4D5 531 aaKnown RBP17.66■□□□□ 0.42
PLOD3-216ENST00000489927 RXFP1Q9HBX9 757 aa17.66■□□□□ 0.42
PLOD3-216ENST00000489927 PRR23AA6NEV1 266 aa17.65■□□□□ 0.42
PLOD3-216ENST00000489927 NARSO43776 548 aaKnown RBP17.65■□□□□ 0.42
PLOD3-216ENST00000489927 SPATA31D3P0C874 917 aa17.65■□□□□ 0.42
PLOD3-216ENST00000489927 ARF4P18085 180 aaPredicted RBP17.65■□□□□ 0.42
PLOD3-216ENST00000489927 AOC1P19801 751 aa17.65■□□□□ 0.42
PLOD3-216ENST00000489927 POU5F1BQ06416 359 aa17.65■□□□□ 0.42
PLOD3-216ENST00000489927 SPATA31D4Q6ZUB0 917 aa17.65■□□□□ 0.42
PLOD3-216ENST00000489927 SIX5Q8N196 739 aa17.65■□□□□ 0.42
PLOD3-216ENST00000489927 TNFRSF25Q93038 417 aa17.65■□□□□ 0.42
PLOD3-216ENST00000489927 B3GALT6Q96L58 329 aa17.65■□□□□ 0.42
PLOD3-216ENST00000489927 TRIM6Q9C030 488 aaPredicted RBP17.65■□□□□ 0.42
PLOD3-216ENST00000489927 WDR6Q9NNW5 1121 aaKnown RBP17.65■□□□□ 0.42
PLOD3-216ENST00000489927 CHST7Q9NS84 486 aa17.65■□□□□ 0.42
PLOD3-216ENST00000489927 IGSF9Q9P2J2 1179 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms