RNA–Protein interactions for RNA: ENST00000489692.1

GGPS1-207, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 3

Gene GGPS1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-207ENST00000489692 FAM178BQ8IXR5 827 aa13.02□□□□□ -0.33
GGPS1-207ENST00000489692 PGBD4Q96DM1 585 aa13.02□□□□□ -0.33
GGPS1-207ENST00000489692 TCF25Q9BQ70 676 aa13.02□□□□□ -0.33
GGPS1-207ENST00000489692 DHX33Q9H6R0 707 aaKnown RBP13.02□□□□□ -0.33
GGPS1-207ENST00000489692 FAM105AQ9NUU6 356 aa13.02□□□□□ -0.33
GGPS1-207ENST00000489692 RNF19AQ9NV58 838 aa13.02□□□□□ -0.33
GGPS1-207ENST00000489692 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.02□□□□□ -0.33
GGPS1-207ENST00000489692 SPTBN5Q9NRC6 3674 aaKnown RBP13.01□□□□□ -0.33
GGPS1-207ENST00000489692 REV3LO60673 3130 aa13.01□□□□□ -0.33
GGPS1-207ENST00000489692 A0A087WWV3 80 aa13.01□□□□□ -0.33
GGPS1-207ENST00000489692 POTEMA6NI47 508 aa13.01□□□□□ -0.33
GGPS1-207ENST00000489692 NT5C1B-RDH14C9J2C7 533 aa13.01□□□□□ -0.33
GGPS1-207ENST00000489692 INO80B-WBP1J3KQ70 363 aa13.01□□□□□ -0.33
GGPS1-207ENST00000489692 ASAP2O43150 1006 aa13.01□□□□□ -0.33
GGPS1-207ENST00000489692 USO1O60763 962 aaKnown RBP13.01□□□□□ -0.33
GGPS1-207ENST00000489692 TBX10O75333 385 aa13.01□□□□□ -0.33
GGPS1-207ENST00000489692 SLITRK3O94933 977 aa13.01□□□□□ -0.33
GGPS1-207ENST00000489692 SRGAP2BP0DMP2 458 aa13.01□□□□□ -0.33
GGPS1-207ENST00000489692 COL9A1P20849 921 aa13.01□□□□□ -0.33
GGPS1-207ENST00000489692 MARCKSP29966 332 aaPredicted RBP13.01□□□□□ -0.33
GGPS1-207ENST00000489692 LTBRP36941 435 aa13.01□□□□□ -0.33
GGPS1-207ENST00000489692 NLRP12P59046 1061 aa13.01□□□□□ -0.33
GGPS1-207ENST00000489692 ERVFC1P60507 584 aa13.01□□□□□ -0.33
GGPS1-207ENST00000489692 SPIRE1Q08AE8 756 aa13.01□□□□□ -0.33
GGPS1-207ENST00000489692 ADAM15Q13444 863 aa13.01□□□□□ -0.33
GGPS1-207ENST00000489692 ZRSR1Q15695 479 aaKnown RBP13.01□□□□□ -0.33
GGPS1-207ENST00000489692 PDE12Q6L8Q7 609 aaKnown RBP13.01□□□□□ -0.33
GGPS1-207ENST00000489692 LLGL2Q6P1M3 1020 aa13.01□□□□□ -0.33
GGPS1-207ENST00000489692 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.01□□□□□ -0.33
GGPS1-207ENST00000489692 LRRC55Q6ZSA7 311 aa13.01□□□□□ -0.33
GGPS1-207ENST00000489692 MAEAQ7L5Y9 396 aa13.01□□□□□ -0.33
GGPS1-207ENST00000489692 SRGAP1Q7Z6B7 1085 aa13.01□□□□□ -0.33
GGPS1-207ENST00000489692 EFHBQ8N7U6 833 aa13.01□□□□□ -0.33
GGPS1-207ENST00000489692 ERMNQ8TAM6 284 aa13.01□□□□□ -0.33
GGPS1-207ENST00000489692 URGCPQ8TCY9 931 aa13.01□□□□□ -0.33
GGPS1-207ENST00000489692 PIGOQ8TEQ8 1089 aa13.01□□□□□ -0.33
GGPS1-207ENST00000489692 TMEM169Q96HH4 297 aa13.01□□□□□ -0.33
GGPS1-207ENST00000489692 EPHX3Q9H6B9 360 aa13.01□□□□□ -0.33
GGPS1-207ENST00000489692 FBXO2Q9UK22 296 aaPredicted RBP13.01□□□□□ -0.33
GGPS1-207ENST00000489692 BARX2Q9UMQ3 279 aaPredicted RBP13.01□□□□□ -0.33
GGPS1-207ENST00000489692 SIP14410 1827 aa13□□□□□ -0.33
GGPS1-207ENST00000489692 WNT7AO00755 349 aa13□□□□□ -0.33
GGPS1-207ENST00000489692 OFD1O75665 1012 aa13□□□□□ -0.33
GGPS1-207ENST00000489692 OR52Z1P0C646 297 aa13□□□□□ -0.33
GGPS1-207ENST00000489692 TECP42680 631 aa13□□□□□ -0.33
GGPS1-207ENST00000489692 TRAPPC10P48553 1259 aa13□□□□□ -0.33
GGPS1-207ENST00000489692 BCAR1P56945 870 aa13□□□□□ -0.33
GGPS1-207ENST00000489692 SMAD4Q13485 552 aaKnown RBP13□□□□□ -0.33
GGPS1-207ENST00000489692 MXD4Q14582 209 aaPredicted RBP13□□□□□ -0.33
GGPS1-207ENST00000489692 TMEM132AQ24JP5 1023 aa13□□□□□ -0.33
GGPS1-207ENST00000489692 CTC1Q2NKJ3 1217 aa13□□□□□ -0.33
GGPS1-207ENST00000489692 NOMO2Q5JPE7 1267 aa13□□□□□ -0.33
GGPS1-207ENST00000489692 ZNF598Q86UK7 904 aaKnown RBP13□□□□□ -0.33
GGPS1-207ENST00000489692 MRFAP1L1Q96HT8 127 aa13□□□□□ -0.33
GGPS1-207ENST00000489692 FAM193BQ96PV7 902 aaPredicted RBP13□□□□□ -0.33
GGPS1-207ENST00000489692 POP1Q99575 1024 aaKnown RBP13□□□□□ -0.33
GGPS1-207ENST00000489692 TMEM60Q9H2L4 133 aa13□□□□□ -0.33
GGPS1-207ENST00000489692 IFT122Q9HBG6 1241 aa13□□□□□ -0.33
GGPS1-207ENST00000489692 CD320Q9NPF0 282 aa13□□□□□ -0.33
GGPS1-207ENST00000489692 ANKEF1Q9NU02 776 aa13□□□□□ -0.33
GGPS1-207ENST00000489692 AGPAT5Q9NUQ2 364 aa13□□□□□ -0.33
GGPS1-207ENST00000489692 FAM13BQ9NYF5 915 aa13□□□□□ -0.33
GGPS1-207ENST00000489692 HOOK1Q9UJC3 728 aaKnown RBP13□□□□□ -0.33
GGPS1-207ENST00000489692 PCDHB2Q9Y5E7 798 aa13□□□□□ -0.33
GGPS1-207ENST00000489692 SRPRBQ9Y5M8 271 aaKnown RBP13□□□□□ -0.33
GGPS1-207ENST00000489692 FAM86C2PA6NEL3 165 aa12.99□□□□□ -0.33
GGPS1-207ENST00000489692 MBTPS2O43462 519 aa12.99□□□□□ -0.33
GGPS1-207ENST00000489692 DGAT1O75907 488 aa12.99□□□□□ -0.33
GGPS1-207ENST00000489692 ATF7P17544 494 aaPredicted RBP12.99□□□□□ -0.33
GGPS1-207ENST00000489692 PLCB3Q01970 1234 aa12.99□□□□□ -0.33
GGPS1-207ENST00000489692 COL19A1Q14993 1142 aa12.99□□□□□ -0.33
GGPS1-207ENST00000489692 TMEM31Q5JXX7 168 aa12.99□□□□□ -0.33
GGPS1-207ENST00000489692 TTC38Q5R3I4 469 aa12.99□□□□□ -0.33
GGPS1-207ENST00000489692 ADHFE1Q8IWW8 467 aa12.99□□□□□ -0.33
GGPS1-207ENST00000489692 DHX40Q8IX18 779 aaKnown RBP12.99□□□□□ -0.33
GGPS1-207ENST00000489692 MTMR9Q96QG7 549 aa12.99□□□□□ -0.33
GGPS1-207ENST00000489692 CDCA3Q99618 268 aaPredicted RBP12.99□□□□□ -0.33
GGPS1-207ENST00000489692 HSD17B14Q9BPX1 270 aa12.99□□□□□ -0.33
GGPS1-207ENST00000489692 APOL6Q9BWW8 343 aa12.99□□□□□ -0.33
GGPS1-207ENST00000489692 APOL5Q9BWW9 433 aa12.99□□□□□ -0.33
GGPS1-207ENST00000489692 TRIM6Q9C030 488 aaPredicted RBP12.99□□□□□ -0.33
GGPS1-207ENST00000489692 POLR3FQ9H1D9 316 aaPredicted RBP12.99□□□□□ -0.33
GGPS1-207ENST00000489692 MINDY3Q9H8M7 445 aa12.99□□□□□ -0.33
GGPS1-207ENST00000489692 NGRNQ9NPE2 291 aaKnown RBP12.99□□□□□ -0.33
GGPS1-207ENST00000489692 PRKAG3Q9UGI9 489 aa12.99□□□□□ -0.33
GGPS1-207ENST00000489692 KCNH3Q9ULD8 1083 aa12.99□□□□□ -0.33
GGPS1-207ENST00000489692 LZTS1Q9Y250 596 aa12.99□□□□□ -0.33
GGPS1-207ENST00000489692 TTC3P53804 2025 aa12.99□□□□□ -0.33
GGPS1-207ENST00000489692 ARHGEF35A5YM69 484 aa12.98□□□□□ -0.33
GGPS1-207ENST00000489692 LRRIQ4A6NIV6 560 aa12.98□□□□□ -0.33
GGPS1-207ENST00000489692 SPDYE4A6NLX3 237 aa12.98□□□□□ -0.33
GGPS1-207ENST00000489692 BECN2A8MW95 431 aa12.98□□□□□ -0.33
GGPS1-207ENST00000489692 LYPLA2O95372 231 aa12.98□□□□□ -0.33
GGPS1-207ENST00000489692 ITGA4P13612 1032 aa12.98□□□□□ -0.33
GGPS1-207ENST00000489692 RARRES1P49788 294 aa12.98□□□□□ -0.33
GGPS1-207ENST00000489692 TERF1P54274 439 aa12.98□□□□□ -0.33
GGPS1-207ENST00000489692 ZP2Q05996 745 aa12.98□□□□□ -0.33
GGPS1-207ENST00000489692 SMC1AQ14683 1233 aaKnown RBP12.98□□□□□ -0.33
GGPS1-207ENST00000489692 DUSP6Q16828 381 aa12.98□□□□□ -0.33
GGPS1-207ENST00000489692 KANK3Q6NY19 840 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms