RNA–Protein interactions for RNA: ENST00000489656.5

VPS26A-205, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-205ENST00000489656 NLRP11P59045 1033 aaKnown RBP15.46■□□□□ 0.07
VPS26A-205ENST00000489656 CHMP4BP1P59074 171 aa15.46■□□□□ 0.07
VPS26A-205ENST00000489656 UBXN1Q04323 297 aa15.46■□□□□ 0.07
VPS26A-205ENST00000489656 SPECC1LQ69YQ0 1117 aa15.46■□□□□ 0.07
VPS26A-205ENST00000489656 TMC6Q7Z403 805 aa15.46■□□□□ 0.07
VPS26A-205ENST00000489656 CTU1Q7Z7A3 348 aaKnown RBP15.46■□□□□ 0.07
VPS26A-205ENST00000489656 RPAINQ86UA6 219 aa15.46■□□□□ 0.07
VPS26A-205ENST00000489656 POMGNT1Q8WZA1 660 aa15.46■□□□□ 0.07
VPS26A-205ENST00000489656 ACO2Q99798 780 aaKnown RBP15.46■□□□□ 0.07
VPS26A-205ENST00000489656 FDXACB1Q9BRP7 624 aaPredicted RBP15.46■□□□□ 0.07
VPS26A-205ENST00000489656 TARS2Q9BW92 718 aaKnown RBP15.46■□□□□ 0.07
VPS26A-205ENST00000489656 UNC93B1Q9H1C4 597 aa15.46■□□□□ 0.07
VPS26A-205ENST00000489656 MINDY3Q9H8M7 445 aa15.46■□□□□ 0.07
VPS26A-205ENST00000489656 KIAA1586Q9HCI6 787 aa15.46■□□□□ 0.07
VPS26A-205ENST00000489656 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.46■□□□□ 0.07
VPS26A-205ENST00000489656 CNTNAP2Q9UHC6 1331 aa15.45■□□□□ 0.06
VPS26A-205ENST00000489656 A0A0B4J269 797 aa15.45■□□□□ 0.06
VPS26A-205ENST00000489656 INO80B-WBP1J3KQ70 363 aa15.45■□□□□ 0.06
VPS26A-205ENST00000489656 TOM1L1O75674 476 aa15.45■□□□□ 0.06
VPS26A-205ENST00000489656 PROZP22891 400 aa15.45■□□□□ 0.06
VPS26A-205ENST00000489656 ZNF200P98182 395 aaPredicted RBP15.45■□□□□ 0.06
VPS26A-205ENST00000489656 TBX2Q13207 712 aaPredicted RBP15.45■□□□□ 0.06
VPS26A-205ENST00000489656 AMHR2Q16671 573 aa15.45■□□□□ 0.06
VPS26A-205ENST00000489656 HS1BP3Q53T59 392 aa15.45■□□□□ 0.06
VPS26A-205ENST00000489656 FKBP15Q5T1M5 1219 aa15.45■□□□□ 0.06
VPS26A-205ENST00000489656 GDF6Q6KF10 455 aaPredicted RBP15.45■□□□□ 0.06
VPS26A-205ENST00000489656 TSHZ1Q6ZSZ6 1077 aa15.45■□□□□ 0.06
VPS26A-205ENST00000489656 INTS8Q75QN2 995 aaKnown RBP15.45■□□□□ 0.06
VPS26A-205ENST00000489656 SERINC5Q86VE9 423 aa15.45■□□□□ 0.06
VPS26A-205ENST00000489656 GPD1LQ8N335 351 aa15.45■□□□□ 0.06
VPS26A-205ENST00000489656 SPC24Q8NBT2 197 aa15.45■□□□□ 0.06
VPS26A-205ENST00000489656 NLRP7Q8WX94 980 aa15.45■□□□□ 0.06
VPS26A-205ENST00000489656 SLC35C1Q96A29 364 aa15.45■□□□□ 0.06
VPS26A-205ENST00000489656 SEZ6LQ9BYH1 1024 aa15.45■□□□□ 0.06
VPS26A-205ENST00000489656 INO80BQ9C086 356 aaPredicted RBP15.45■□□□□ 0.06
VPS26A-205ENST00000489656 FAM49AQ9H0Q0 323 aaPredicted RBP15.45■□□□□ 0.06
VPS26A-205ENST00000489656 PCIF1Q9H4Z3 704 aa15.45■□□□□ 0.06
VPS26A-205ENST00000489656 PHF24Q9UPV7 400 aa15.45■□□□□ 0.06
VPS26A-205ENST00000489656 ABLIM1O14639 778 aa15.44■□□□□ 0.06
VPS26A-205ENST00000489656 EXTL3O43909 919 aa15.44■□□□□ 0.06
VPS26A-205ENST00000489656 LDHAP00338 332 aaKnown RBP15.44■□□□□ 0.06
VPS26A-205ENST00000489656 GSDMDP57764 484 aa15.44■□□□□ 0.06
VPS26A-205ENST00000489656 BFSP1Q12934 665 aa15.44■□□□□ 0.06
VPS26A-205ENST00000489656 PRPF4BQ13523 1007 aaKnown RBP15.44■□□□□ 0.06
VPS26A-205ENST00000489656 ITGA7Q13683 1181 aa15.44■□□□□ 0.06
VPS26A-205ENST00000489656 SNRNP35Q16560 246 aaKnown RBP15.44■□□□□ 0.06
VPS26A-205ENST00000489656 FBXO46Q6PJ61 603 aaPredicted RBP15.44■□□□□ 0.06
VPS26A-205ENST00000489656 SLC43A3Q8NBI5 491 aa15.44■□□□□ 0.06
VPS26A-205ENST00000489656 PPP1R13LQ8WUF5 828 aa15.44■□□□□ 0.06
VPS26A-205ENST00000489656 DNAJB3Q8WWF6 145 aa15.44■□□□□ 0.06
VPS26A-205ENST00000489656 MFSD14AQ96MC6 490 aa15.44■□□□□ 0.06
VPS26A-205ENST00000489656 GLT1D1Q96MS3 346 aa15.44■□□□□ 0.06
VPS26A-205ENST00000489656 GCOM2Q9BZD3 368 aaPredicted RBP15.44■□□□□ 0.06
VPS26A-205ENST00000489656 HAPLN2Q9GZV7 340 aa15.44■□□□□ 0.06
VPS26A-205ENST00000489656 PTPRHQ9HD43 1115 aa15.44■□□□□ 0.06
VPS26A-205ENST00000489656 OGDHLQ9ULD0 1010 aa15.44■□□□□ 0.06
VPS26A-205ENST00000489656 TNFSF13BQ9Y275 285 aa15.44■□□□□ 0.06
VPS26A-205ENST00000489656 A0A1W2PQ45 241 aaPredicted RBP15.43■□□□□ 0.06
VPS26A-205ENST00000489656 A0A1W2PQY0 241 aa15.43■□□□□ 0.06
VPS26A-205ENST00000489656 GTPBP10A4D1E9 387 aaKnown RBP15.43■□□□□ 0.06
VPS26A-205ENST00000489656 TTLL13PA6NNM8 815 aa15.43■□□□□ 0.06
VPS26A-205ENST00000489656 DNM1LO00429 736 aa15.43■□□□□ 0.06
VPS26A-205ENST00000489656 CLDN3O15551 220 aa15.43■□□□□ 0.06
VPS26A-205ENST00000489656 AFPP02771 609 aaKnown RBP15.43■□□□□ 0.06
VPS26A-205ENST00000489656 ADRB2P07550 413 aa15.43■□□□□ 0.06
VPS26A-205ENST00000489656 IQCF3P0C7M6 154 aa15.43■□□□□ 0.06
VPS26A-205ENST00000489656 CCL5P13501 91 aa15.43■□□□□ 0.06
VPS26A-205ENST00000489656 KRT13P13646 458 aa15.43■□□□□ 0.06
VPS26A-205ENST00000489656 MCL1Q07820 350 aa15.43■□□□□ 0.06
VPS26A-205ENST00000489656 KCNH2Q12809 1159 aa15.43■□□□□ 0.06
VPS26A-205ENST00000489656 TRIM14Q14142 442 aa15.43■□□□□ 0.06
VPS26A-205ENST00000489656 PKN2Q16513 984 aaKnown RBP15.43■□□□□ 0.06
VPS26A-205ENST00000489656 ATF7IP2Q5U623 682 aa15.43■□□□□ 0.06
VPS26A-205ENST00000489656 MPZL3Q6UWV2 235 aa15.43■□□□□ 0.06
VPS26A-205ENST00000489656 RSPH3Q86UC2 560 aa15.43■□□□□ 0.06
VPS26A-205ENST00000489656 ZSWIM2Q8NEG5 633 aa15.43■□□□□ 0.06
VPS26A-205ENST00000489656 SP7Q8TDD2 431 aaPredicted RBP15.43■□□□□ 0.06
VPS26A-205ENST00000489656 IQCDQ96DY2 449 aa15.43■□□□□ 0.06
VPS26A-205ENST00000489656 ZNF668Q96K58 619 aaPredicted RBP15.43■□□□□ 0.06
VPS26A-205ENST00000489656 SCLT1Q96NL6 688 aa15.43■□□□□ 0.06
VPS26A-205ENST00000489656 MSTO1Q9BUK6 570 aa15.43■□□□□ 0.06
VPS26A-205ENST00000489656 AGO2Q9UKV8 859 aaKnown RBP15.43■□□□□ 0.06
VPS26A-205ENST00000489656 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.43■□□□□ 0.062e-6■■□□□ 12
VPS26A-205ENST00000489656 TANC1Q9C0D5 1861 aa15.42■□□□□ 0.06
VPS26A-205ENST00000489656 A0A0U1RQG5 324 aaPredicted RBP15.42■□□□□ 0.06
VPS26A-205ENST00000489656 KBTBD13C9JR72 458 aa15.42■□□□□ 0.06
VPS26A-205ENST00000489656 PES1O00541 588 aaKnown RBP15.42■□□□□ 0.06
VPS26A-205ENST00000489656 PMM2O15305 246 aa15.42■□□□□ 0.06
VPS26A-205ENST00000489656 FAM189A1O60320 539 aa15.42■□□□□ 0.06
VPS26A-205ENST00000489656 PTMAP06454 111 aaKnown RBP15.42■□□□□ 0.06
VPS26A-205ENST00000489656 DARSP14868 501 aaKnown RBP15.42■□□□□ 0.06
VPS26A-205ENST00000489656 CTCFP49711 727 aaPredicted RBP15.42■□□□□ 0.06
VPS26A-205ENST00000489656 CRYBB1P53674 252 aaPredicted RBP15.42■□□□□ 0.06
VPS26A-205ENST00000489656 NOLC1Q14978 699 aaKnown RBP eCLIP15.42■□□□□ 0.06
VPS26A-205ENST00000489656 MTFR1Q15390 333 aa15.42■□□□□ 0.06
VPS26A-205ENST00000489656 KIZQ2M2Z5 673 aa15.42■□□□□ 0.06
VPS26A-205ENST00000489656 FAM47CQ5HY64 1035 aa15.42■□□□□ 0.06
VPS26A-205ENST00000489656 FIGNQ5HY92 759 aa15.42■□□□□ 0.06
VPS26A-205ENST00000489656 USP37Q86T82 979 aa15.42■□□□□ 0.06
VPS26A-205ENST00000489656 CBWD2Q8IUF1 395 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms