RNA–Protein interactions for RNA: ENST00000489611.5

COL9A1-208, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,940 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-208ENST00000489611 KCNA2P16389 499 aa16.17■□□□□ 0.18
COL9A1-208ENST00000489611 GARTP22102 1010 aa16.17■□□□□ 0.18
COL9A1-208ENST00000489611 CNGA1P29973 690 aa16.17■□□□□ 0.18
COL9A1-208ENST00000489611 SLC7A5Q01650 507 aa16.17■□□□□ 0.18
COL9A1-208ENST00000489611 PPATQ06203 517 aa16.17■□□□□ 0.18
COL9A1-208ENST00000489611 PPP3CAQ08209 521 aa16.17■□□□□ 0.18
COL9A1-208ENST00000489611 MAP1SQ66K74 1059 aaPredicted RBP16.17■□□□□ 0.18
COL9A1-208ENST00000489611 CATSPERGQ6ZRH7 1159 aa16.17■□□□□ 0.18
COL9A1-208ENST00000489611 ENOSF1Q7L5Y1 443 aa16.17■□□□□ 0.18
COL9A1-208ENST00000489611 DNERQ8NFT8 737 aa16.17■□□□□ 0.18
COL9A1-208ENST00000489611 CCDC26Q8TAB7 109 aa16.17■□□□□ 0.18
COL9A1-208ENST00000489611 OLIG1Q8TAK6 271 aa16.17■□□□□ 0.18
COL9A1-208ENST00000489611 AFAP1L1Q8TED9 768 aa16.17■□□□□ 0.18
COL9A1-208ENST00000489611 PCIF1Q9H4Z3 704 aa16.17■□□□□ 0.18
COL9A1-208ENST00000489611 RRAGCQ9HB90 399 aa16.17■□□□□ 0.18
COL9A1-208ENST00000489611 TMEM8AQ9HCN3 771 aa16.17■□□□□ 0.18
COL9A1-208ENST00000489611 JPH1Q9HDC5 661 aaPredicted RBP16.17■□□□□ 0.18
COL9A1-208ENST00000489611 EHD2Q9NZN4 543 aa16.17■□□□□ 0.18
COL9A1-208ENST00000489611 KIAA1217Q5T5P2 1943 aa16.17■□□□□ 0.18
COL9A1-208ENST00000489611 CCDC169A6NNP5 214 aa16.16■□□□□ 0.18
COL9A1-208ENST00000489611 ZC3H11AO75152 810 aaKnown RBP eCLIP16.16■□□□□ 0.18
COL9A1-208ENST00000489611 RPS6KA5O75582 802 aa16.16■□□□□ 0.18
COL9A1-208ENST00000489611 TTLL12Q14166 644 aaPredicted RBP16.16■□□□□ 0.18
COL9A1-208ENST00000489611 ARHGAP44Q17R89 818 aa16.16■□□□□ 0.18
COL9A1-208ENST00000489611 C11orf63Q6NUN7 778 aa16.16■□□□□ 0.18
COL9A1-208ENST00000489611 MIS18BP1Q6P0N0 1132 aa16.16■□□□□ 0.18
COL9A1-208ENST00000489611 LEKR1Q6ZMV7 388 aa16.16■□□□□ 0.18
COL9A1-208ENST00000489611 METTL13Q8N6R0 699 aa16.16■□□□□ 0.18
COL9A1-208ENST00000489611 CEP170P1Q96L14 293 aa16.16■□□□□ 0.18
COL9A1-208ENST00000489611 IFT74Q96LB3 600 aa16.16■□□□□ 0.18
COL9A1-208ENST00000489611 KRT12Q99456 494 aa16.16■□□□□ 0.18
COL9A1-208ENST00000489611 EPB41L5Q9HCM4 733 aa16.16■□□□□ 0.18
COL9A1-208ENST00000489611 CYP39A1Q9NYL5 469 aa16.16■□□□□ 0.18
COL9A1-208ENST00000489611 CWC15Q9P013 229 aaKnown RBP16.16■□□□□ 0.18
COL9A1-208ENST00000489611 SLC9A2Q9UBY0 812 aa16.16■□□□□ 0.18
COL9A1-208ENST00000489611 PACSIN2Q9UNF0 486 aaPredicted RBP16.16■□□□□ 0.18
COL9A1-208ENST00000489611 AFG3L2Q9Y4W6 797 aa16.16■□□□□ 0.18
COL9A1-208ENST00000489611 SPATA31C2B4DYI2 1134 aa16.15■□□□□ 0.18
COL9A1-208ENST00000489611 RTN2O75298 545 aa16.15■□□□□ 0.18
COL9A1-208ENST00000489611 GLI1P08151 1106 aa16.15■□□□□ 0.18
COL9A1-208ENST00000489611 ZBTB48P10074 688 aaPredicted RBP16.15■□□□□ 0.18
COL9A1-208ENST00000489611 NF2P35240 595 aa16.15■□□□□ 0.18
COL9A1-208ENST00000489611 GGCXP38435 758 aa16.15■□□□□ 0.18
COL9A1-208ENST00000489611 IREB2P48200 963 aaKnown RBP16.15■□□□□ 0.18
COL9A1-208ENST00000489611 LMAN1P49257 510 aa16.15■□□□□ 0.18
COL9A1-208ENST00000489611 GPC3P51654 580 aa16.15■□□□□ 0.18
COL9A1-208ENST00000489611 DLG4P78352 724 aa16.15■□□□□ 0.18
COL9A1-208ENST00000489611 GUCY2DQ02846 1103 aa16.15■□□□□ 0.18
COL9A1-208ENST00000489611 FAM71AQ8IYT1 594 aa16.15■□□□□ 0.18
COL9A1-208ENST00000489611 C1orf131Q8NDD1 294 aaKnown RBP16.15■□□□□ 0.18
COL9A1-208ENST00000489611 CHST13Q8NET6 341 aa16.15■□□□□ 0.18
COL9A1-208ENST00000489611 PARD3BQ8TEW8 1205 aa16.15■□□□□ 0.18
COL9A1-208ENST00000489611 CLMNQ96JQ2 1002 aa16.15■□□□□ 0.18
COL9A1-208ENST00000489611 MFSD14AQ96MC6 490 aa16.15■□□□□ 0.18
COL9A1-208ENST00000489611 SH3GL2Q99962 352 aa16.15■□□□□ 0.18
COL9A1-208ENST00000489611 TMEM117Q9H0C3 514 aa16.15■□□□□ 0.18
COL9A1-208ENST00000489611 FAM204AQ9H8W3 233 aa16.15■□□□□ 0.18
COL9A1-208ENST00000489611 SMARCAL1Q9NZC9 954 aa16.15■□□□□ 0.18
COL9A1-208ENST00000489611 GABBR1Q9UBS5 961 aa16.15■□□□□ 0.18
COL9A1-208ENST00000489611 RIPK3Q9Y572 518 aa16.15■□□□□ 0.18
COL9A1-208ENST00000489611 CSADQ9Y600 493 aa16.15■□□□□ 0.18
COL9A1-208ENST00000489611 WDR90Q96KV7 1748 aa16.15■□□□□ 0.18
COL9A1-208ENST00000489611 SCN4AP35499 1836 aa16.15■□□□□ 0.18
COL9A1-208ENST00000489611 DENND3A2RUS2 1198 aa16.15■□□□□ 0.18
COL9A1-208ENST00000489611 IVLP07476 585 aa16.15■□□□□ 0.18
COL9A1-208ENST00000489611 HSPA6P17066 643 aa16.15■□□□□ 0.18
COL9A1-208ENST00000489611 ACTN2P35609 894 aa16.15■□□□□ 0.18
COL9A1-208ENST00000489611 GCLMP48507 274 aa16.15■□□□□ 0.18
COL9A1-208ENST00000489611 XKR3Q5GH77 459 aa16.15■□□□□ 0.18
COL9A1-208ENST00000489611 SH3D19Q5HYK7 790 aa16.15■□□□□ 0.18
COL9A1-208ENST00000489611 C1orf220Q5T0J3 134 aa16.15■□□□□ 0.18
COL9A1-208ENST00000489611 ELP3Q9H9T3 547 aa16.15■□□□□ 0.18
COL9A1-208ENST00000489611 ATP6V0A4Q9HBG4 840 aa16.15■□□□□ 0.18
COL9A1-208ENST00000489611 PDLIM7Q9NR12 457 aa16.15■□□□□ 0.18
COL9A1-208ENST00000489611 FBXO40Q9UH90 709 aa16.15■□□□□ 0.18
COL9A1-208ENST00000489611 ZHX1Q9UKY1 873 aaPredicted RBP16.15■□□□□ 0.18
COL9A1-208ENST00000489611 NOC2LQ9Y3T9 749 aaKnown RBP16.15■□□□□ 0.18
COL9A1-208ENST00000489611 AGPSO00116 658 aa16.14■□□□□ 0.17
COL9A1-208ENST00000489611 KRIT1O00522 736 aa16.14■□□□□ 0.17
COL9A1-208ENST00000489611 BUB1BO60566 1050 aaPredicted RBP16.14■□□□□ 0.17
COL9A1-208ENST00000489611 MTA2O94776 668 aa16.14■□□□□ 0.17
COL9A1-208ENST00000489611 ICAM3P32942 547 aa16.14■□□□□ 0.17
COL9A1-208ENST00000489611 GPC5P78333 572 aa16.14■□□□□ 0.17
COL9A1-208ENST00000489611 FBXL13Q8NEE6 735 aa16.14■□□□□ 0.17
COL9A1-208ENST00000489611 SHC3Q92529 594 aa16.14■□□□□ 0.17
COL9A1-208ENST00000489611 RPS6KC1Q96S38 1066 aa16.14■□□□□ 0.17
COL9A1-208ENST00000489611 GOLGA6L10A0A0M3HER8 536 aa16.13■□□□□ 0.17
COL9A1-208ENST00000489611 CAPN2P17655 700 aa16.13■□□□□ 0.17
COL9A1-208ENST00000489611 DNA2P51530 1060 aa16.13■□□□□ 0.17
COL9A1-208ENST00000489611 TMEM132BQ14DG7 1078 aa16.13■□□□□ 0.17
COL9A1-208ENST00000489611 PLA2G4FQ68DD2 849 aa16.13■□□□□ 0.17
COL9A1-208ENST00000489611 SMYD5Q6GMV2 418 aa16.13■□□□□ 0.17
COL9A1-208ENST00000489611 ABHD15Q6UXT9 468 aa16.13■□□□□ 0.17
COL9A1-208ENST00000489611 GSPT2Q8IYD1 628 aaKnown RBP16.13■□□□□ 0.17
COL9A1-208ENST00000489611 UBL4BQ8N7F7 174 aa16.13■□□□□ 0.17
COL9A1-208ENST00000489611 FAM76AQ8TAV0 307 aa16.13■□□□□ 0.17
COL9A1-208ENST00000489611 NT5C1BQ96P26 610 aa16.13■□□□□ 0.17
COL9A1-208ENST00000489611 ZNF408Q9H9D4 720 aa16.13■□□□□ 0.17
COL9A1-208ENST00000489611 GPRC5CQ9NQ84 441 aa16.13■□□□□ 0.17
COL9A1-208ENST00000489611 CYP26B1Q9NR63 512 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms