RNA–Protein interactions for RNA: ENST00000489430.1

MRPL55-230, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-230ENST00000489430 BRWD1Q9NSI6 2320 aa20.98■□□□□ 0.95
MRPL55-230ENST00000489430 ARL5CA6NH57 179 aa20.97■□□□□ 0.95
MRPL55-230ENST00000489430 H3BQ06 376 aaPredicted RBP20.97■□□□□ 0.95
MRPL55-230ENST00000489430 ALDH2P05091 517 aa20.97■□□□□ 0.95
MRPL55-230ENST00000489430 PBX3P40426 434 aa20.97■□□□□ 0.95
MRPL55-230ENST00000489430 UBA7P41226 1012 aa20.97■□□□□ 0.95
MRPL55-230ENST00000489430 NRIP1P48552 1158 aa20.97■□□□□ 0.95
MRPL55-230ENST00000489430 DMP1Q13316 513 aaPredicted RBP20.97■□□□□ 0.95
MRPL55-230ENST00000489430 SF3A1Q15459 793 aaKnown RBP20.97■□□□□ 0.95
MRPL55-230ENST00000489430 DUSP6Q16828 381 aa20.97■□□□□ 0.95
MRPL55-230ENST00000489430 APBB1IPQ7Z5R6 666 aaPredicted RBP20.97■□□□□ 0.95
MRPL55-230ENST00000489430 ADGRD2Q7Z7M1 963 aa20.97■□□□□ 0.95
MRPL55-230ENST00000489430 FAM193BQ96PV7 902 aaPredicted RBP20.97■□□□□ 0.95
MRPL55-230ENST00000489430 ADPGKQ9BRR6 497 aa20.97■□□□□ 0.95
MRPL55-230ENST00000489430 ZSCAN16Q9H4T2 348 aaPredicted RBP20.97■□□□□ 0.95
MRPL55-230ENST00000489430 ENTPD7Q9NQZ7 604 aa20.97■□□□□ 0.95
MRPL55-230ENST00000489430 RBM19Q9Y4C8 960 aaKnown RBP20.97■□□□□ 0.95
MRPL55-230ENST00000489430 IRAK3Q9Y616 596 aa20.97■□□□□ 0.95
MRPL55-230ENST00000489430 MORC2Q9Y6X9 1032 aaPredicted RBP20.97■□□□□ 0.95
MRPL55-230ENST00000489430 PRKCBP05771 671 aa20.96■□□□□ 0.95
MRPL55-230ENST00000489430 SRGAP2BP0DMP2 458 aa20.96■□□□□ 0.95
MRPL55-230ENST00000489430 SMC1AQ14683 1233 aaKnown RBP20.96■□□□□ 0.95
MRPL55-230ENST00000489430 TMEM119Q4V9L6 283 aa20.96■□□□□ 0.95
MRPL55-230ENST00000489430 TMEM184AQ6ZMB5 413 aa20.96■□□□□ 0.95
MRPL55-230ENST00000489430 EP400NLQ6ZTU2 488 aa20.96■□□□□ 0.95
MRPL55-230ENST00000489430 TMC7Q7Z402 723 aa20.96■□□□□ 0.95
MRPL55-230ENST00000489430 KCNK18Q7Z418 384 aa20.96■□□□□ 0.95
MRPL55-230ENST00000489430 CABP7Q86V35 215 aa20.96■□□□□ 0.95
MRPL55-230ENST00000489430 ZNF280BQ86YH2 543 aa20.96■□□□□ 0.95
MRPL55-230ENST00000489430 MRPL43Q8N983 215 aaKnown RBP20.96■□□□□ 0.95
MRPL55-230ENST00000489430 CALML4Q96GE6 196 aa20.96■□□□□ 0.95
MRPL55-230ENST00000489430 PNMA5Q96PV4 448 aa20.96■□□□□ 0.95
MRPL55-230ENST00000489430 NTPCRQ9BSD7 190 aaKnown RBP20.96■□□□□ 0.95
MRPL55-230ENST00000489430 IGFLR1Q9H665 355 aa20.96■□□□□ 0.95
MRPL55-230ENST00000489430 TMEM134Q9H6X4 195 aa20.96■□□□□ 0.95
MRPL55-230ENST00000489430 PRKAG3Q9UGI9 489 aa20.96■□□□□ 0.95
MRPL55-230ENST00000489430 K7ERI5 159 aa20.95■□□□□ 0.94
MRPL55-230ENST00000489430 GTF2F1P35269 517 aaKnown RBP eCLIP20.95■□□□□ 0.94
MRPL55-230ENST00000489430 NPTX2P47972 431 aa20.95■□□□□ 0.94
MRPL55-230ENST00000489430 NDUFV1P49821 464 aa20.95■□□□□ 0.94
MRPL55-230ENST00000489430 DSC1Q08554 894 aa20.95■□□□□ 0.94
MRPL55-230ENST00000489430 COASYQ13057 564 aa20.95■□□□□ 0.94
MRPL55-230ENST00000489430 RESTQ13127 1097 aa20.95■□□□□ 0.94
MRPL55-230ENST00000489430 DAW1Q8N136 415 aa20.95■□□□□ 0.94
MRPL55-230ENST00000489430 MSLNLQ96KJ4 702 aa20.95■□□□□ 0.94
MRPL55-230ENST00000489430 GAD1Q99259 594 aa20.95■□□□□ 0.94
MRPL55-230ENST00000489430 RUSC1Q9BVN2 902 aa20.95■□□□□ 0.94
MRPL55-230ENST00000489430 RNF39Q9H2S5 420 aa20.95■□□□□ 0.94
MRPL55-230ENST00000489430 NXF3Q9H4D5 531 aaKnown RBP20.95■□□□□ 0.94
MRPL55-230ENST00000489430 PDZD7Q9H5P4 517 aa20.95■□□□□ 0.94
MRPL55-230ENST00000489430 HES2Q9Y543 173 aa20.95■□□□□ 0.94
MRPL55-230ENST00000489430 MYO7AQ13402 2215 aa20.94■□□□□ 0.94
MRPL55-230ENST00000489430 HIP1RO75146 1068 aa20.94■□□□□ 0.94
MRPL55-230ENST00000489430 TBX10O75333 385 aa20.94■□□□□ 0.94
MRPL55-230ENST00000489430 NR1I2O75469 434 aa20.94■□□□□ 0.94
MRPL55-230ENST00000489430 DDHD2O94830 711 aa20.94■□□□□ 0.94
MRPL55-230ENST00000489430 CSPG5O95196 566 aa20.94■□□□□ 0.94
MRPL55-230ENST00000489430 NPTXRO95502 500 aa20.94■□□□□ 0.94
MRPL55-230ENST00000489430 POMCP01189 267 aa20.94■□□□□ 0.94
MRPL55-230ENST00000489430 SCP2P22307 547 aa20.94■□□□□ 0.94
MRPL55-230ENST00000489430 MLH1P40692 756 aa20.94■□□□□ 0.94
MRPL55-230ENST00000489430 SLC11A1P49279 550 aa20.94■□□□□ 0.94
MRPL55-230ENST00000489430 AFF1P51825 1210 aaKnown RBP20.94■□□□□ 0.94
MRPL55-230ENST00000489430 SLC12A3P55017 1021 aa20.94■□□□□ 0.94
MRPL55-230ENST00000489430 PEX3P56589 373 aa20.94■□□□□ 0.94
MRPL55-230ENST00000489430 SMAD4Q13485 552 aaKnown RBP20.94■□□□□ 0.94
MRPL55-230ENST00000489430 KCNC3Q14003 757 aa20.94■□□□□ 0.94
MRPL55-230ENST00000489430 ZRSR1Q15695 479 aaKnown RBP20.94■□□□□ 0.94
MRPL55-230ENST00000489430 DCAF4L1Q3SXM0 396 aa20.94■□□□□ 0.94
MRPL55-230ENST00000489430 PLPP4Q5VZY2 271 aa20.94■□□□□ 0.94
MRPL55-230ENST00000489430 RBM23Q86U06 439 aaKnown RBP20.94■□□□□ 0.94
MRPL55-230ENST00000489430 SPIRE2Q8WWL2 714 aa20.94■□□□□ 0.94
MRPL55-230ENST00000489430 ARHGAP28Q9P2N2 729 aa20.94■□□□□ 0.94
MRPL55-230ENST00000489430 DNAJB4Q9UDY4 337 aa20.94■□□□□ 0.94
MRPL55-230ENST00000489430 CD207Q9UJ71 328 aa20.94■□□□□ 0.94
MRPL55-230ENST00000489430 MTMR6Q9Y217 621 aa20.94■□□□□ 0.94
MRPL55-230ENST00000489430 FAN1Q9Y2M0 1017 aa20.94■□□□□ 0.94
MRPL55-230ENST00000489430 NCOR1O75376 2440 aa20.93■□□□□ 0.94
MRPL55-230ENST00000489430 C2orf71A6NGG8 1288 aa20.93■□□□□ 0.94
MRPL55-230ENST00000489430 NT5C1B-RDH14C9J2C7 533 aa20.93■□□□□ 0.94
MRPL55-230ENST00000489430 LINC01565O15544 149 aa20.93■□□□□ 0.94
MRPL55-230ENST00000489430 STX6O43752 255 aa20.93■□□□□ 0.94
MRPL55-230ENST00000489430 PLA2G4BP0C869 781 aa20.93■□□□□ 0.94
MRPL55-230ENST00000489430 CTSAP10619 480 aa20.93■□□□□ 0.94
MRPL55-230ENST00000489430 DLX2Q07687 328 aaPredicted RBP20.93■□□□□ 0.94
MRPL55-230ENST00000489430 MAPK7Q13164 816 aa20.93■□□□□ 0.94
MRPL55-230ENST00000489430 PTPAQ15257 358 aa20.93■□□□□ 0.94
MRPL55-230ENST00000489430 SMAD2Q15796 467 aaKnown RBP20.93■□□□□ 0.94
MRPL55-230ENST00000489430 TMEM132AQ24JP5 1023 aa20.93■□□□□ 0.94
MRPL55-230ENST00000489430 TMEM173Q86WV6 379 aaPredicted RBP20.93■□□□□ 0.94
MRPL55-230ENST00000489430 HSCBQ8IWL3 235 aa20.93■□□□□ 0.94
MRPL55-230ENST00000489430 FAM178BQ8IXR5 827 aa20.93■□□□□ 0.94
MRPL55-230ENST00000489430 COLGALT2Q8IYK4 626 aa20.93■□□□□ 0.94
MRPL55-230ENST00000489430 VPS52Q8N1B4 723 aa20.93■□□□□ 0.94
MRPL55-230ENST00000489430 GSTCDQ8NEC7 633 aa20.93■□□□□ 0.94
MRPL55-230ENST00000489430 KCNN1Q92952 543 aa20.93■□□□□ 0.94
MRPL55-230ENST00000489430 CCSER1Q9C0I3 900 aa20.93■□□□□ 0.94
MRPL55-230ENST00000489430 GBP3Q9H0R5 595 aa20.93■□□□□ 0.94
MRPL55-230ENST00000489430 ZBP1Q9H171 429 aa20.93■□□□□ 0.94
MRPL55-230ENST00000489430 KMT5AQ9NQR1 393 aa20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms