RNA–Protein interactions for RNA: ENST00000489378.5

SSBP1-212, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 1,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-212ENST00000489378 CNNM2Q9H8M5 875 aa10.42□□□□□ -0.74
SSBP1-212ENST00000489378 PSTPIP2Q9H939 334 aa10.42□□□□□ -0.74
SSBP1-212ENST00000489378 PIDD1Q9HB75 910 aa10.42□□□□□ -0.74
SSBP1-212ENST00000489378 AGO4Q9HCK5 861 aaKnown RBP10.42□□□□□ -0.74
SSBP1-212ENST00000489378 RAB23Q9ULC3 237 aa10.42□□□□□ -0.74
SSBP1-212ENST00000489378 PCDHA6Q9UN73 950 aa10.42□□□□□ -0.74
SSBP1-212ENST00000489378 AKT3Q9Y243 479 aa10.42□□□□□ -0.74
SSBP1-212ENST00000489378 PCDHA8Q9Y5H6 950 aa10.42□□□□□ -0.74
SSBP1-212ENST00000489378 GCN1Q92616 2671 aaKnown RBP10.42□□□□□ -0.74
SSBP1-212ENST00000489378 MTCL1Q9Y4B5 1905 aaKnown RBP10.42□□□□□ -0.74
SSBP1-212ENST00000489378 GPR37O15354 613 aa10.41□□□□□ -0.74
SSBP1-212ENST00000489378 CSDE1O75534 798 aaKnown RBP10.41□□□□□ -0.74
SSBP1-212ENST00000489378 OFD1O75665 1012 aa10.41□□□□□ -0.74
SSBP1-212ENST00000489378 PAPLNO95428 1278 aa10.41□□□□□ -0.74
SSBP1-212ENST00000489378 GLUD1P00367 558 aa10.41□□□□□ -0.74
SSBP1-212ENST00000489378 DARSP14868 501 aaKnown RBP10.41□□□□□ -0.74
SSBP1-212ENST00000489378 SLC19A1P41440 591 aa10.41□□□□□ -0.74
SSBP1-212ENST00000489378 PHKA2P46019 1235 aa10.41□□□□□ -0.74
SSBP1-212ENST00000489378 MFAP1P55081 439 aaKnown RBP10.41□□□□□ -0.74
SSBP1-212ENST00000489378 RNASELQ05823 741 aaKnown RBP10.41□□□□□ -0.74
SSBP1-212ENST00000489378 MTAPQ13126 283 aa10.41□□□□□ -0.74
SSBP1-212ENST00000489378 CSRP2Q16527 193 aa10.41□□□□□ -0.74
SSBP1-212ENST00000489378 IMMTQ16891 758 aaKnown RBP10.41□□□□□ -0.74
SSBP1-212ENST00000489378 FAM160B1Q5W0V3 765 aa10.41□□□□□ -0.74
SSBP1-212ENST00000489378 SWSAP1Q6NVH7 229 aa10.41□□□□□ -0.74
SSBP1-212ENST00000489378 GLB1LQ6UWU2 654 aa10.41□□□□□ -0.74
SSBP1-212ENST00000489378 PRR23BQ6ZRT6 265 aa10.41□□□□□ -0.74
SSBP1-212ENST00000489378 TAS1R1Q7RTX1 841 aa10.41□□□□□ -0.74
SSBP1-212ENST00000489378 LRRC71Q8N4P6 559 aa10.41□□□□□ -0.74
SSBP1-212ENST00000489378 LINC01465Q8N7H1 131 aa10.41□□□□□ -0.74
SSBP1-212ENST00000489378 RRP36Q96EU6 259 aaKnown RBP10.41□□□□□ -0.74
SSBP1-212ENST00000489378 RPS6KC1Q96S38 1066 aa10.41□□□□□ -0.74
SSBP1-212ENST00000489378 MYL10Q9BUA6 226 aa10.41□□□□□ -0.74
SSBP1-212ENST00000489378 FAM126AQ9BYI3 521 aaPredicted RBP10.41□□□□□ -0.74
SSBP1-212ENST00000489378 NT5C3AQ9H0P0 336 aa10.41□□□□□ -0.74
SSBP1-212ENST00000489378 ZNF302Q9NR11 478 aa10.41□□□□□ -0.74
SSBP1-212ENST00000489378 DACT1Q9NYF0 836 aa10.41□□□□□ -0.74
SSBP1-212ENST00000489378 MYH9P35579 1960 aaKnown RBP10.41□□□□□ -0.74
SSBP1-212ENST00000489378 CARNS1A5YM72 827 aa10.41□□□□□ -0.74
SSBP1-212ENST00000489378 SPDYE3A6NKU9 549 aa10.41□□□□□ -0.74
SSBP1-212ENST00000489378 SOBPA7XYQ1 873 aa10.41□□□□□ -0.74
SSBP1-212ENST00000489378 LRP3O75074 770 aa10.41□□□□□ -0.74
SSBP1-212ENST00000489378 DDHD2O94830 711 aa10.41□□□□□ -0.74
SSBP1-212ENST00000489378 S1PR4O95977 384 aa10.41□□□□□ -0.74
SSBP1-212ENST00000489378 ADH1AP07327 375 aa10.41□□□□□ -0.74
SSBP1-212ENST00000489378 SDSP20132 328 aa10.41□□□□□ -0.74
SSBP1-212ENST00000489378 FZD5Q13467 585 aa10.41□□□□□ -0.74
SSBP1-212ENST00000489378 EFCAB12Q6NXP0 572 aa10.41□□□□□ -0.74
SSBP1-212ENST00000489378 TICAM2Q86XR7 235 aa10.41□□□□□ -0.74
SSBP1-212ENST00000489378 CKAP2LQ8IYA6 745 aa10.41□□□□□ -0.74
SSBP1-212ENST00000489378 CELF5Q8N6W0 485 aaKnown RBP10.41□□□□□ -0.74
SSBP1-212ENST00000489378 DDX1Q92499 740 aaKnown RBP10.41□□□□□ -0.74
SSBP1-212ENST00000489378 PHKBQ93100 1093 aa10.41□□□□□ -0.74
SSBP1-212ENST00000489378 FAM217BQ9NTX9 383 aaPredicted RBP10.41□□□□□ -0.74
SSBP1-212ENST00000489378 PCDHB15Q9Y5E8 787 aa10.41□□□□□ -0.74
SSBP1-212ENST00000489378 DSPP15924 2871 aaKnown RBP10.4□□□□□ -0.74
SSBP1-212ENST00000489378 SHISA7A6NL88 538 aa10.4□□□□□ -0.75
SSBP1-212ENST00000489378 IFIT3O14879 490 aaKnown RBP10.4□□□□□ -0.75
SSBP1-212ENST00000489378 TM4SF5O14894 197 aa10.4□□□□□ -0.75
SSBP1-212ENST00000489378 SOD2P04179 222 aa10.4□□□□□ -0.75
SSBP1-212ENST00000489378 OATP04181 439 aa10.4□□□□□ -0.75
SSBP1-212ENST00000489378 URODP06132 367 aa10.4□□□□□ -0.75
SSBP1-212ENST00000489378 FECHP22830 423 aa10.4□□□□□ -0.75
SSBP1-212ENST00000489378 FSHRP23945 695 aa10.4□□□□□ -0.75
SSBP1-212ENST00000489378 RPS9P46781 194 aaKnown RBP10.4□□□□□ -0.75
SSBP1-212ENST00000489378 GPC3P51654 580 aa10.4□□□□□ -0.75
SSBP1-212ENST00000489378 AFF1P51825 1210 aaKnown RBP10.4□□□□□ -0.75
SSBP1-212ENST00000489378 IL31Q6EBC2 164 aa10.4□□□□□ -0.75
SSBP1-212ENST00000489378 ELMSAN1Q6PJG2 1045 aa10.4□□□□□ -0.75
SSBP1-212ENST00000489378 CWC27Q6UX04 472 aaKnown RBP10.4□□□□□ -0.75
SSBP1-212ENST00000489378 UNQ6494/PRO21346Q6UXR6 183 aa10.4□□□□□ -0.75
SSBP1-212ENST00000489378 RSPO2Q6UXX9 243 aaPredicted RBP10.4□□□□□ -0.75
SSBP1-212ENST00000489378 TPRG1Q6ZUI0 275 aa10.4□□□□□ -0.75
SSBP1-212ENST00000489378 METTL3Q86U44 580 aaKnown RBP10.4□□□□□ -0.75
SSBP1-212ENST00000489378 PALB2Q86YC2 1186 aa10.4□□□□□ -0.75
SSBP1-212ENST00000489378 MAP4K1Q92918 833 aa10.4□□□□□ -0.75
SSBP1-212ENST00000489378 RILPL2Q969X0 211 aa10.4□□□□□ -0.75
SSBP1-212ENST00000489378 MAP7D2Q96T17 732 aa10.4□□□□□ -0.75
SSBP1-212ENST00000489378 HERC2P3Q9BVR0 1158 aa10.4□□□□□ -0.75
SSBP1-212ENST00000489378 SPZ1Q9BXG8 430 aa10.4□□□□□ -0.75
SSBP1-212ENST00000489378 hCG_1642624A0A1W2PR95 340 aa10.39□□□□□ -0.75
SSBP1-212ENST00000489378 NCLP19338 710 aaKnown RBP10.39□□□□□ -0.75
SSBP1-212ENST00000489378 KIF5BP33176 963 aa10.39□□□□□ -0.75
SSBP1-212ENST00000489378 NTHL1P78549 312 aa10.39□□□□□ -0.75
SSBP1-212ENST00000489378 SRSF5Q13243 272 aaKnown RBP10.39□□□□□ -0.75
SSBP1-212ENST00000489378 CEP55Q53EZ4 464 aa10.39□□□□□ -0.75
SSBP1-212ENST00000489378 ANKRD45Q5TZF3 282 aa10.39□□□□□ -0.75
SSBP1-212ENST00000489378 TWF2Q6IBS0 349 aaKnown RBP10.39□□□□□ -0.75
SSBP1-212ENST00000489378 MIS18BP1Q6P0N0 1132 aa10.39□□□□□ -0.75
SSBP1-212ENST00000489378 LIAT1Q6ZQX7 453 aa10.39□□□□□ -0.75
SSBP1-212ENST00000489378 KDF1Q8NAX2 398 aaPredicted RBP10.39□□□□□ -0.75
SSBP1-212ENST00000489378 RSPH1Q8WYR4 309 aa10.39□□□□□ -0.75
SSBP1-212ENST00000489378 PGBD1Q96JS3 809 aa10.39□□□□□ -0.75
SSBP1-212ENST00000489378 SCLT1Q96NL6 688 aa10.39□□□□□ -0.75
SSBP1-212ENST00000489378 KXD1Q9BQD3 176 aa10.39□□□□□ -0.75
SSBP1-212ENST00000489378 DSCC1Q9BVC3 393 aa10.39□□□□□ -0.75
SSBP1-212ENST00000489378 TRAIPQ9BWF2 469 aa10.39□□□□□ -0.75
SSBP1-212ENST00000489378 RXFP1Q9HBX9 757 aa10.39□□□□□ -0.75
SSBP1-212ENST00000489378 MARCH5Q9NX47 278 aa10.39□□□□□ -0.75
SSBP1-212ENST00000489378 STK39Q9UEW8 545 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms