RNA–Protein interactions for RNA: ENST00000489241.1

XRN1-213, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-213ENST00000489241 SRSF2Q01130 221 aaKnown RBP5.53□□□□□ -1.52
XRN1-213ENST00000489241 TOP3AQ13472 1001 aaPredicted RBP5.53□□□□□ -1.52
XRN1-213ENST00000489241 ARHGAP29Q52LW3 1261 aa5.53□□□□□ -1.52
XRN1-213ENST00000489241 CT83Q5H943 113 aa5.53□□□□□ -1.52
XRN1-213ENST00000489241 TMEM200BQ69YZ2 307 aa5.53□□□□□ -1.52
XRN1-213ENST00000489241 TCTN3Q6NUS6 607 aa5.53□□□□□ -1.52
XRN1-213ENST00000489241 B3GNT9Q6UX72 402 aa5.53□□□□□ -1.52
XRN1-213ENST00000489241 BMP8AQ7Z5Y6 402 aa5.53□□□□□ -1.52
XRN1-213ENST00000489241 RUNDC1Q96C34 613 aa5.53□□□□□ -1.52
XRN1-213ENST00000489241 HIST1H2AHQ96KK5 128 aa5.53□□□□□ -1.52
XRN1-213ENST00000489241 GNRHR2Q96P88 292 aa5.53□□□□□ -1.52
XRN1-213ENST00000489241 HIST1H2AJQ99878 128 aa5.53□□□□□ -1.52
XRN1-213ENST00000489241 NOL10Q9BSC4 688 aaKnown RBP5.53□□□□□ -1.52
XRN1-213ENST00000489241 ZNF747Q9BV97 191 aa5.53□□□□□ -1.52
XRN1-213ENST00000489241 SARGQ9BW04 601 aa5.53□□□□□ -1.52
XRN1-213ENST00000489241 SCAND2PQ9GZW5 306 aaPredicted RBP5.53□□□□□ -1.52
XRN1-213ENST00000489241 SLC12A5Q9H2X9 1139 aa5.53□□□□□ -1.52
XRN1-213ENST00000489241 DNAJC28Q9NX36 388 aa5.53□□□□□ -1.52
XRN1-213ENST00000489241 DDX20Q9UHI6 824 aaKnown RBP5.53□□□□□ -1.52
XRN1-213ENST00000489241 RCAN3Q9UKA8 241 aa5.53□□□□□ -1.52
XRN1-213ENST00000489241 DENND2AQ9ULE3 1009 aa5.53□□□□□ -1.52
XRN1-213ENST00000489241 GPR45Q9Y5Y3 372 aa5.53□□□□□ -1.52
XRN1-213ENST00000489241 COMMD10Q9Y6G5 202 aa5.53□□□□□ -1.52
XRN1-213ENST00000489241 A0A0A6YYJ9 748 aa5.52□□□□□ -1.53
XRN1-213ENST00000489241 FOXS1O43638 330 aa5.52□□□□□ -1.53
XRN1-213ENST00000489241 CLEC2LP0C7M8 214 aa5.52□□□□□ -1.53
XRN1-213ENST00000489241 C5AR1P21730 350 aa5.52□□□□□ -1.53
XRN1-213ENST00000489241 XPAP23025 273 aaPredicted RBP5.52□□□□□ -1.53
XRN1-213ENST00000489241 AKAP5P24588 427 aa5.52□□□□□ -1.53
XRN1-213ENST00000489241 GPR15P49685 360 aa5.52□□□□□ -1.53
XRN1-213ENST00000489241 KCNQ1P51787 676 aa5.52□□□□□ -1.53
XRN1-213ENST00000489241 SESN2P58004 480 aaPredicted RBP5.52□□□□□ -1.53
XRN1-213ENST00000489241 GALEQ14376 348 aa5.52□□□□□ -1.53
XRN1-213ENST00000489241 EIF4HQ15056 248 aaKnown RBP5.52□□□□□ -1.53
XRN1-213ENST00000489241 TOR2AQ5JU69 321 aa5.52□□□□□ -1.53
XRN1-213ENST00000489241 SPDYAQ5MJ70 313 aa5.52□□□□□ -1.53
XRN1-213ENST00000489241 ZBTB41Q5SVQ8 909 aa5.52□□□□□ -1.53
XRN1-213ENST00000489241 CYB5RLQ6IPT4 315 aa5.52□□□□□ -1.53
XRN1-213ENST00000489241 UNQ6494/PRO21346Q6UXR6 183 aa5.52□□□□□ -1.53
XRN1-213ENST00000489241 KCNK18Q7Z418 384 aa5.52□□□□□ -1.53
XRN1-213ENST00000489241 RTKN2Q8IZC4 609 aa5.52□□□□□ -1.53
XRN1-213ENST00000489241 CDYL2Q8N8U2 506 aa5.52□□□□□ -1.53
XRN1-213ENST00000489241 GIMAP8Q8ND71 665 aaPredicted RBP5.52□□□□□ -1.53
XRN1-213ENST00000489241 FBXO41Q8TF61 875 aa5.52□□□□□ -1.53
XRN1-213ENST00000489241 EAF2Q96CJ1 260 aaPredicted RBP5.52□□□□□ -1.53
XRN1-213ENST00000489241 NEIL1Q96FI4 390 aaPredicted RBP5.52□□□□□ -1.53
XRN1-213ENST00000489241 RAX2Q96IS3 184 aa5.52□□□□□ -1.53
XRN1-213ENST00000489241 SORCS2Q96PQ0 1159 aa5.52□□□□□ -1.53
XRN1-213ENST00000489241 PITHD1Q9GZP4 211 aaPredicted RBP5.52□□□□□ -1.53
XRN1-213ENST00000489241 MTG2Q9H4K7 406 aa5.52□□□□□ -1.53
XRN1-213ENST00000489241 CDC42EP3Q9UKI2 254 aa5.52□□□□□ -1.53
XRN1-213ENST00000489241 USP18Q9UMW8 372 aa5.52□□□□□ -1.53
XRN1-213ENST00000489241 PTPN22Q9Y2R2 807 aa5.52□□□□□ -1.53
XRN1-213ENST00000489241 PPP2R3BQ9Y5P8 575 aa5.52□□□□□ -1.53
XRN1-213ENST00000489241 CYR61O00622 381 aa5.51□□□□□ -1.53
XRN1-213ENST00000489241 AP1G1O43747 822 aa5.51□□□□□ -1.53
XRN1-213ENST00000489241 NRP2O60462 931 aa5.51□□□□□ -1.53
XRN1-213ENST00000489241 FZD7O75084 574 aa5.51□□□□□ -1.53
XRN1-213ENST00000489241 PCDH8O95206 1070 aa5.51□□□□□ -1.53
XRN1-213ENST00000489241 HMGCRP04035 888 aa5.51□□□□□ -1.53
XRN1-213ENST00000489241 PFKMP08237 780 aa5.51□□□□□ -1.53
XRN1-213ENST00000489241 OSMP13725 252 aa5.51□□□□□ -1.53
XRN1-213ENST00000489241 MTHFD2P13995 350 aa5.51□□□□□ -1.53
XRN1-213ENST00000489241 HSPA6P17066 643 aa5.51□□□□□ -1.53
XRN1-213ENST00000489241 ETV4P43268 484 aa5.51□□□□□ -1.53
XRN1-213ENST00000489241 MEOX1P50221 254 aa5.51□□□□□ -1.53
XRN1-213ENST00000489241 RAC3P60763 192 aa5.51□□□□□ -1.53
XRN1-213ENST00000489241 MAN2A1Q16706 1144 aa5.51□□□□□ -1.53
XRN1-213ENST00000489241 CCDC178Q5BJE1 867 aa5.51□□□□□ -1.53
XRN1-213ENST00000489241 ZMAT1Q5H9K5 638 aa5.51□□□□□ -1.53
XRN1-213ENST00000489241 IFIT1BQ5T764 474 aaKnown RBP5.51□□□□□ -1.53
XRN1-213ENST00000489241 CCDC62Q6P9F0 684 aa5.51□□□□□ -1.53
XRN1-213ENST00000489241 USP51Q70EK9 711 aa5.51□□□□□ -1.53
XRN1-213ENST00000489241 PJA1Q8NG27 643 aa5.51□□□□□ -1.53
XRN1-213ENST00000489241 OR5AN1Q8NGI8 311 aa5.51□□□□□ -1.53
XRN1-213ENST00000489241 SLC35G2Q8TBE7 412 aa5.51□□□□□ -1.53
XRN1-213ENST00000489241 SSH1Q8WYL5 1049 aa5.51□□□□□ -1.53
XRN1-213ENST00000489241 SLC2A13Q96QE2 648 aa5.51□□□□□ -1.53
XRN1-213ENST00000489241 TAAR9Q96RI9 348 aa5.51□□□□□ -1.53
XRN1-213ENST00000489241 QRSL1Q9H0R6 528 aaKnown RBP5.51□□□□□ -1.53
XRN1-213ENST00000489241 NMRK2Q9NPI5 230 aa5.51□□□□□ -1.53
XRN1-213ENST00000489241 SAP30BPQ9UHR5 308 aaKnown RBP5.51□□□□□ -1.53
XRN1-213ENST00000489241 EDARQ9UNE0 448 aa5.51□□□□□ -1.53
XRN1-213ENST00000489241 ZFR2Q9UPR6 939 aaKnown RBP5.51□□□□□ -1.53
XRN1-213ENST00000489241 FRMPD2Q68DX3 1309 aaPredicted RBP5.5□□□□□ -1.53
XRN1-213ENST00000489241 OPHN1O60890 802 aa5.5□□□□□ -1.53
XRN1-213ENST00000489241 LDHAP00338 332 aaKnown RBP5.5□□□□□ -1.53
XRN1-213ENST00000489241 LPLP06858 475 aa5.5□□□□□ -1.53
XRN1-213ENST00000489241 ACVRL1P37023 503 aa5.5□□□□□ -1.53
XRN1-213ENST00000489241 ADKP55263 362 aaKnown RBP5.5□□□□□ -1.53
XRN1-213ENST00000489241 MRPS9P82933 396 aaKnown RBP5.5□□□□□ -1.53
XRN1-213ENST00000489241 OS9Q13438 667 aaPredicted RBP5.5□□□□□ -1.53
XRN1-213ENST00000489241 ZNF267Q14586 743 aaPredicted RBP5.5□□□□□ -1.53
XRN1-213ENST00000489241 BRD3Q15059 726 aa5.5□□□□□ -1.53
XRN1-213ENST00000489241 PRKD1Q15139 912 aaPredicted RBP5.5□□□□□ -1.53
XRN1-213ENST00000489241 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.5□□□□□ -1.53
XRN1-213ENST00000489241 PITRM1Q5JRX3 1037 aa5.5□□□□□ -1.53
XRN1-213ENST00000489241 IL31Q6EBC2 164 aa5.5□□□□□ -1.53
XRN1-213ENST00000489241 KLHDC10Q6PID8 442 aa5.5□□□□□ -1.53
XRN1-213ENST00000489241 TAX1BP1Q86VP1 789 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms