RNA–Protein interactions for RNA: ENST00000488989.1

CLDN11-208, Transcript of claudin 11, humanhuman

TSL 4

Gene CLDN11, Length 600 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-208ENST00000488989 SLC16A3O15427 465 aaKnown RBP17.52■□□□□ 0.4
CLDN11-208ENST00000488989 TLR3O15455 904 aaKnown RBP17.52■□□□□ 0.4
CLDN11-208ENST00000488989 TSPAN1O60635 241 aa17.52■□□□□ 0.4
CLDN11-208ENST00000488989 TOM1L1O75674 476 aa17.52■□□□□ 0.4
CLDN11-208ENST00000488989 GNA14O95837 355 aa17.52■□□□□ 0.4
CLDN11-208ENST00000488989 CKBP12277 381 aa17.52■□□□□ 0.4
CLDN11-208ENST00000488989 AXLP30530 894 aa17.52■□□□□ 0.4
CLDN11-208ENST00000488989 MRE11P49959 708 aa17.52■□□□□ 0.4
CLDN11-208ENST00000488989 SPAG1Q07617 926 aa17.52■□□□□ 0.4
CLDN11-208ENST00000488989 ARMCX5Q6P1M9 558 aa17.52■□□□□ 0.4
CLDN11-208ENST00000488989 NECAB2Q7Z6G3 386 aa17.52■□□□□ 0.4
CLDN11-208ENST00000488989 FAM114A1Q8IWE2 563 aa17.52■□□□□ 0.4
CLDN11-208ENST00000488989 BICD1Q96G01 975 aa17.52■□□□□ 0.4
CLDN11-208ENST00000488989 FBXL18Q96ME1 805 aa17.52■□□□□ 0.4
CLDN11-208ENST00000488989 A0A0B4J269 797 aa17.51■□□□□ 0.39
CLDN11-208ENST00000488989 LRRC10BA6NIK2 292 aa17.51■□□□□ 0.39
CLDN11-208ENST00000488989 MAPK13O15264 365 aa17.51■□□□□ 0.39
CLDN11-208ENST00000488989 B4GALT5O43286 388 aa17.51■□□□□ 0.39
CLDN11-208ENST00000488989 CSDE1O75534 798 aaKnown RBP17.51■□□□□ 0.39
CLDN11-208ENST00000488989 ANK1P16157 1881 aa17.51■□□□□ 0.39
CLDN11-208ENST00000488989 ARF4P18085 180 aaPredicted RBP17.51■□□□□ 0.39
CLDN11-208ENST00000488989 SFPQP23246 707 aaKnown RBP eCLIP17.51■□□□□ 0.39
CLDN11-208ENST00000488989 EEF1GP26641 437 aaKnown RBP17.51■□□□□ 0.39
CLDN11-208ENST00000488989 ATN1P54259 1190 aaPredicted RBP17.51■□□□□ 0.39
CLDN11-208ENST00000488989 MCCD1P59942 119 aaPredicted RBP17.51■□□□□ 0.39
CLDN11-208ENST00000488989 MCL1Q07820 350 aa17.51■□□□□ 0.39
CLDN11-208ENST00000488989 ATF7IP2Q5U623 682 aa17.51■□□□□ 0.39
CLDN11-208ENST00000488989 SARM1Q6SZW1 724 aa17.51■□□□□ 0.39
CLDN11-208ENST00000488989 FAM228AQ86W67 206 aa17.51■□□□□ 0.39
CLDN11-208ENST00000488989 CCDC155Q8N6L0 562 aa17.51■□□□□ 0.39
CLDN11-208ENST00000488989 XXYLT1Q8NBI6 393 aa17.51■□□□□ 0.39
CLDN11-208ENST00000488989 HAPLN2Q9GZV7 340 aa17.51■□□□□ 0.39
CLDN11-208ENST00000488989 HSPBP1Q9NZL4 362 aa17.51■□□□□ 0.39
CLDN11-208ENST00000488989 LIMA1Q9UHB6 759 aaKnown RBP17.51■□□□□ 0.39
CLDN11-208ENST00000488989 GINS2Q9Y248 185 aa17.51■□□□□ 0.39
CLDN11-208ENST00000488989 USP20Q9Y2K6 914 aa17.51■□□□□ 0.39
CLDN11-208ENST00000488989 ALPK3Q96L96 1907 aa17.51■□□□□ 0.39
CLDN11-208ENST00000488989 CITO14578 2027 aa17.5■□□□□ 0.39
CLDN11-208ENST00000488989 A0A1B0GUA9 196 aa17.5■□□□□ 0.39
CLDN11-208ENST00000488989 PITPNM1O00562 1244 aa17.5■□□□□ 0.39
CLDN11-208ENST00000488989 AKAP3O75969 853 aa17.5■□□□□ 0.39
CLDN11-208ENST00000488989 ERLIN2O94905 339 aa17.5■□□□□ 0.39
CLDN11-208ENST00000488989 CTSHP09668 335 aa17.5■□□□□ 0.39
CLDN11-208ENST00000488989 ATP1A3P13637 1013 aa17.5■□□□□ 0.39
CLDN11-208ENST00000488989 HOXA11P31270 313 aaPredicted RBP17.5■□□□□ 0.39
CLDN11-208ENST00000488989 TLE2Q04725 743 aa17.5■□□□□ 0.39
CLDN11-208ENST00000488989 BFSP2Q13515 415 aa17.5■□□□□ 0.39
CLDN11-208ENST00000488989 TRIM60Q495X7 471 aa17.5■□□□□ 0.39
CLDN11-208ENST00000488989 TCP11X2Q5H9J9 407 aa17.5■□□□□ 0.39
CLDN11-208ENST00000488989 FBXO47Q5MNV8 452 aa17.5■□□□□ 0.39
CLDN11-208ENST00000488989 ZNF618Q5T7W0 954 aa17.5■□□□□ 0.39
CLDN11-208ENST00000488989 MPZL3Q6UWV2 235 aa17.5■□□□□ 0.39
CLDN11-208ENST00000488989 CATSPER4Q7RTX7 472 aa17.5■□□□□ 0.39
CLDN11-208ENST00000488989 APTXQ7Z2E3 356 aaKnown RBP17.5■□□□□ 0.39
CLDN11-208ENST00000488989 USP38Q8NB14 1042 aa17.5■□□□□ 0.39
CLDN11-208ENST00000488989 POMGNT1Q8WZA1 660 aa17.5■□□□□ 0.39
CLDN11-208ENST00000488989 BORCS6Q96GS4 357 aa17.5■□□□□ 0.39
CLDN11-208ENST00000488989 ZBTB45Q96K62 511 aaPredicted RBP17.5■□□□□ 0.39
CLDN11-208ENST00000488989 CNOT6LQ96LI5 555 aaKnown RBP17.5■□□□□ 0.39
CLDN11-208ENST00000488989 AGPAT5Q9NUQ2 364 aa17.5■□□□□ 0.39
CLDN11-208ENST00000488989 NOC2LQ9Y3T9 749 aaKnown RBP17.5■□□□□ 0.39
CLDN11-208ENST00000488989 DCDC2CA8MYV0 355 aa17.49■□□□□ 0.39
CLDN11-208ENST00000488989 KCNJ18B7U540 433 aa17.49■□□□□ 0.39
CLDN11-208ENST00000488989 N4BP3O15049 544 aa17.49■□□□□ 0.39
CLDN11-208ENST00000488989 CLDN3O15551 220 aa17.49■□□□□ 0.39
CLDN11-208ENST00000488989 PQBP1O60828 265 aaKnown RBP17.49■□□□□ 0.39
CLDN11-208ENST00000488989 FGFR4P22455 802 aa17.49■□□□□ 0.39
CLDN11-208ENST00000488989 PSMC2P35998 433 aaKnown RBP17.49■□□□□ 0.39
CLDN11-208ENST00000488989 CASP4P49662 377 aa17.49■□□□□ 0.39
CLDN11-208ENST00000488989 CYP2J2P51589 502 aa17.49■□□□□ 0.39
CLDN11-208ENST00000488989 ENPEPQ07075 957 aa17.49■□□□□ 0.39
CLDN11-208ENST00000488989 FAAP100Q0VG06 881 aa17.49■□□□□ 0.39
CLDN11-208ENST00000488989 KCNJ12Q14500 433 aa17.49■□□□□ 0.39
CLDN11-208ENST00000488989 HSP90AA2PQ14568 343 aaPredicted RBP17.49■□□□□ 0.39
CLDN11-208ENST00000488989 EEF1DP3Q658K8 133 aa17.49■□□□□ 0.39
CLDN11-208ENST00000488989 FRMD5Q7Z6J6 570 aa17.49■□□□□ 0.39
CLDN11-208ENST00000488989 EEF2KMTQ96G04 330 aa17.49■□□□□ 0.39
CLDN11-208ENST00000488989 PCIF1Q9H4Z3 704 aa17.49■□□□□ 0.39
CLDN11-208ENST00000488989 PDZD7Q9H5P4 517 aa17.49■□□□□ 0.39
CLDN11-208ENST00000488989 METTL14Q9HCE5 456 aaKnown RBP17.49■□□□□ 0.39
CLDN11-208ENST00000488989 KIAA1586Q9HCI6 787 aa17.49■□□□□ 0.39
CLDN11-208ENST00000488989 RALGAPA2Q2PPJ7 1873 aa17.48■□□□□ 0.39
CLDN11-208ENST00000488989 TRIP11Q15643 1979 aa17.48■□□□□ 0.39
CLDN11-208ENST00000488989 AP5Z1O43299 807 aa17.48■□□□□ 0.39
CLDN11-208ENST00000488989 EXTL3O43909 919 aa17.48■□□□□ 0.39
CLDN11-208ENST00000488989 FAM189A1O60320 539 aa17.48■□□□□ 0.39
CLDN11-208ENST00000488989 EXOC3O60645 756 aa17.48■□□□□ 0.39
CLDN11-208ENST00000488989 RPS6KA5O75582 802 aa17.48■□□□□ 0.39
CLDN11-208ENST00000488989 LDHAP00338 332 aaKnown RBP17.48■□□□□ 0.39
CLDN11-208ENST00000488989 MCF2P10911 925 aa17.48■□□□□ 0.39
CLDN11-208ENST00000488989 EPB41P11171 864 aaKnown RBP17.48■□□□□ 0.39
CLDN11-208ENST00000488989 SELPP16109 830 aa17.48■□□□□ 0.39
CLDN11-208ENST00000488989 EN2P19622 333 aaPredicted RBP17.48■□□□□ 0.39
CLDN11-208ENST00000488989 CDK11BP21127 795 aaKnown RBP17.48■□□□□ 0.39
CLDN11-208ENST00000488989 FANCCQ00597 558 aa17.48■□□□□ 0.39
CLDN11-208ENST00000488989 NCBP1Q09161 790 aaKnown RBP17.48■□□□□ 0.39
CLDN11-208ENST00000488989 NOLC1Q14978 699 aaKnown RBP eCLIP17.48■□□□□ 0.39
CLDN11-208ENST00000488989 LRRC26Q2I0M4 334 aa17.48■□□□□ 0.39
CLDN11-208ENST00000488989 HSP90AA4PQ58FG1 418 aa17.48■□□□□ 0.39
CLDN11-208ENST00000488989 NOTUMQ6P988 496 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms