RNA–Protein interactions for RNA: ENST00000488920.2

CCHCR1-215, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 715 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-215ENST00000488920 CYP11B2P19099 503 aa13.23□□□□□ -0.29
CCHCR1-215ENST00000488920 CCT6AP40227 531 aaKnown RBP13.23□□□□□ -0.29
CCHCR1-215ENST00000488920 FXR2P51116 673 aaKnown RBP eCLIP13.23□□□□□ -0.29
CCHCR1-215ENST00000488920 PTGDRQ13258 359 aa13.23□□□□□ -0.29
CCHCR1-215ENST00000488920 ECM1Q16610 540 aa13.23□□□□□ -0.29
CCHCR1-215ENST00000488920 MCPH1Q8NEM0 835 aa13.23□□□□□ -0.29
CCHCR1-215ENST00000488920 SUSD6Q92537 303 aa13.23□□□□□ -0.29
CCHCR1-215ENST00000488920 RPGRIP1Q96KN7 1286 aa13.23□□□□□ -0.29
CCHCR1-215ENST00000488920 ZFP42Q96MM3 310 aa13.23□□□□□ -0.29
CCHCR1-215ENST00000488920 VN1R3Q9BXE9 311 aa13.23□□□□□ -0.29
CCHCR1-215ENST00000488920 TRIM6Q9C030 488 aaPredicted RBP13.23□□□□□ -0.29
CCHCR1-215ENST00000488920 ZBP1Q9H171 429 aa13.23□□□□□ -0.29
CCHCR1-215ENST00000488920 POLD4Q9HCU8 107 aa13.23□□□□□ -0.29
CCHCR1-215ENST00000488920 MIOSQ9NXC5 875 aa13.23□□□□□ -0.29
CCHCR1-215ENST00000488920 LRWD1Q9UFC0 647 aa13.23□□□□□ -0.29
CCHCR1-215ENST00000488920 MUTYHQ9UIF7 546 aa13.23□□□□□ -0.29
CCHCR1-215ENST00000488920 HCFC2Q9Y5Z7 792 aa13.23□□□□□ -0.29
CCHCR1-215ENST00000488920 A0A1B0GUA9 196 aa13.22□□□□□ -0.29
CCHCR1-215ENST00000488920 CARNS1A5YM72 827 aa13.22□□□□□ -0.29
CCHCR1-215ENST00000488920 LOC730098B7Z3J9 87 aa13.22□□□□□ -0.29
CCHCR1-215ENST00000488920 NRP1O14786 923 aa13.22□□□□□ -0.29
CCHCR1-215ENST00000488920 CD2BP2O95400 341 aaKnown RBP13.22□□□□□ -0.29
CCHCR1-215ENST00000488920 NPTXRO95502 500 aa13.22□□□□□ -0.29
CCHCR1-215ENST00000488920 SSBP05455 408 aaKnown RBP eCLIP13.22□□□□□ -0.29
CCHCR1-215ENST00000488920 HOXB8P17481 243 aaPredicted RBP13.22□□□□□ -0.29
CCHCR1-215ENST00000488920 AKAP5P24588 427 aa13.22□□□□□ -0.29
CCHCR1-215ENST00000488920 MLH1P40692 756 aa13.22□□□□□ -0.29
CCHCR1-215ENST00000488920 MCTP1Q6DN14 999 aa13.22□□□□□ -0.29
CCHCR1-215ENST00000488920 BSNDQ8WZ55 320 aa13.22□□□□□ -0.29
CCHCR1-215ENST00000488920 CASP10Q92851 521 aa13.22□□□□□ -0.29
CCHCR1-215ENST00000488920 TMX3Q96JJ7 454 aa13.22□□□□□ -0.29
CCHCR1-215ENST00000488920 TMEM175Q9BSA9 504 aa13.22□□□□□ -0.29
CCHCR1-215ENST00000488920 PHF7Q9BWX1 381 aaPredicted RBP13.22□□□□□ -0.29
CCHCR1-215ENST00000488920 NXF3Q9H4D5 531 aaKnown RBP13.22□□□□□ -0.29
CCHCR1-215ENST00000488920 UPF2Q9HAU5 1272 aaKnown RBP13.22□□□□□ -0.29
CCHCR1-215ENST00000488920 CDH22Q9UJ99 828 aa13.22□□□□□ -0.29
CCHCR1-215ENST00000488920 KIAA1024Q9UPX6 916 aa13.22□□□□□ -0.29
CCHCR1-215ENST00000488920 TTLL13PA6NNM8 815 aa13.21□□□□□ -0.29
CCHCR1-215ENST00000488920 LIG1P18858 919 aa13.21□□□□□ -0.29
CCHCR1-215ENST00000488920 OR1G1P47890 313 aa13.21□□□□□ -0.29
CCHCR1-215ENST00000488920 SCNN1GP51170 649 aa13.21□□□□□ -0.29
CCHCR1-215ENST00000488920 PDIA5Q14554 519 aa13.21□□□□□ -0.29
CCHCR1-215ENST00000488920 CBX2Q14781 532 aaPredicted RBP13.21□□□□□ -0.29
CCHCR1-215ENST00000488920 IL17AQ16552 155 aa13.21□□□□□ -0.29
CCHCR1-215ENST00000488920 TPRNQ4KMQ1 711 aa13.21□□□□□ -0.29
CCHCR1-215ENST00000488920 HAUS3Q68CZ6 603 aa13.21□□□□□ -0.29
CCHCR1-215ENST00000488920 KANK3Q6NY19 840 aa13.21□□□□□ -0.29
CCHCR1-215ENST00000488920 SLC27A1Q6PCB7 646 aa13.21□□□□□ -0.29
CCHCR1-215ENST00000488920 TAS1R1Q7RTX1 841 aa13.21□□□□□ -0.29
CCHCR1-215ENST00000488920 ZBTB8OSQ8IWT0 167 aa13.21□□□□□ -0.29
CCHCR1-215ENST00000488920 COLGALT2Q8IYK4 626 aa13.21□□□□□ -0.29
CCHCR1-215ENST00000488920 C12orf76Q8N812 135 aaPredicted RBP13.21□□□□□ -0.29
CCHCR1-215ENST00000488920 BHMT2Q9H2M3 363 aa13.21□□□□□ -0.29
CCHCR1-215ENST00000488920 FZD8Q9H461 694 aa13.21□□□□□ -0.29
CCHCR1-215ENST00000488920 KLK14Q9P0G3 267 aa13.21□□□□□ -0.29
CCHCR1-215ENST00000488920 PARP2Q9UGN5 583 aa13.21□□□□□ -0.29
CCHCR1-215ENST00000488920 USP20Q9Y2K6 914 aa13.21□□□□□ -0.29
CCHCR1-215ENST00000488920 GIT1Q9Y2X7 761 aa13.21□□□□□ -0.29
CCHCR1-215ENST00000488920 PRG3Q9Y2Y8 225 aaPredicted RBP13.21□□□□□ -0.29
CCHCR1-215ENST00000488920 PP2D1A8MPX8 630 aa13.2□□□□□ -0.3
CCHCR1-215ENST00000488920 PRR33A8MZF0 331 aa13.2□□□□□ -0.3
CCHCR1-215ENST00000488920 INPPL1O15357 1258 aa13.2□□□□□ -0.3
CCHCR1-215ENST00000488920 WEE2P0C1S8 567 aa13.2□□□□□ -0.3
CCHCR1-215ENST00000488920 EPCAMP16422 314 aa13.2□□□□□ -0.3
CCHCR1-215ENST00000488920 MUTP22033 750 aa13.2□□□□□ -0.3
CCHCR1-215ENST00000488920 CDC25AP30304 524 aa13.2□□□□□ -0.3
CCHCR1-215ENST00000488920 GIT2Q14161 759 aa13.2□□□□□ -0.3
CCHCR1-215ENST00000488920 PTPN14Q15678 1187 aa13.2□□□□□ -0.3
CCHCR1-215ENST00000488920 TMEM132AQ24JP5 1023 aa13.2□□□□□ -0.3
CCHCR1-215ENST00000488920 HERC4Q5GLZ8 1057 aaPredicted RBP13.2□□□□□ -0.3
CCHCR1-215ENST00000488920 CDCA2Q69YH5 1023 aaPredicted RBP13.2□□□□□ -0.3
CCHCR1-215ENST00000488920 HACE1Q8IYU2 909 aa13.2□□□□□ -0.3
CCHCR1-215ENST00000488920 DEPTORQ8TB45 409 aa13.2□□□□□ -0.3
CCHCR1-215ENST00000488920 SNX29Q8TEQ0 813 aa13.2□□□□□ -0.3
CCHCR1-215ENST00000488920 SLC22A17Q8WUG5 538 aa13.2□□□□□ -0.3
CCHCR1-215ENST00000488920 ADAM7Q9H2U9 754 aa13.2□□□□□ -0.3
CCHCR1-215ENST00000488920 DDX19AQ9NUU7 478 aaKnown RBP13.2□□□□□ -0.3
CCHCR1-215ENST00000488920 PRMT7Q9NVM4 692 aaPredicted RBP13.2□□□□□ -0.3
CCHCR1-215ENST00000488920 KIF3AQ9Y496 699 aa13.2□□□□□ -0.3
CCHCR1-215ENST00000488920 IRAK3Q9Y616 596 aa13.2□□□□□ -0.3
CCHCR1-215ENST00000488920 F8W810 466 aa13.19□□□□□ -0.3
CCHCR1-215ENST00000488920 C2CD2LO14523 706 aa13.19□□□□□ -0.3
CCHCR1-215ENST00000488920 CNPP09543 421 aaKnown RBP13.19□□□□□ -0.3
CCHCR1-215ENST00000488920 SP100P23497 879 aaPredicted RBP13.19□□□□□ -0.3
CCHCR1-215ENST00000488920 KLRC2P26717 231 aa13.19□□□□□ -0.3
CCHCR1-215ENST00000488920 GJB2P29033 226 aa13.19□□□□□ -0.3
CCHCR1-215ENST00000488920 DSC1Q08554 894 aa13.19□□□□□ -0.3
CCHCR1-215ENST00000488920 PRPF4BQ13523 1007 aaKnown RBP13.19□□□□□ -0.3
CCHCR1-215ENST00000488920 MAPK6Q16659 721 aa13.19□□□□□ -0.3
CCHCR1-215ENST00000488920 FAM187BQ17R55 369 aa13.19□□□□□ -0.3
CCHCR1-215ENST00000488920 RARS2Q5T160 578 aaKnown RBP13.19□□□□□ -0.3
CCHCR1-215ENST00000488920 CES5AQ6NT32 575 aa13.19□□□□□ -0.3
CCHCR1-215ENST00000488920 DTHD1Q6ZMT9 781 aa13.19□□□□□ -0.3
CCHCR1-215ENST00000488920 PPP4R3CPQ6ZMV5 832 aa13.19□□□□□ -0.3
CCHCR1-215ENST00000488920 IGSF22Q8N9C0 903 aa13.19□□□□□ -0.3
CCHCR1-215ENST00000488920 GSTCDQ8NEC7 633 aa13.19□□□□□ -0.3
CCHCR1-215ENST00000488920 RABGGTAQ92696 567 aa13.19□□□□□ -0.3
CCHCR1-215ENST00000488920 IFT74Q96LB3 600 aa13.19□□□□□ -0.3
CCHCR1-215ENST00000488920 PRIMPOLQ96LW4 560 aa13.19□□□□□ -0.3
CCHCR1-215ENST00000488920 KLHL5Q96PQ7 755 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms