RNA–Protein interactions for RNA: ENST00000488905.1

HDAC6-231, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 492 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-231ENST00000488905 SPDYE4A6NLX3 237 aa20.51■□□□□ 0.87
HDAC6-231ENST00000488905 NRP1O14786 923 aa20.51■□□□□ 0.87
HDAC6-231ENST00000488905 SLITRK3O94933 977 aa20.51■□□□□ 0.87
HDAC6-231ENST00000488905 LYPLA2O95372 231 aa20.51■□□□□ 0.87
HDAC6-231ENST00000488905 CNPP09543 421 aaKnown RBP20.51■□□□□ 0.87
HDAC6-231ENST00000488905 ITGA4P13612 1032 aa20.51■□□□□ 0.87
HDAC6-231ENST00000488905 AXLP30530 894 aa20.51■□□□□ 0.87
HDAC6-231ENST00000488905 CLCN4P51793 760 aa20.51■□□□□ 0.87
HDAC6-231ENST00000488905 CALCRLQ16602 461 aa20.51■□□□□ 0.87
HDAC6-231ENST00000488905 FEZF2Q8TBJ5 459 aa20.51■□□□□ 0.87
HDAC6-231ENST00000488905 GTF3C6Q969F1 213 aa20.51■□□□□ 0.87
HDAC6-231ENST00000488905 KLHL5Q96PQ7 755 aa20.51■□□□□ 0.87
HDAC6-231ENST00000488905 EIF2AQ9BY44 585 aaKnown RBP20.51■□□□□ 0.87
HDAC6-231ENST00000488905 SMOC2Q9H3U7 446 aa20.51■□□□□ 0.87
HDAC6-231ENST00000488905 MRPL17Q9NRX2 175 aaKnown RBP20.51■□□□□ 0.87
HDAC6-231ENST00000488905 MARCH5Q9NX47 278 aa20.51■□□□□ 0.87
HDAC6-231ENST00000488905 INO80B-WBP1J3KQ70 363 aa20.5■□□□□ 0.87
HDAC6-231ENST00000488905 INPPL1O15357 1258 aa20.5■□□□□ 0.87
HDAC6-231ENST00000488905 LILRB3O75022 631 aa20.5■□□□□ 0.87
HDAC6-231ENST00000488905 LARGE1O95461 756 aa20.5■□□□□ 0.87
HDAC6-231ENST00000488905 SOD2P04179 222 aa20.5■□□□□ 0.87
HDAC6-231ENST00000488905 ALDH2P05091 517 aa20.5■□□□□ 0.87
HDAC6-231ENST00000488905 URODP06132 367 aa20.5■□□□□ 0.87
HDAC6-231ENST00000488905 ASGR2P07307 311 aa20.5■□□□□ 0.87
HDAC6-231ENST00000488905 KLRC2P26717 231 aa20.5■□□□□ 0.87
HDAC6-231ENST00000488905 MLH1P40692 756 aa20.5■□□□□ 0.87
HDAC6-231ENST00000488905 CAPSQ13938 189 aa20.5■□□□□ 0.87
HDAC6-231ENST00000488905 TFDP1Q14186 410 aa20.5■□□□□ 0.87
HDAC6-231ENST00000488905 GPR149Q86SP6 731 aa20.5■□□□□ 0.87
HDAC6-231ENST00000488905 IFNLR1Q8IU57 520 aaPredicted RBP20.5■□□□□ 0.87
HDAC6-231ENST00000488905 PLCD3Q8N3E9 789 aa20.5■□□□□ 0.87
HDAC6-231ENST00000488905 NECAB1Q8N987 351 aa20.5■□□□□ 0.87
HDAC6-231ENST00000488905 ASAP3Q8TDY4 903 aa20.5■□□□□ 0.87
HDAC6-231ENST00000488905 CPB2Q96IY4 423 aa20.5■□□□□ 0.87
HDAC6-231ENST00000488905 CCDC43Q96MW1 224 aaKnown RBP20.5■□□□□ 0.87
HDAC6-231ENST00000488905 HERC2P3Q9BVR0 1158 aa20.5■□□□□ 0.87
HDAC6-231ENST00000488905 PCDHA12Q9UN75 941 aa20.5■□□□□ 0.87
HDAC6-231ENST00000488905 PRG3Q9Y2Y8 225 aaPredicted RBP20.5■□□□□ 0.87
HDAC6-231ENST00000488905 ARL5CA6NH57 179 aa20.49■□□□□ 0.87
HDAC6-231ENST00000488905 NEMFO60524 1076 aa20.49■□□□□ 0.87
HDAC6-231ENST00000488905 DGAT1O75907 488 aa20.49■□□□□ 0.87
HDAC6-231ENST00000488905 MBTD1Q05BQ5 628 aa20.49■□□□□ 0.87
HDAC6-231ENST00000488905 POU5F1BQ06416 359 aa20.49■□□□□ 0.87
HDAC6-231ENST00000488905 ME3Q16798 604 aa20.49■□□□□ 0.87
HDAC6-231ENST00000488905 CCDC149Q6ZUS6 474 aa20.49■□□□□ 0.87
HDAC6-231ENST00000488905 COLGALT2Q8IYK4 626 aa20.49■□□□□ 0.87
HDAC6-231ENST00000488905 NSUN7Q8NE18 718 aaKnown RBP20.49■□□□□ 0.87
HDAC6-231ENST00000488905 HSD17B14Q9BPX1 270 aa20.49■□□□□ 0.87
HDAC6-231ENST00000488905 CSRNP2Q9H175 543 aa20.49■□□□□ 0.87
HDAC6-231ENST00000488905 TTC12Q9H892 705 aaPredicted RBP20.49■□□□□ 0.87
HDAC6-231ENST00000488905 ANKEF1Q9NU02 776 aa20.49■□□□□ 0.87
HDAC6-231ENST00000488905 HES2Q9Y543 173 aa20.49■□□□□ 0.87
HDAC6-231ENST00000488905 WNT7AO00755 349 aa20.48■□□□□ 0.87
HDAC6-231ENST00000488905 C2CD2LO14523 706 aa20.48■□□□□ 0.87
HDAC6-231ENST00000488905 OR1G1P47890 313 aa20.48■□□□□ 0.87
HDAC6-231ENST00000488905 DSC1Q08554 894 aa20.48■□□□□ 0.87
HDAC6-231ENST00000488905 NCBP1Q09161 790 aaKnown RBP20.48■□□□□ 0.87
HDAC6-231ENST00000488905 AMHR2Q16671 573 aa20.48■□□□□ 0.87
HDAC6-231ENST00000488905 DIS3L2Q8IYB7 885 aaKnown RBP20.48■□□□□ 0.87
HDAC6-231ENST00000488905 RNF168Q8IYW5 571 aaPredicted RBP20.48■□□□□ 0.87
HDAC6-231ENST00000488905 ZFP42Q96MM3 310 aa20.48■□□□□ 0.87
HDAC6-231ENST00000488905 GAD1Q99259 594 aa20.48■□□□□ 0.87
HDAC6-231ENST00000488905 NFKBIZQ9BYH8 718 aa20.48■□□□□ 0.87
HDAC6-231ENST00000488905 RNF39Q9H2S5 420 aa20.48■□□□□ 0.87
HDAC6-231ENST00000488905 LIMD1Q9UGP4 676 aa20.48■□□□□ 0.87
HDAC6-231ENST00000488905 ARF4P18085 180 aaPredicted RBP20.47■□□□□ 0.87
HDAC6-231ENST00000488905 ARL2P36404 184 aa20.47■□□□□ 0.87
HDAC6-231ENST00000488905 RARRES1P49788 294 aa20.47■□□□□ 0.87
HDAC6-231ENST00000488905 SCNN1GP51170 649 aa20.47■□□□□ 0.87
HDAC6-231ENST00000488905 NUBP1P53384 320 aa20.47■□□□□ 0.87
HDAC6-231ENST00000488905 C15orf39Q6ZRI6 1047 aa20.47■□□□□ 0.87
HDAC6-231ENST00000488905 ACSF2Q96CM8 615 aaPredicted RBP20.47■□□□□ 0.87
HDAC6-231ENST00000488905 RPS6KC1Q96S38 1066 aa20.47■□□□□ 0.87
HDAC6-231ENST00000488905 APOL6Q9BWW8 343 aa20.47■□□□□ 0.87
HDAC6-231ENST00000488905 TRIM6Q9C030 488 aaPredicted RBP20.47■□□□□ 0.87
HDAC6-231ENST00000488905 NXF3Q9H4D5 531 aaKnown RBP20.47■□□□□ 0.87
HDAC6-231ENST00000488905 MAN1C1Q9NR34 630 aa20.47■□□□□ 0.87
HDAC6-231ENST00000488905 FAM86C1Q9NVL1 165 aa20.47■□□□□ 0.87
HDAC6-231ENST00000488905 SSX2IPQ9Y2D8 614 aa20.47■□□□□ 0.87
HDAC6-231ENST00000488905 ZFHX2Q9C0A1 2572 aaPredicted RBP20.47■□□□□ 0.87
HDAC6-231ENST00000488905 BTBD18B2RXH4 712 aa20.46■□□□□ 0.87
HDAC6-231ENST00000488905 JAK2O60674 1132 aa20.46■□□□□ 0.87
HDAC6-231ENST00000488905 EFEMP2O95967 443 aa20.46■□□□□ 0.87
HDAC6-231ENST00000488905 ADH1AP07327 375 aa20.46■□□□□ 0.87
HDAC6-231ENST00000488905 GLRA2P23416 452 aa20.46■□□□□ 0.87
HDAC6-231ENST00000488905 TXKP42681 527 aa20.46■□□□□ 0.87
HDAC6-231ENST00000488905 GLUD2P49448 558 aa20.46■□□□□ 0.87
HDAC6-231ENST00000488905 FOSBP53539 338 aa20.46■□□□□ 0.87
HDAC6-231ENST00000488905 OTOP3Q7RTS5 596 aa20.46■□□□□ 0.87
HDAC6-231ENST00000488905 HACE1Q8IYU2 909 aa20.46■□□□□ 0.87
HDAC6-231ENST00000488905 IRF2BPLQ9H1B7 796 aa20.46■□□□□ 0.87
HDAC6-231ENST00000488905 POLR3FQ9H1D9 316 aaPredicted RBP20.46■□□□□ 0.87
HDAC6-231ENST00000488905 GIT1Q9Y2X7 761 aa20.46■□□□□ 0.87
HDAC6-231ENST00000488905 ZMYM2Q9UBW7 1377 aa20.46■□□□□ 0.87
HDAC6-231ENST00000488905 POTEMA6NI47 508 aa20.45■□□□□ 0.86
HDAC6-231ENST00000488905 F8W810 466 aa20.45■□□□□ 0.86
HDAC6-231ENST00000488905 TEX28O15482 410 aa20.45■□□□□ 0.86
HDAC6-231ENST00000488905 B4GALT5O43286 388 aa20.45■□□□□ 0.86
HDAC6-231ENST00000488905 USO1O60763 962 aaKnown RBP20.45■□□□□ 0.86
HDAC6-231ENST00000488905 NEFLP07196 543 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms