RNA–Protein interactions for RNA: ENST00000488848.1

USP11-209, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 2

Gene USP11, Length 904 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-209ENST00000488848 AKT3Q9Y243 479 aa11.7□□□□□ -0.54
USP11-209ENST00000488848 RALGAPA2Q2PPJ7 1873 aa11.7□□□□□ -0.54
USP11-209ENST00000488848 A0A087WZ62 844 aa11.69□□□□□ -0.54
USP11-209ENST00000488848 A0A1B0GUA9 196 aa11.69□□□□□ -0.54
USP11-209ENST00000488848 KBTBD13C9JR72 458 aa11.69□□□□□ -0.54
USP11-209ENST00000488848 ANKRD63C9JTQ0 380 aa11.69□□□□□ -0.54
USP11-209ENST00000488848 ARVCFO00192 962 aa11.69□□□□□ -0.54
USP11-209ENST00000488848 P4HA2O15460 535 aa11.69□□□□□ -0.54
USP11-209ENST00000488848 SGPL1O95470 568 aa11.69□□□□□ -0.54
USP11-209ENST00000488848 LDHAP00338 332 aaKnown RBP11.69□□□□□ -0.54
USP11-209ENST00000488848 ADRB2P07550 413 aa11.69□□□□□ -0.54
USP11-209ENST00000488848 IQCF3P0C7M6 154 aa11.69□□□□□ -0.54
USP11-209ENST00000488848 EPB41P11171 864 aaKnown RBP11.69□□□□□ -0.54
USP11-209ENST00000488848 EIF4BP23588 611 aaKnown RBP11.69□□□□□ -0.54
USP11-209ENST00000488848 GJA8P48165 433 aa11.69□□□□□ -0.54
USP11-209ENST00000488848 UBASH3AP57075 661 aa11.69□□□□□ -0.54
USP11-209ENST00000488848 NLRP11P59045 1033 aaKnown RBP11.69□□□□□ -0.54
USP11-209ENST00000488848 MTFR1Q15390 333 aa11.69□□□□□ -0.54
USP11-209ENST00000488848 KYAT1Q16773 422 aa11.69□□□□□ -0.54
USP11-209ENST00000488848 FIGNQ5HY92 759 aa11.69□□□□□ -0.54
USP11-209ENST00000488848 RSPH3Q86UC2 560 aa11.69□□□□□ -0.54
USP11-209ENST00000488848 KSR1Q8IVT5 923 aa11.69□□□□□ -0.54
USP11-209ENST00000488848 VSTM4Q8IW00 320 aa11.69□□□□□ -0.54
USP11-209ENST00000488848 TMC2Q8TDI7 906 aa11.69□□□□□ -0.54
USP11-209ENST00000488848 SLC35C1Q96A29 364 aa11.69□□□□□ -0.54
USP11-209ENST00000488848 NAP1L5Q96NT1 182 aaPredicted RBP11.69□□□□□ -0.54
USP11-209ENST00000488848 FDXACB1Q9BRP7 624 aaPredicted RBP11.69□□□□□ -0.54
USP11-209ENST00000488848 CBWD1Q9BRT8 395 aa11.69□□□□□ -0.54
USP11-209ENST00000488848 TRAIPQ9BWF2 469 aa11.69□□□□□ -0.54
USP11-209ENST00000488848 GCOM2Q9BZD3 368 aaPredicted RBP11.69□□□□□ -0.54
USP11-209ENST00000488848 TRIM5Q9C035 493 aa11.69□□□□□ -0.54
USP11-209ENST00000488848 SENP6Q9GZR1 1112 aaPredicted RBP11.69□□□□□ -0.54
USP11-209ENST00000488848 IFNKQ9P0W0 207 aa11.69□□□□□ -0.54
USP11-209ENST00000488848 IMPACTQ9P2X3 320 aa11.69□□□□□ -0.54
USP11-209ENST00000488848 MAGEC2Q9UBF1 373 aaPredicted RBP11.69□□□□□ -0.54
USP11-209ENST00000488848 USP20Q9Y2K6 914 aa11.69□□□□□ -0.54
USP11-209ENST00000488848 DAAM1Q9Y4D1 1078 aa11.69□□□□□ -0.54
USP11-209ENST00000488848 TANC1Q9C0D5 1861 aa11.68□□□□□ -0.54
USP11-209ENST00000488848 MROH7Q68CQ1 1323 aa11.68□□□□□ -0.54
USP11-209ENST00000488848 EXTL3O43909 919 aa11.68□□□□□ -0.54
USP11-209ENST00000488848 TSPAN1O60635 241 aa11.68□□□□□ -0.54
USP11-209ENST00000488848 SERPINC1P01008 464 aa11.68□□□□□ -0.54
USP11-209ENST00000488848 VTNP04004 478 aa11.68□□□□□ -0.54
USP11-209ENST00000488848 SRGAP2CP0DJJ0 459 aa11.68□□□□□ -0.54
USP11-209ENST00000488848 MCF2P10911 925 aa11.68□□□□□ -0.54
USP11-209ENST00000488848 CDK11BP21127 795 aaKnown RBP11.68□□□□□ -0.54
USP11-209ENST00000488848 GTF2H1P32780 548 aa11.68□□□□□ -0.54
USP11-209ENST00000488848 LIG4P49917 911 aa11.68□□□□□ -0.54
USP11-209ENST00000488848 LBX1P52954 281 aa11.68□□□□□ -0.54
USP11-209ENST00000488848 MRPS6P82932 125 aaKnown RBP11.68□□□□□ -0.54
USP11-209ENST00000488848 BFSP1Q12934 665 aa11.68□□□□□ -0.54
USP11-209ENST00000488848 ARID5BQ14865 1188 aa11.68□□□□□ -0.54
USP11-209ENST00000488848 FILIP1LQ4L180 1135 aa11.68□□□□□ -0.54
USP11-209ENST00000488848 ARMCX5Q6P1M9 558 aa11.68□□□□□ -0.54
USP11-209ENST00000488848 MPZL3Q6UWV2 235 aa11.68□□□□□ -0.54
USP11-209ENST00000488848 ANKRD33Q7Z3H0 272 aa11.68□□□□□ -0.54
USP11-209ENST00000488848 FAM186BQ8IYM0 893 aa11.68□□□□□ -0.54
USP11-209ENST00000488848 GPD1LQ8N335 351 aa11.68□□□□□ -0.54
USP11-209ENST00000488848 USP38Q8NB14 1042 aa11.68□□□□□ -0.54
USP11-209ENST00000488848 CAGE1Q8TC20 777 aa11.68□□□□□ -0.54
USP11-209ENST00000488848 ZBTB10Q96DT7 871 aa11.68□□□□□ -0.54
USP11-209ENST00000488848 NLRP4Q96MN2 994 aa11.68□□□□□ -0.54
USP11-209ENST00000488848 TOX2Q96NM4 488 aa11.68□□□□□ -0.54
USP11-209ENST00000488848 DEFB118Q96PH6 123 aa11.68□□□□□ -0.54
USP11-209ENST00000488848 TARS2Q9BW92 718 aaKnown RBP11.68□□□□□ -0.54
USP11-209ENST00000488848 CELF4Q9BZC1 486 aaKnown RBP11.68□□□□□ -0.54
USP11-209ENST00000488848 HAPLN2Q9GZV7 340 aa11.68□□□□□ -0.54
USP11-209ENST00000488848 RNF208Q9H0X6 261 aa11.68□□□□□ -0.54
USP11-209ENST00000488848 IKZF4Q9H2S9 585 aa11.68□□□□□ -0.54
USP11-209ENST00000488848 NDST4Q9H3R1 872 aa11.68□□□□□ -0.54
USP11-209ENST00000488848 STARD7Q9NQZ5 370 aa11.68□□□□□ -0.54
USP11-209ENST00000488848 AGPAT5Q9NUQ2 364 aa11.68□□□□□ -0.54
USP11-209ENST00000488848 FRMD4BQ9Y2L6 1034 aa11.68□□□□□ -0.54
USP11-209ENST00000488848 TISP43B9A030 160 aa11.67□□□□□ -0.54
USP11-209ENST00000488848 PITPNM1O00562 1244 aa11.67□□□□□ -0.54
USP11-209ENST00000488848 OGTO15294 1046 aa11.67□□□□□ -0.54
USP11-209ENST00000488848 EXOC3O60645 756 aa11.67□□□□□ -0.54
USP11-209ENST00000488848 CD4P01730 458 aa11.67□□□□□ -0.54
USP11-209ENST00000488848 SFPQP23246 707 aaKnown RBP eCLIP11.67□□□□□ -0.54
USP11-209ENST00000488848 HOXA11P31270 313 aaPredicted RBP11.67□□□□□ -0.54
USP11-209ENST00000488848 CASP4P49662 377 aa11.67□□□□□ -0.54
USP11-209ENST00000488848 ZNF200P98182 395 aaPredicted RBP11.67□□□□□ -0.54
USP11-209ENST00000488848 TBX2Q13207 712 aaPredicted RBP11.67□□□□□ -0.54
USP11-209ENST00000488848 PRPF4BQ13523 1007 aaKnown RBP11.67□□□□□ -0.54
USP11-209ENST00000488848 NOLC1Q14978 699 aaKnown RBP eCLIP11.67□□□□□ -0.54
USP11-209ENST00000488848 SNRNP35Q16560 246 aaKnown RBP11.67□□□□□ -0.54
USP11-209ENST00000488848 VWA3BQ502W6 1294 aa11.67□□□□□ -0.54
USP11-209ENST00000488848 HS1BP3Q53T59 392 aa11.67□□□□□ -0.54
USP11-209ENST00000488848 ATF7IP2Q5U623 682 aa11.67□□□□□ -0.54
USP11-209ENST00000488848 TRAF7Q6Q0C0 670 aa11.67□□□□□ -0.54
USP11-209ENST00000488848 CRELD2Q6UXH1 353 aaPredicted RBP11.67□□□□□ -0.54
USP11-209ENST00000488848 USP37Q86T82 979 aa11.67□□□□□ -0.54
USP11-209ENST00000488848 BRSK2Q8IWQ3 736 aa11.67□□□□□ -0.54
USP11-209ENST00000488848 FAM126BQ8IXS8 530 aa11.67□□□□□ -0.54
USP11-209ENST00000488848 U2AF1L4Q8WU68 220 aaKnown RBP11.67□□□□□ -0.54
USP11-209ENST00000488848 DNAJB3Q8WWF6 145 aa11.67□□□□□ -0.54
USP11-209ENST00000488848 NLRP7Q8WX94 980 aa11.67□□□□□ -0.54
USP11-209ENST00000488848 DHX38Q92620 1227 aaKnown RBP11.67□□□□□ -0.54
USP11-209ENST00000488848 FBXL5Q9UKA1 691 aa11.67□□□□□ -0.54
USP11-209ENST00000488848 TRPV2Q9Y5S1 764 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms