RNA–Protein interactions for RNA: ENST00000488386.5

CDHR3-213, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 540 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-213ENST00000488386 CYP2C9P11712 490 aa6.83□□□□□ -1.32
CDHR3-213ENST00000488386 CPA1P15085 419 aa6.83□□□□□ -1.32
CDHR3-213ENST00000488386 CSF2RAP15509 400 aa6.83□□□□□ -1.32
CDHR3-213ENST00000488386 EDNRBP24530 442 aa6.83□□□□□ -1.32
CDHR3-213ENST00000488386 FPGSQ05932 587 aa6.83□□□□□ -1.32
CDHR3-213ENST00000488386 FAM160A1Q05DH4 1040 aa6.83□□□□□ -1.32
CDHR3-213ENST00000488386 RING1Q06587 406 aa6.83□□□□□ -1.32
CDHR3-213ENST00000488386 TROAPQ12815 778 aa6.83□□□□□ -1.32
CDHR3-213ENST00000488386 PPP2R5BQ15173 497 aa6.83□□□□□ -1.32
CDHR3-213ENST00000488386 ADCK5Q3MIX3 580 aa6.83□□□□□ -1.32
CDHR3-213ENST00000488386 LRIT3Q3SXY7 679 aa6.83□□□□□ -1.32
CDHR3-213ENST00000488386 FAM47CQ5HY64 1035 aa6.83□□□□□ -1.32
CDHR3-213ENST00000488386 WIPI1Q5MNZ9 446 aaPredicted RBP6.83□□□□□ -1.32
CDHR3-213ENST00000488386 ARHGEF16Q5VV41 709 aa6.83□□□□□ -1.32
CDHR3-213ENST00000488386 BNC2Q6ZN30 1099 aaPredicted RBP6.83□□□□□ -1.32
CDHR3-213ENST00000488386 NFXL1Q6ZNB6 911 aa6.83□□□□□ -1.32
CDHR3-213ENST00000488386 C16orf59Q7L2K0 433 aa6.83□□□□□ -1.32
CDHR3-213ENST00000488386 CENPQQ7L2Z9 268 aaPredicted RBP6.83□□□□□ -1.32
CDHR3-213ENST00000488386 ANKRD33Q7Z3H0 272 aa6.83□□□□□ -1.32
CDHR3-213ENST00000488386 ZNF654Q8IZM8 581 aa6.83□□□□□ -1.32
CDHR3-213ENST00000488386 MTMR8Q96EF0 704 aa6.83□□□□□ -1.32
CDHR3-213ENST00000488386 SCLYQ96I15 445 aa6.83□□□□□ -1.32
CDHR3-213ENST00000488386 RNPC3Q96LT9 517 aaKnown RBP6.83□□□□□ -1.32
CDHR3-213ENST00000488386 TMEM74Q96NL1 305 aa6.83□□□□□ -1.32
CDHR3-213ENST00000488386 RMDN3Q96TC7 470 aa6.83□□□□□ -1.32
CDHR3-213ENST00000488386 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.83□□□□□ -1.32
CDHR3-213ENST00000488386 RSRP1Q9BUV0 290 aa6.83□□□□□ -1.32
CDHR3-213ENST00000488386 AMNQ9BXJ7 453 aa6.83□□□□□ -1.32
CDHR3-213ENST00000488386 ATXN3LQ9H3M9 355 aa6.83□□□□□ -1.32
CDHR3-213ENST00000488386 BCAS3Q9H6U6 928 aa6.83□□□□□ -1.32
CDHR3-213ENST00000488386 LY9Q9HBG7 655 aa6.83□□□□□ -1.32
CDHR3-213ENST00000488386 MRPL11Q9Y3B7 192 aaKnown RBP6.83□□□□□ -1.32
CDHR3-213ENST00000488386 PCDHA1Q9Y5I3 950 aa6.83□□□□□ -1.32
CDHR3-213ENST00000488386 ELP1O95163 1332 aa6.82□□□□□ -1.32
CDHR3-213ENST00000488386 GBF1Q92538 1859 aa6.82□□□□□ -1.32
CDHR3-213ENST00000488386 TIMP1P01033 207 aa6.82□□□□□ -1.32
CDHR3-213ENST00000488386 CD4P01730 458 aa6.82□□□□□ -1.32
CDHR3-213ENST00000488386 GARTP22102 1010 aa6.82□□□□□ -1.32
CDHR3-213ENST00000488386 GBP2P32456 591 aaPredicted RBP6.82□□□□□ -1.32
CDHR3-213ENST00000488386 ADMP35318 185 aa6.82□□□□□ -1.32
CDHR3-213ENST00000488386 PURAQ00577 322 aaKnown RBP6.82□□□□□ -1.32
CDHR3-213ENST00000488386 NECTIN1Q15223 517 aa6.82□□□□□ -1.32
CDHR3-213ENST00000488386 SCARA3Q6AZY7 606 aa6.82□□□□□ -1.32
CDHR3-213ENST00000488386 CASC1Q6TDU7 716 aa6.82□□□□□ -1.32
CDHR3-213ENST00000488386 SEZ6L2Q6UXD5 910 aa6.82□□□□□ -1.32
CDHR3-213ENST00000488386 CATIPQ7Z7H3 387 aa6.82□□□□□ -1.32
CDHR3-213ENST00000488386 SRBD1Q8N5C6 995 aaKnown RBP6.82□□□□□ -1.32
CDHR3-213ENST00000488386 DNERQ8NFT8 737 aa6.82□□□□□ -1.32
CDHR3-213ENST00000488386 AFG1LQ8WV93 481 aa6.82□□□□□ -1.32
CDHR3-213ENST00000488386 ISL2Q96A47 359 aa6.82□□□□□ -1.32
CDHR3-213ENST00000488386 CCDC136Q96JN2 1154 aa6.82□□□□□ -1.32
CDHR3-213ENST00000488386 TOX2Q96NM4 488 aa6.82□□□□□ -1.32
CDHR3-213ENST00000488386 GUCD1Q96NT3 240 aa6.82□□□□□ -1.32
CDHR3-213ENST00000488386 MIR1-1HGQ9H1L0 117 aa6.82□□□□□ -1.32
CDHR3-213ENST00000488386 RIOX1Q9H6W3 641 aa6.82□□□□□ -1.32
CDHR3-213ENST00000488386 PXMP2Q9NR77 195 aa6.82□□□□□ -1.32
CDHR3-213ENST00000488386 MTMR10Q9NXD2 777 aa6.82□□□□□ -1.32
CDHR3-213ENST00000488386 GGT7Q9UJ14 662 aa6.82□□□□□ -1.32
CDHR3-213ENST00000488386 TELO2Q9Y4R8 837 aa6.82□□□□□ -1.32
CDHR3-213ENST00000488386 SCN10AQ9Y5Y9 1956 aa6.81□□□□□ -1.32
CDHR3-213ENST00000488386 CCDC69A6NI79 296 aa6.81□□□□□ -1.32
CDHR3-213ENST00000488386 TLR3O15455 904 aaKnown RBP6.81□□□□□ -1.32
CDHR3-213ENST00000488386 ZEB2O60315 1214 aa6.81□□□□□ -1.32
CDHR3-213ENST00000488386 F13A1P00488 732 aa6.81□□□□□ -1.32
CDHR3-213ENST00000488386 MMP3P08254 477 aa6.81□□□□□ -1.32
CDHR3-213ENST00000488386 ZNF286BP0CG31 522 aa6.81□□□□□ -1.32
CDHR3-213ENST00000488386 HSD17B4P51659 736 aa6.81□□□□□ -1.32
CDHR3-213ENST00000488386 NKX3-2P78367 333 aa6.81□□□□□ -1.32
CDHR3-213ENST00000488386 SP2Q02086 613 aa6.81□□□□□ -1.32
CDHR3-213ENST00000488386 LMNB2Q03252 620 aa6.81□□□□□ -1.32
CDHR3-213ENST00000488386 ARHGAP1Q07960 439 aa6.81□□□□□ -1.32
CDHR3-213ENST00000488386 CAMK2GQ13555 558 aaPredicted RBP6.81□□□□□ -1.32
CDHR3-213ENST00000488386 SART3Q15020 963 aaKnown RBP6.81□□□□□ -1.32
CDHR3-213ENST00000488386 PGM5Q15124 567 aa6.81□□□□□ -1.32
CDHR3-213ENST00000488386 NFKBIBQ15653 356 aa6.81□□□□□ -1.32
CDHR3-213ENST00000488386 BMP2KLQ5H9B9 411 aa6.81□□□□□ -1.32
CDHR3-213ENST00000488386 TMEM240Q5SV17 173 aa6.81□□□□□ -1.32
CDHR3-213ENST00000488386 MFSD5Q6N075 450 aa6.81□□□□□ -1.32
CDHR3-213ENST00000488386 CCDC62Q6P9F0 684 aa6.81□□□□□ -1.32
CDHR3-213ENST00000488386 USP17L6PQ6QN14 398 aa6.81□□□□□ -1.32
CDHR3-213ENST00000488386 ZNF365Q70YC5 407 aa6.81□□□□□ -1.32
CDHR3-213ENST00000488386 DEFB128Q7Z7B8 93 aa6.81□□□□□ -1.32
CDHR3-213ENST00000488386 MICU3Q86XE3 530 aa6.81□□□□□ -1.32
CDHR3-213ENST00000488386 MCF2L2Q86YR7 1114 aa6.81□□□□□ -1.32
CDHR3-213ENST00000488386 SLC43A3Q8NBI5 491 aa6.81□□□□□ -1.32
CDHR3-213ENST00000488386 CTCFLQ8NI51 663 aaPredicted RBP6.81□□□□□ -1.32
CDHR3-213ENST00000488386 NSUN6Q8TEA1 469 aaKnown RBP6.81□□□□□ -1.32
CDHR3-213ENST00000488386 SCFD2Q8WU76 684 aa6.81□□□□□ -1.32
CDHR3-213ENST00000488386 GATA6Q92908 595 aa6.81□□□□□ -1.32
CDHR3-213ENST00000488386 PGBD1Q96JS3 809 aa6.81□□□□□ -1.32
CDHR3-213ENST00000488386 MFSD14AQ96MC6 490 aa6.81□□□□□ -1.32
CDHR3-213ENST00000488386 PDCD2LQ9BRP1 358 aa6.81□□□□□ -1.32
CDHR3-213ENST00000488386 ALG1Q9BT22 464 aa6.81□□□□□ -1.32
CDHR3-213ENST00000488386 WNT8AQ9H1J5 351 aa6.81□□□□□ -1.32
CDHR3-213ENST00000488386 ALDH8A1Q9H2A2 487 aaPredicted RBP6.81□□□□□ -1.32
CDHR3-213ENST00000488386 TTYH1Q9H313 450 aaPredicted RBP6.81□□□□□ -1.32
CDHR3-213ENST00000488386 HIPK3Q9H422 1215 aa6.81□□□□□ -1.32
CDHR3-213ENST00000488386 PIDD1Q9HB75 910 aa6.81□□□□□ -1.32
CDHR3-213ENST00000488386 RTEL1Q9NZ71 1219 aa6.81□□□□□ -1.32
CDHR3-213ENST00000488386 Q9Y3F1 56 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms