RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 GRXCR1A8MXD5 290 aa17.27■□□□□ 0.36
C9orf3-219ENST00000488186 HOXA2O43364 376 aa17.27■□□□□ 0.36
C9orf3-219ENST00000488186 SMC2O95347 1197 aa17.27■□□□□ 0.36
C9orf3-219ENST00000488186 NPTXRO95502 500 aa17.27■□□□□ 0.36
C9orf3-219ENST00000488186 EOMESO95936 686 aa17.27■□□□□ 0.36
C9orf3-219ENST00000488186 RPN1P04843 607 aaKnown RBP17.27■□□□□ 0.36
C9orf3-219ENST00000488186 LIG4P49917 911 aa17.27■□□□□ 0.36
C9orf3-219ENST00000488186 RABGGTBP53611 331 aa17.27■□□□□ 0.36
C9orf3-219ENST00000488186 FAM189BP81408 668 aa17.27■□□□□ 0.36
C9orf3-219ENST00000488186 GTF2BQ00403 316 aa17.27■□□□□ 0.36
C9orf3-219ENST00000488186 ALCAMQ13740 583 aa17.27■□□□□ 0.36
C9orf3-219ENST00000488186 POSTNQ15063 836 aa17.27■□□□□ 0.36
C9orf3-219ENST00000488186 NT5DC1Q5TFE4 455 aa17.27■□□□□ 0.36
C9orf3-219ENST00000488186 TMCO2Q7Z6W1 182 aaPredicted RBP17.27■□□□□ 0.36
C9orf3-219ENST00000488186 CDR2LQ86X02 465 aaPredicted RBP17.27■□□□□ 0.36
C9orf3-219ENST00000488186 ECHDC2Q86YB7 292 aa17.27■□□□□ 0.36
C9orf3-219ENST00000488186 ABI1Q8IZP0 508 aa17.27■□□□□ 0.36
C9orf3-219ENST00000488186 SYCP3Q8IZU3 236 aa17.27■□□□□ 0.36
C9orf3-219ENST00000488186 HVCN1Q96D96 273 aa17.27■□□□□ 0.36
C9orf3-219ENST00000488186 ACCSQ96QU6 501 aa17.27■□□□□ 0.36
C9orf3-219ENST00000488186 RAD9AQ99638 391 aa17.27■□□□□ 0.36
C9orf3-219ENST00000488186 TARS2Q9BW92 718 aaKnown RBP17.27■□□□□ 0.36
C9orf3-219ENST00000488186 ELAC1Q9H777 363 aaKnown RBP17.27■□□□□ 0.36
C9orf3-219ENST00000488186 TMEM161AQ9NX61 479 aa17.27■□□□□ 0.36
C9orf3-219ENST00000488186 EXOC7Q9UPT5 735 aa17.27■□□□□ 0.36
C9orf3-219ENST00000488186 USP20Q9Y2K6 914 aa17.27■□□□□ 0.36
C9orf3-219ENST00000488186 INSL6Q9Y581 213 aa17.27■□□□□ 0.36
C9orf3-219ENST00000488186 PCDHB2Q9Y5E7 798 aa17.27■□□□□ 0.36
C9orf3-219ENST00000488186 GJB5O95377 273 aa17.26■□□□□ 0.35
C9orf3-219ENST00000488186 PSMD2Q13200 908 aa17.26■□□□□ 0.35
C9orf3-219ENST00000488186 ZC2HC1CQ53FD0 456 aaPredicted RBP17.26■□□□□ 0.35
C9orf3-219ENST00000488186 FAM26FQ5R3K3 315 aa17.26■□□□□ 0.35
C9orf3-219ENST00000488186 LRCH3Q96II8 777 aa17.26■□□□□ 0.35
C9orf3-219ENST00000488186 ACO2Q99798 780 aaKnown RBP17.26■□□□□ 0.35
C9orf3-219ENST00000488186 TRAIPQ9BWF2 469 aa17.26■□□□□ 0.35
C9orf3-219ENST00000488186 ST6GALNAC4Q9H4F1 302 aa17.26■□□□□ 0.35
C9orf3-219ENST00000488186 TNFSF13BQ9Y275 285 aa17.26■□□□□ 0.35
C9orf3-219ENST00000488186 HNRNPDLO14979 420 aaKnown RBP17.25■□□□□ 0.35
C9orf3-219ENST00000488186 ZNF623O75123 536 aa17.25■□□□□ 0.35
C9orf3-219ENST00000488186 PRR29P0C7W0 189 aa17.25■□□□□ 0.35
C9orf3-219ENST00000488186 MYBP10242 640 aa17.25■□□□□ 0.35
C9orf3-219ENST00000488186 ITGA4P13612 1032 aa17.25■□□□□ 0.35
C9orf3-219ENST00000488186 DNAJB2P25686 324 aa17.25■□□□□ 0.35
C9orf3-219ENST00000488186 PNOCQ13519 176 aa17.25■□□□□ 0.35
C9orf3-219ENST00000488186 DCAF4L1Q3SXM0 396 aa17.25■□□□□ 0.35
C9orf3-219ENST00000488186 KMT5BQ4FZB7 885 aa17.25■□□□□ 0.35
C9orf3-219ENST00000488186 TAS1R3Q7RTX0 852 aa17.25■□□□□ 0.35
C9orf3-219ENST00000488186 ZBTB33Q86T24 672 aa17.25■□□□□ 0.35
C9orf3-219ENST00000488186 APOL6Q9BWW8 343 aa17.25■□□□□ 0.35
C9orf3-219ENST00000488186 EIF2AQ9BY44 585 aaKnown RBP17.25■□□□□ 0.35
C9orf3-219ENST00000488186 PBX4Q9BYU1 374 aa17.25■□□□□ 0.35
C9orf3-219ENST00000488186 PDZD7Q9H5P4 517 aa17.25■□□□□ 0.35
C9orf3-219ENST00000488186 SLC39A2Q9NP94 309 aa17.25■□□□□ 0.35
C9orf3-219ENST00000488186 UBN1Q9NPG3 1134 aa17.25■□□□□ 0.35
C9orf3-219ENST00000488186 LMBRD1Q9NUN5 540 aa17.25■□□□□ 0.35
C9orf3-219ENST00000488186 RMND1Q9NWS8 449 aa17.25■□□□□ 0.35
C9orf3-219ENST00000488186 COL4A6Q14031 1691 aa17.24■□□□□ 0.35
C9orf3-219ENST00000488186 TTLL13PA6NNM8 815 aa17.24■□□□□ 0.35
C9orf3-219ENST00000488186 CLDN3O15551 220 aa17.24■□□□□ 0.35
C9orf3-219ENST00000488186 HARSP12081 509 aaKnown RBP17.24■□□□□ 0.35
C9orf3-219ENST00000488186 DPYDQ12882 1025 aa17.24■□□□□ 0.35
C9orf3-219ENST00000488186 ZNF568Q3ZCX4 644 aa17.24■□□□□ 0.35
C9orf3-219ENST00000488186 UBXN11Q5T124 520 aa17.24■□□□□ 0.35
C9orf3-219ENST00000488186 L1TD1Q5T7N2 865 aaKnown RBP17.24■□□□□ 0.35
C9orf3-219ENST00000488186 ZPBP2Q6X784 338 aa17.24■□□□□ 0.35
C9orf3-219ENST00000488186 HPS3Q969F9 1004 aa17.24■□□□□ 0.35
C9orf3-219ENST00000488186 SMARCE1Q969G3 411 aa17.24■□□□□ 0.35
C9orf3-219ENST00000488186 FIZ1Q96SL8 496 aa17.24■□□□□ 0.35
C9orf3-219ENST00000488186 TMEM206Q9H813 350 aa17.24■□□□□ 0.35
C9orf3-219ENST00000488186 ANKFY1Q9P2R3 1169 aa17.24■□□□□ 0.35
C9orf3-219ENST00000488186 PARP2Q9UGN5 583 aa17.24■□□□□ 0.35
C9orf3-219ENST00000488186 IPPQ9Y573 584 aa17.24■□□□□ 0.35
C9orf3-219ENST00000488186 TBKBP1A7MCY6 615 aa17.23■□□□□ 0.35
C9orf3-219ENST00000488186 KLRC4O43908 158 aa17.23■□□□□ 0.35
C9orf3-219ENST00000488186 TOM1L1O75674 476 aa17.23■□□□□ 0.35
C9orf3-219ENST00000488186 PRPF6O94906 941 aaKnown RBP17.23■□□□□ 0.35
C9orf3-219ENST00000488186 KIF20AO95235 890 aa17.23■□□□□ 0.35
C9orf3-219ENST00000488186 HTRA4P83105 476 aaPredicted RBP17.23■□□□□ 0.35
C9orf3-219ENST00000488186 BTG3Q14201 252 aaPredicted RBP17.23■□□□□ 0.35
C9orf3-219ENST00000488186 EEF1DP3Q658K8 133 aa17.23■□□□□ 0.35
C9orf3-219ENST00000488186 SLFN12LQ6IEE8 588 aa17.23■□□□□ 0.35
C9orf3-219ENST00000488186 GLB1LQ6UWU2 654 aa17.23■□□□□ 0.35
C9orf3-219ENST00000488186 MPZL3Q6UWV2 235 aa17.23■□□□□ 0.35
C9orf3-219ENST00000488186 MAP4K3Q8IVH8 894 aa17.23■□□□□ 0.35
C9orf3-219ENST00000488186 ELOA2Q8IYF1 753 aaPredicted RBP17.23■□□□□ 0.35
C9orf3-219ENST00000488186 CRIPAKQ8N1N5 446 aa17.23■□□□□ 0.35
C9orf3-219ENST00000488186 KCNN1Q92952 543 aa17.23■□□□□ 0.35
C9orf3-219ENST00000488186 LPPQ93052 612 aa17.23■□□□□ 0.35
C9orf3-219ENST00000488186 TIFAQ96CG3 184 aa17.23■□□□□ 0.35
C9orf3-219ENST00000488186 SLC28A3Q9HAS3 691 aa17.23■□□□□ 0.35
C9orf3-219ENST00000488186 CHD9Q3L8U1 2897 aa17.22■□□□□ 0.35
C9orf3-219ENST00000488186 EIF3DO15371 548 aaKnown RBP eCLIP17.22■□□□□ 0.35
C9orf3-219ENST00000488186 DGKIO75912 1065 aa17.22■□□□□ 0.35
C9orf3-219ENST00000488186 EDN1P05305 212 aa17.22■□□□□ 0.35
C9orf3-219ENST00000488186 MCF2P10911 925 aa17.22■□□□□ 0.35
C9orf3-219ENST00000488186 FGFR1P11362 822 aa17.22■□□□□ 0.35
C9orf3-219ENST00000488186 MYOGP15173 224 aa17.22■□□□□ 0.35
C9orf3-219ENST00000488186 PBX2P40425 430 aa17.22■□□□□ 0.35
C9orf3-219ENST00000488186 CASP5P51878 434 aa17.22■□□□□ 0.35
C9orf3-219ENST00000488186 PAN2Q504Q3 1202 aaKnown RBP17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms