RNA–Protein interactions for RNA: ENST00000488155.1

NIPAL3-207, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best)

Gene NIPAL3, Length 931 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-207ENST00000488155 ZFP42Q96MM3 310 aa12.54□□□□□ -0.4
NIPAL3-207ENST00000488155 NACC1Q96RE7 527 aa12.54□□□□□ -0.4
NIPAL3-207ENST00000488155 POLR3CQ9BUI4 534 aaPredicted RBP12.54□□□□□ -0.4
NIPAL3-207ENST00000488155 PHF7Q9BWX1 381 aaPredicted RBP12.54□□□□□ -0.4
NIPAL3-207ENST00000488155 VN1R3Q9BXE9 311 aa12.54□□□□□ -0.4
NIPAL3-207ENST00000488155 TRIM6Q9C030 488 aaPredicted RBP12.54□□□□□ -0.4
NIPAL3-207ENST00000488155 ZBP1Q9H171 429 aa12.54□□□□□ -0.4
NIPAL3-207ENST00000488155 CSRNP2Q9H175 543 aa12.54□□□□□ -0.4
NIPAL3-207ENST00000488155 NXF3Q9H4D5 531 aaKnown RBP12.54□□□□□ -0.4
NIPAL3-207ENST00000488155 KLK14Q9P0G3 267 aa12.54□□□□□ -0.4
NIPAL3-207ENST00000488155 NOL7Q9UMY1 257 aaKnown RBP12.54□□□□□ -0.4
NIPAL3-207ENST00000488155 USP20Q9Y2K6 914 aa12.54□□□□□ -0.4
NIPAL3-207ENST00000488155 FAN1Q9Y2M0 1017 aa12.54□□□□□ -0.4
NIPAL3-207ENST00000488155 CNTNAP2Q9UHC6 1331 aa12.54□□□□□ -0.4
NIPAL3-207ENST00000488155 NRP1O14786 923 aa12.53□□□□□ -0.4
NIPAL3-207ENST00000488155 ALDH2P05091 517 aa12.53□□□□□ -0.4
NIPAL3-207ENST00000488155 CTSAP10619 480 aa12.53□□□□□ -0.4
NIPAL3-207ENST00000488155 EPCAMP16422 314 aa12.53□□□□□ -0.4
NIPAL3-207ENST00000488155 AXLP30530 894 aa12.53□□□□□ -0.4
NIPAL3-207ENST00000488155 CCT6AP40227 531 aaKnown RBP12.53□□□□□ -0.4
NIPAL3-207ENST00000488155 OR1G1P47890 313 aa12.53□□□□□ -0.4
NIPAL3-207ENST00000488155 SCNN1GP51170 649 aa12.53□□□□□ -0.4
NIPAL3-207ENST00000488155 CBX2Q14781 532 aaPredicted RBP12.53□□□□□ -0.4
NIPAL3-207ENST00000488155 ECM1Q16610 540 aa12.53□□□□□ -0.4
NIPAL3-207ENST00000488155 TMEM132AQ24JP5 1023 aa12.53□□□□□ -0.4
NIPAL3-207ENST00000488155 MCTP1Q6DN14 999 aa12.53□□□□□ -0.4
NIPAL3-207ENST00000488155 PADI6Q6TGC4 694 aa12.53□□□□□ -0.4
NIPAL3-207ENST00000488155 TMEM184AQ6ZMB5 413 aa12.53□□□□□ -0.4
NIPAL3-207ENST00000488155 IFNLR1Q8IU57 520 aaPredicted RBP12.53□□□□□ -0.4
NIPAL3-207ENST00000488155 CNNM3Q8NE01 707 aa12.53□□□□□ -0.4
NIPAL3-207ENST00000488155 FEZF2Q8TBJ5 459 aa12.53□□□□□ -0.4
NIPAL3-207ENST00000488155 BSNDQ8WZ55 320 aa12.53□□□□□ -0.4
NIPAL3-207ENST00000488155 SUSD6Q92537 303 aa12.53□□□□□ -0.4
NIPAL3-207ENST00000488155 CASP10Q92851 521 aa12.53□□□□□ -0.4
NIPAL3-207ENST00000488155 S1PR5Q9H228 398 aa12.53□□□□□ -0.4
NIPAL3-207ENST00000488155 TSHZ2Q9NRE2 1034 aa12.53□□□□□ -0.4
NIPAL3-207ENST00000488155 KANSL3Q9P2N6 904 aa12.53□□□□□ -0.4
NIPAL3-207ENST00000488155 HCN4Q9Y3Q4 1203 aa12.53□□□□□ -0.4
NIPAL3-207ENST00000488155 PCDHB6Q9Y5E3 794 aa12.53□□□□□ -0.4
NIPAL3-207ENST00000488155 DENND4AQ7Z401 1863 aa12.53□□□□□ -0.4
NIPAL3-207ENST00000488155 FSD2A1L4K1 749 aa12.52□□□□□ -0.41
NIPAL3-207ENST00000488155 ARHGEF35A5YM69 484 aa12.52□□□□□ -0.41
NIPAL3-207ENST00000488155 ARL5CA6NH57 179 aa12.52□□□□□ -0.41
NIPAL3-207ENST00000488155 TTLL13PA6NNM8 815 aa12.52□□□□□ -0.41
NIPAL3-207ENST00000488155 LOC730098B7Z3J9 87 aa12.52□□□□□ -0.41
NIPAL3-207ENST00000488155 F8W810 466 aa12.52□□□□□ -0.41
NIPAL3-207ENST00000488155 C2CD2LO14523 706 aa12.52□□□□□ -0.41
NIPAL3-207ENST00000488155 MYBP10242 640 aa12.52□□□□□ -0.41
NIPAL3-207ENST00000488155 RPA1P27694 616 aa12.52□□□□□ -0.41
NIPAL3-207ENST00000488155 TOB1P50616 345 aaPredicted RBP12.52□□□□□ -0.41
NIPAL3-207ENST00000488155 POU5F1BQ06416 359 aa12.52□□□□□ -0.41
NIPAL3-207ENST00000488155 PTGDRQ13258 359 aa12.52□□□□□ -0.41
NIPAL3-207ENST00000488155 RABEP1Q15276 862 aa12.52□□□□□ -0.41
NIPAL3-207ENST00000488155 RARS2Q5T160 578 aaKnown RBP12.52□□□□□ -0.41
NIPAL3-207ENST00000488155 C4orf32Q8N8J7 132 aa12.52□□□□□ -0.41
NIPAL3-207ENST00000488155 MCPH1Q8NEM0 835 aa12.52□□□□□ -0.41
NIPAL3-207ENST00000488155 RABGGTAQ92696 567 aa12.52□□□□□ -0.41
NIPAL3-207ENST00000488155 CACNG4Q9UBN1 327 aa12.52□□□□□ -0.41
NIPAL3-207ENST00000488155 LRWD1Q9UFC0 647 aa12.52□□□□□ -0.41
NIPAL3-207ENST00000488155 PARP2Q9UGN5 583 aa12.52□□□□□ -0.41
NIPAL3-207ENST00000488155 DBR1Q9UK59 544 aaKnown RBP12.52□□□□□ -0.41
NIPAL3-207ENST00000488155 KIAA1024Q9UPX6 916 aa12.52□□□□□ -0.41
NIPAL3-207ENST00000488155 PDCD11Q14690 1871 aaKnown RBP12.51□□□□□ -0.41
NIPAL3-207ENST00000488155 SPDYE4A6NLX3 237 aa12.51□□□□□ -0.41
NIPAL3-207ENST00000488155 PRR33A8MZF0 331 aa12.51□□□□□ -0.41
NIPAL3-207ENST00000488155 ST18O60284 1047 aa12.51□□□□□ -0.41
NIPAL3-207ENST00000488155 CD2BP2O95400 341 aaKnown RBP12.51□□□□□ -0.41
NIPAL3-207ENST00000488155 CDC25AP30304 524 aa12.51□□□□□ -0.41
NIPAL3-207ENST00000488155 ORC2Q13416 577 aaPredicted RBP12.51□□□□□ -0.41
NIPAL3-207ENST00000488155 PTPN14Q15678 1187 aa12.51□□□□□ -0.41
NIPAL3-207ENST00000488155 ZRSR1Q15695 479 aaKnown RBP12.51□□□□□ -0.41
NIPAL3-207ENST00000488155 HERC4Q5GLZ8 1057 aaPredicted RBP12.51□□□□□ -0.41
NIPAL3-207ENST00000488155 HAUS3Q68CZ6 603 aa12.51□□□□□ -0.41
NIPAL3-207ENST00000488155 CES5AQ6NT32 575 aa12.51□□□□□ -0.41
NIPAL3-207ENST00000488155 SLC27A1Q6PCB7 646 aa12.51□□□□□ -0.41
NIPAL3-207ENST00000488155 TAS1R1Q7RTX1 841 aa12.51□□□□□ -0.41
NIPAL3-207ENST00000488155 ZBTB8OSQ8IWT0 167 aa12.51□□□□□ -0.41
NIPAL3-207ENST00000488155 COLGALT2Q8IYK4 626 aa12.51□□□□□ -0.41
NIPAL3-207ENST00000488155 SNX29Q8TEQ0 813 aa12.51□□□□□ -0.41
NIPAL3-207ENST00000488155 RSPH1Q8WYR4 309 aa12.51□□□□□ -0.41
NIPAL3-207ENST00000488155 CCDC51Q96ER9 411 aa12.51□□□□□ -0.41
NIPAL3-207ENST00000488155 TMEM175Q9BSA9 504 aa12.51□□□□□ -0.41
NIPAL3-207ENST00000488155 KIFC3Q9BVG8 833 aa12.51□□□□□ -0.41
NIPAL3-207ENST00000488155 BHMT2Q9H2M3 363 aa12.51□□□□□ -0.41
NIPAL3-207ENST00000488155 UBN1Q9NPG3 1134 aa12.51□□□□□ -0.41
NIPAL3-207ENST00000488155 MARCH5Q9NX47 278 aa12.51□□□□□ -0.41
NIPAL3-207ENST00000488155 ANK1P16157 1881 aa12.51□□□□□ -0.41
NIPAL3-207ENST00000488155 A0A1B0GUA9 196 aa12.5□□□□□ -0.41
NIPAL3-207ENST00000488155 PP2D1A8MPX8 630 aa12.5□□□□□ -0.41
NIPAL3-207ENST00000488155 HOXB8P17481 243 aaPredicted RBP12.5□□□□□ -0.41
NIPAL3-207ENST00000488155 CYP11B2P19099 503 aa12.5□□□□□ -0.41
NIPAL3-207ENST00000488155 U2AF2P26368 475 aaKnown RBP eCLIP12.5□□□□□ -0.41
NIPAL3-207ENST00000488155 KLRC2P26717 231 aa12.5□□□□□ -0.41
NIPAL3-207ENST00000488155 TRAPPC10P48553 1259 aa12.5□□□□□ -0.41
NIPAL3-207ENST00000488155 FXR2P51116 673 aaKnown RBP eCLIP12.5□□□□□ -0.41
NIPAL3-207ENST00000488155 PCBP1Q15365 356 aaKnown RBP eCLIP12.5□□□□□ -0.41
NIPAL3-207ENST00000488155 TPRNQ4KMQ1 711 aa12.5□□□□□ -0.41
NIPAL3-207ENST00000488155 HFE2Q6ZVN8 426 aa12.5□□□□□ -0.41
NIPAL3-207ENST00000488155 HACE1Q8IYU2 909 aa12.5□□□□□ -0.41
NIPAL3-207ENST00000488155 DEPTORQ8TB45 409 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms