RNA–Protein interactions for RNA: ENST00000488146.5

DEPDC1-203, Transcript of DEP domain containing 1, humanhuman

TSL 2

Gene DEPDC1, Length 2,658 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-203ENST00000488146 SHROOM1Q2M3G4 852 aaPredicted RBP3.1□□□□□ -1.91
DEPDC1-203ENST00000488146 UVSSAQ2YD98 709 aa3.1□□□□□ -1.91
DEPDC1-203ENST00000488146 KIAA0319Q5VV43 1072 aa3.1□□□□□ -1.91
DEPDC1-203ENST00000488146 Q6ZVU0 165 aa3.1□□□□□ -1.91
DEPDC1-203ENST00000488146 OTOP2Q7RTS6 562 aa3.1□□□□□ -1.91
DEPDC1-203ENST00000488146 ALYREFQ86V81 257 aaKnown RBP3.1□□□□□ -1.91
DEPDC1-203ENST00000488146 SGMS1Q86VZ5 419 aa3.1□□□□□ -1.91
DEPDC1-203ENST00000488146 SMC5Q8IY18 1101 aa3.1□□□□□ -1.91
DEPDC1-203ENST00000488146 RHBDD1Q8TEB9 315 aa3.1□□□□□ -1.91
DEPDC1-203ENST00000488146 GDPD5Q8WTR4 605 aa3.1□□□□□ -1.91
DEPDC1-203ENST00000488146 CCDC12Q8WUD4 166 aaPredicted RBP3.1□□□□□ -1.91
DEPDC1-203ENST00000488146 ATP6V0A1Q93050 837 aa3.1□□□□□ -1.91
DEPDC1-203ENST00000488146 NKD2Q969F2 451 aaPredicted RBP3.1□□□□□ -1.91
DEPDC1-203ENST00000488146 ALKBH8Q96BT7 664 aaKnown RBP3.1□□□□□ -1.91
DEPDC1-203ENST00000488146 ACSF2Q96CM8 615 aaPredicted RBP3.1□□□□□ -1.91
DEPDC1-203ENST00000488146 SPATA32Q96LK8 384 aa3.1□□□□□ -1.91
DEPDC1-203ENST00000488146 ZNF558Q96NG5 402 aa3.1□□□□□ -1.91
DEPDC1-203ENST00000488146 KLHL5Q96PQ7 755 aa3.1□□□□□ -1.91
DEPDC1-203ENST00000488146 FSD1Q9BTV5 496 aa3.1□□□□□ -1.91
DEPDC1-203ENST00000488146 EMILIN2Q9BXX0 1053 aa3.1□□□□□ -1.91
DEPDC1-203ENST00000488146 CELF4Q9BZC1 486 aaKnown RBP3.1□□□□□ -1.91
DEPDC1-203ENST00000488146 ZBP1Q9H171 429 aa3.1□□□□□ -1.91
DEPDC1-203ENST00000488146 RUBCNLQ9H714 662 aa3.1□□□□□ -1.91
DEPDC1-203ENST00000488146 LY9Q9HBG7 655 aa3.1□□□□□ -1.91
DEPDC1-203ENST00000488146 SRA1Q9HD15 236 aaKnown RBP3.1□□□□□ -1.91
DEPDC1-203ENST00000488146 KBTBD4Q9NVX7 518 aa3.1□□□□□ -1.91
DEPDC1-203ENST00000488146 SPG21Q9NZD8 308 aa3.1□□□□□ -1.91
DEPDC1-203ENST00000488146 KCNG1Q9UIX4 513 aa3.1□□□□□ -1.91
DEPDC1-203ENST00000488146 TLR6Q9Y2C9 796 aa3.1□□□□□ -1.91
DEPDC1-203ENST00000488146 EXOC6BQ9Y2D4 811 aa3.1□□□□□ -1.91
DEPDC1-203ENST00000488146 USP15Q9Y4E8 981 aaPredicted RBP3.1□□□□□ -1.91
DEPDC1-203ENST00000488146 PCDHGA5Q9Y5G8 931 aa3.1□□□□□ -1.91
DEPDC1-203ENST00000488146 AK5Q9Y6K8 562 aa3.1□□□□□ -1.91
DEPDC1-203ENST00000488146 MTCL1Q9Y4B5 1905 aaKnown RBP3.09□□□□□ -1.91
DEPDC1-203ENST00000488146 PLXND1Q9Y4D7 1925 aa3.09□□□□□ -1.91
DEPDC1-203ENST00000488146 KIAA1549LQ6ZVL6 1849 aa3.09□□□□□ -1.91
DEPDC1-203ENST00000488146 NFIBO00712 420 aa3.09□□□□□ -1.91
DEPDC1-203ENST00000488146 PRKAB2O43741 272 aa3.09□□□□□ -1.91
DEPDC1-203ENST00000488146 CPNE3O75131 537 aaKnown RBP3.09□□□□□ -1.91
DEPDC1-203ENST00000488146 GADD45BO75293 160 aaPredicted RBP3.09□□□□□ -1.91
DEPDC1-203ENST00000488146 TBX10O75333 385 aa3.09□□□□□ -1.91
DEPDC1-203ENST00000488146 SRFP11831 508 aa3.09□□□□□ -1.91
DEPDC1-203ENST00000488146 SNRPBP14678 240 aaKnown RBP3.09□□□□□ -1.91
DEPDC1-203ENST00000488146 IL9P15248 144 aa3.09□□□□□ -1.91
DEPDC1-203ENST00000488146 EIF4BP23588 611 aaKnown RBP3.09□□□□□ -1.91
DEPDC1-203ENST00000488146 SREBF1P36956 1147 aa3.09□□□□□ -1.91
DEPDC1-203ENST00000488146 JAK3P52333 1124 aa3.09□□□□□ -1.91
DEPDC1-203ENST00000488146 CCL23P55773 120 aa3.09□□□□□ -1.91
DEPDC1-203ENST00000488146 RRP1P56182 461 aaKnown RBP3.09□□□□□ -1.91
DEPDC1-203ENST00000488146 ELAVL2Q12926 359 aaKnown RBP3.09□□□□□ -1.91
DEPDC1-203ENST00000488146 E2F5Q15329 346 aa3.09□□□□□ -1.91
DEPDC1-203ENST00000488146 SF3A1Q15459 793 aaKnown RBP3.09□□□□□ -1.91
DEPDC1-203ENST00000488146 IMMTQ16891 758 aaKnown RBP3.09□□□□□ -1.91
DEPDC1-203ENST00000488146 QRICH1Q2TAL8 776 aa3.09□□□□□ -1.91
DEPDC1-203ENST00000488146 ALG1LQ6GMV1 187 aa3.09□□□□□ -1.91
DEPDC1-203ENST00000488146 LAIR1Q6GTX8 287 aa3.09□□□□□ -1.91
DEPDC1-203ENST00000488146 CES5AQ6NT32 575 aa3.09□□□□□ -1.91
DEPDC1-203ENST00000488146 APBB1IPQ7Z5R6 666 aaPredicted RBP3.09□□□□□ -1.91
DEPDC1-203ENST00000488146 SRGAP1Q7Z6B7 1085 aa3.09□□□□□ -1.91
DEPDC1-203ENST00000488146 ADGRF4Q8IZF3 695 aa3.09□□□□□ -1.91
DEPDC1-203ENST00000488146 DAGLBQ8NCG7 672 aa3.09□□□□□ -1.91
DEPDC1-203ENST00000488146 BICD2Q8TD16 824 aa3.09□□□□□ -1.91
DEPDC1-203ENST00000488146 CRYGNQ8WXF5 182 aa3.09□□□□□ -1.91
DEPDC1-203ENST00000488146 SPATA33Q96N06 139 aa3.09□□□□□ -1.91
DEPDC1-203ENST00000488146 UROC1Q96N76 676 aa3.09□□□□□ -1.91
DEPDC1-203ENST00000488146 CITED4Q96RK1 184 aa3.09□□□□□ -1.91
DEPDC1-203ENST00000488146 RIT2Q99578 217 aa3.09□□□□□ -1.91
DEPDC1-203ENST00000488146 IFIH1Q9BYX4 1025 aaKnown RBP3.09□□□□□ -1.91
DEPDC1-203ENST00000488146 TGIF2Q9GZN2 237 aa3.09□□□□□ -1.91
DEPDC1-203ENST00000488146 CWH43Q9H720 699 aa3.09□□□□□ -1.91
DEPDC1-203ENST00000488146 JMJD4Q9H9V9 463 aa3.09□□□□□ -1.91
DEPDC1-203ENST00000488146 CYP26B1Q9NR63 512 aa3.09□□□□□ -1.91
DEPDC1-203ENST00000488146 MRPS17Q9Y2R5 130 aaKnown RBP3.09□□□□□ -1.91
DEPDC1-203ENST00000488146 KCNMB2Q9Y691 235 aa3.09□□□□□ -1.91
DEPDC1-203ENST00000488146 NUP210Q8TEM1 1887 aaPredicted RBP3.09□□□□□ -1.91
DEPDC1-203ENST00000488146 SRCAPQ6ZRS2 3230 aa3.09□□□□□ -1.91
DEPDC1-203ENST00000488146 CYP3A7-CYP3A51PA0A087WV96 503 aa3.09□□□□□ -1.91
DEPDC1-203ENST00000488146 IGKV6-21A0A0C4DH24 114 aa3.09□□□□□ -1.91
DEPDC1-203ENST00000488146 GRXCR1A8MXD5 290 aa3.09□□□□□ -1.91
DEPDC1-203ENST00000488146 MAN2B1O00754 1011 aa3.09□□□□□ -1.91
DEPDC1-203ENST00000488146 SLC30A4O14863 429 aa3.09□□□□□ -1.91
DEPDC1-203ENST00000488146 TBX3O15119 743 aa3.09□□□□□ -1.91
DEPDC1-203ENST00000488146 NCAM2O15394 837 aa3.09□□□□□ -1.91
DEPDC1-203ENST00000488146 ECI2O75521 394 aa3.09□□□□□ -1.91
DEPDC1-203ENST00000488146 LYPLA2O95372 231 aa3.09□□□□□ -1.91
DEPDC1-203ENST00000488146 ARIH2O95376 493 aa3.09□□□□□ -1.91
DEPDC1-203ENST00000488146 HMGB1P09429 215 aaKnown RBP3.09□□□□□ -1.91
DEPDC1-203ENST00000488146 CYP2C9P11712 490 aa3.09□□□□□ -1.91
DEPDC1-203ENST00000488146 CYP3A7P24462 503 aa3.09□□□□□ -1.91
DEPDC1-203ENST00000488146 TARSP26639 723 aaKnown RBP3.09□□□□□ -1.91
DEPDC1-203ENST00000488146 HOXA13P31271 388 aaPredicted RBP3.09□□□□□ -1.91
DEPDC1-203ENST00000488146 ID4P47928 161 aa3.09□□□□□ -1.91
DEPDC1-203ENST00000488146 RABGGTBP53611 331 aa3.09□□□□□ -1.91
DEPDC1-203ENST00000488146 PSMC6P62333 389 aa3.09□□□□□ -1.91
DEPDC1-203ENST00000488146 INSM1Q01101 510 aaPredicted RBP3.09□□□□□ -1.91
DEPDC1-203ENST00000488146 PPFIA1Q13136 1202 aa3.09□□□□□ -1.91
DEPDC1-203ENST00000488146 GRIK4Q16099 956 aa3.09□□□□□ -1.91
DEPDC1-203ENST00000488146 HSF5Q4G112 596 aaPredicted RBP3.09□□□□□ -1.91
DEPDC1-203ENST00000488146 MIS18BP1Q6P0N0 1132 aa3.09□□□□□ -1.91
DEPDC1-203ENST00000488146 BTLAQ7Z6A9 289 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms