RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 SMG5Q9UPR3 1016 aaKnown RBP6.32□□□□□ -1.4
PRPF38A-203ENST00000487160 PTPN22Q9Y2R2 807 aa6.32□□□□□ -1.4
PRPF38A-203ENST00000487160 SH3D21A4FU49 640 aa6.31□□□□□ -1.4
PRPF38A-203ENST00000487160 TCAF2A6NFQ2 919 aa6.31□□□□□ -1.4
PRPF38A-203ENST00000487160 APAF1O14727 1248 aa6.31□□□□□ -1.4
PRPF38A-203ENST00000487160 FFAR3O14843 346 aa6.31□□□□□ -1.4
PRPF38A-203ENST00000487160 B3GALT2O43825 422 aa6.31□□□□□ -1.4
PRPF38A-203ENST00000487160 PHF2O75151 1096 aa6.31□□□□□ -1.4
PRPF38A-203ENST00000487160 C1QTNF9P0C862 333 aa6.31□□□□□ -1.4
PRPF38A-203ENST00000487160 ZNF888P0CJ79 500 aaPredicted RBP6.31□□□□□ -1.4
PRPF38A-203ENST00000487160 GPR155Q7Z3F1 870 aa6.31□□□□□ -1.4
PRPF38A-203ENST00000487160 REXO1L1PQ8IX06 675 aa6.31□□□□□ -1.4
PRPF38A-203ENST00000487160 TXNDC5Q8NBS9 432 aaKnown RBP6.31□□□□□ -1.4
PRPF38A-203ENST00000487160 PMM1Q92871 262 aa6.31□□□□□ -1.4
PRPF38A-203ENST00000487160 RAB24Q969Q5 203 aa6.31□□□□□ -1.4
PRPF38A-203ENST00000487160 CGRRF1Q99675 332 aa6.31□□□□□ -1.4
PRPF38A-203ENST00000487160 FAM204AQ9H8W3 233 aa6.31□□□□□ -1.4
PRPF38A-203ENST00000487160 DDX21Q9NR30 783 aaKnown RBP eCLIP6.31□□□□□ -1.4
PRPF38A-203ENST00000487160 TLR9Q9NR96 1032 aa6.31□□□□□ -1.4
PRPF38A-203ENST00000487160 ING3Q9NXR8 418 aa6.31□□□□□ -1.4
PRPF38A-203ENST00000487160 FAM50BQ9Y247 325 aa6.31□□□□□ -1.4
PRPF38A-203ENST00000487160 SIK3Q9Y2K2 1263 aa6.31□□□□□ -1.4
PRPF38A-203ENST00000487160 ZDHHC9Q9Y397 364 aa6.31□□□□□ -1.4
PRPF38A-203ENST00000487160 RBM8AQ9Y5S9 174 aaKnown RBP6.31□□□□□ -1.4
PRPF38A-203ENST00000487160 CFAP20Q9Y6A4 193 aaKnown RBP6.31□□□□□ -1.4
PRPF38A-203ENST00000487160 TPP1O14773 563 aa6.3□□□□□ -1.4
PRPF38A-203ENST00000487160 ALDH1A2O94788 518 aa6.3□□□□□ -1.4
PRPF38A-203ENST00000487160 FARP2O94887 1054 aaPredicted RBP6.3□□□□□ -1.4
PRPF38A-203ENST00000487160 ENDOD1O94919 500 aa6.3□□□□□ -1.4
PRPF38A-203ENST00000487160 RHCEP18577 417 aa6.3□□□□□ -1.4
PRPF38A-203ENST00000487160 ECHS1P30084 290 aa6.3□□□□□ -1.4
PRPF38A-203ENST00000487160 CSF2RBP32927 897 aa6.3□□□□□ -1.4
PRPF38A-203ENST00000487160 SLC6A9P48067 706 aa6.3□□□□□ -1.4
PRPF38A-203ENST00000487160 PER3P56645 1201 aa6.3□□□□□ -1.4
PRPF38A-203ENST00000487160 CAP1Q01518 475 aa6.3□□□□□ -1.4
PRPF38A-203ENST00000487160 RHDQ02161 417 aa6.3□□□□□ -1.4
PRPF38A-203ENST00000487160 HDAC1Q13547 482 aaPredicted RBP6.3□□□□□ -1.4
PRPF38A-203ENST00000487160 ACAP1Q15027 740 aa6.3□□□□□ -1.4
PRPF38A-203ENST00000487160 ZNF827Q17R98 1081 aa6.3□□□□□ -1.4
PRPF38A-203ENST00000487160 MST1LQ2TV78 715 aa6.3□□□□□ -1.4
PRPF38A-203ENST00000487160 IL31Q6EBC2 164 aa6.3□□□□□ -1.4
PRPF38A-203ENST00000487160 PPP4R3AQ6IN85 833 aa6.3□□□□□ -1.4
PRPF38A-203ENST00000487160 TTC7BQ86TV6 843 aa6.3□□□□□ -1.4
PRPF38A-203ENST00000487160 DRC7Q8IY82 874 aa6.3□□□□□ -1.4
PRPF38A-203ENST00000487160 CARFQ8N187 725 aa6.3□□□□□ -1.4
PRPF38A-203ENST00000487160 GCDHQ92947 438 aaPredicted RBP6.3□□□□□ -1.4
PRPF38A-203ENST00000487160 DACT3Q96B18 629 aaPredicted RBP6.3□□□□□ -1.4
PRPF38A-203ENST00000487160 LRFN3Q9BTN0 628 aa6.3□□□□□ -1.4
PRPF38A-203ENST00000487160 BARX1Q9HBU1 254 aaPredicted RBP6.3□□□□□ -1.4
PRPF38A-203ENST00000487160 ADAM29Q9UKF5 820 aa6.3□□□□□ -1.4
PRPF38A-203ENST00000487160 CTDP1Q9Y5B0 961 aaPredicted RBP6.3□□□□□ -1.4
PRPF38A-203ENST00000487160 ARID4BQ4LE39 1312 aaPredicted RBP6.29□□□□□ -1.4
PRPF38A-203ENST00000487160 NBPF7P0C2Y1 421 aaPredicted RBP6.29□□□□□ -1.4
PRPF38A-203ENST00000487160 HTR1BP28222 390 aa6.29□□□□□ -1.4
PRPF38A-203ENST00000487160 KIR2DL3P43628 341 aa6.29□□□□□ -1.4
PRPF38A-203ENST00000487160 MAP2K6P52564 334 aa6.29□□□□□ -1.4
PRPF38A-203ENST00000487160 USP10Q14694 798 aaKnown RBP6.29□□□□□ -1.4
PRPF38A-203ENST00000487160 SAFBQ15424 915 aaKnown RBP eCLIP6.29□□□□□ -1.4
PRPF38A-203ENST00000487160 ZNF385BQ569K4 471 aa6.29□□□□□ -1.4
PRPF38A-203ENST00000487160 MCTP1Q6DN14 999 aa6.29□□□□□ -1.4
PRPF38A-203ENST00000487160 NPNTQ6UXI9 565 aa6.29□□□□□ -1.4
PRPF38A-203ENST00000487160 CCDC149Q6ZUS6 474 aa6.29□□□□□ -1.4
PRPF38A-203ENST00000487160 SRGAP1Q7Z6B7 1085 aa6.29□□□□□ -1.4
PRPF38A-203ENST00000487160 ZDHHC14Q8IZN3 488 aa6.29□□□□□ -1.4
PRPF38A-203ENST00000487160 FAM43AQ8N2R8 423 aa6.29□□□□□ -1.4
PRPF38A-203ENST00000487160 KLHL36Q8N4N3 616 aa6.29□□□□□ -1.4
PRPF38A-203ENST00000487160 FAM156AQ8NDB6 213 aa6.29□□□□□ -1.4
PRPF38A-203ENST00000487160 SVIPQ8NHG7 77 aa6.29□□□□□ -1.4
PRPF38A-203ENST00000487160 CCHCR1Q8TD31 782 aa6.29□□□□□ -1.4
PRPF38A-203ENST00000487160 NSUN6Q8TEA1 469 aaKnown RBP6.29□□□□□ -1.4
PRPF38A-203ENST00000487160 ZNF480Q8WV37 535 aa6.29□□□□□ -1.4
PRPF38A-203ENST00000487160 RGMAQ96B86 450 aa6.29□□□□□ -1.4
PRPF38A-203ENST00000487160 SLC39A13Q96H72 371 aa6.29□□□□□ -1.4
PRPF38A-203ENST00000487160 CLPTM1LQ96KA5 538 aa6.29□□□□□ -1.4
PRPF38A-203ENST00000487160 OR10A2Q9H208 303 aa6.29□□□□□ -1.4
PRPF38A-203ENST00000487160 TMEM60Q9H2L4 133 aa6.29□□□□□ -1.4
PRPF38A-203ENST00000487160 C14orf93Q9H972 538 aaKnown RBP6.29□□□□□ -1.4
PRPF38A-203ENST00000487160 KMT5AQ9NQR1 393 aa6.29□□□□□ -1.4
PRPF38A-203ENST00000487160 TDP1Q9NUW8 608 aa6.29□□□□□ -1.4
PRPF38A-203ENST00000487160 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.29□□□□□ -1.4
PRPF38A-203ENST00000487160 USP25Q9UHP3 1055 aa6.29□□□□□ -1.4
PRPF38A-203ENST00000487160 NR2E3Q9Y5X4 410 aa6.29□□□□□ -1.4
PRPF38A-203ENST00000487160 LRRC14BA6NHZ5 514 aa6.28□□□□□ -1.4
PRPF38A-203ENST00000487160 RFXAPO00287 272 aa6.28□□□□□ -1.4
PRPF38A-203ENST00000487160 SGTAO43765 313 aa6.28□□□□□ -1.4
PRPF38A-203ENST00000487160 ZBED1O96006 694 aa6.28□□□□□ -1.4
PRPF38A-203ENST00000487160 FTLP02792 175 aaPredicted RBP6.28□□□□□ -1.4
PRPF38A-203ENST00000487160 HRGP04196 525 aa6.28□□□□□ -1.4
PRPF38A-203ENST00000487160 RPLP2P05387 115 aaKnown RBP6.28□□□□□ -1.4
PRPF38A-203ENST00000487160 SYN1P17600 705 aa6.28□□□□□ -1.4
PRPF38A-203ENST00000487160 ATP2C1P98194 919 aaPredicted RBP6.28□□□□□ -1.4
PRPF38A-203ENST00000487160 CDC42EP1Q00587 391 aa6.28□□□□□ -1.4
PRPF38A-203ENST00000487160 BIRC2Q13490 618 aa6.28□□□□□ -1.4
PRPF38A-203ENST00000487160 TBR1Q16650 682 aa6.28□□□□□ -1.4
PRPF38A-203ENST00000487160 VMACQ2NL98 169 aa6.28□□□□□ -1.4
PRPF38A-203ENST00000487160 CCDC157Q569K6 752 aa6.28□□□□□ -1.4
PRPF38A-203ENST00000487160 GJC2Q5T442 439 aaPredicted RBP6.28□□□□□ -1.4
PRPF38A-203ENST00000487160 AGBL4Q5VU57 503 aa6.28□□□□□ -1.4
PRPF38A-203ENST00000487160 USP30Q70CQ3 517 aa6.28□□□□□ -1.4
PRPF38A-203ENST00000487160 KIAA0319LQ8IZA0 1049 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms