RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 SCYL3Q8IZE3 742 aa19.42■□□□□ 0.7
PDLIM7-207ENST00000486828 ZNF233A6NK53 670 aa19.41■□□□□ 0.7
PDLIM7-207ENST00000486828 FGGP02679 453 aa19.41■□□□□ 0.7
PDLIM7-207ENST00000486828 FTLP02792 175 aaPredicted RBP19.41■□□□□ 0.7
PDLIM7-207ENST00000486828 TBC1D10BQ4KMP7 808 aaPredicted RBP19.41■□□□□ 0.7
PDLIM7-207ENST00000486828 DCAF15Q66K64 600 aa19.41■□□□□ 0.7
PDLIM7-207ENST00000486828 C11orf63Q6NUN7 778 aa19.41■□□□□ 0.7
PDLIM7-207ENST00000486828 OTUD6AQ7L8S5 288 aa19.41■□□□□ 0.7
PDLIM7-207ENST00000486828 SAMD7Q7Z3H4 446 aa19.41■□□□□ 0.7
PDLIM7-207ENST00000486828 FAM71AQ8IYT1 594 aa19.41■□□□□ 0.7
PDLIM7-207ENST00000486828 REPS2Q8NFH8 660 aa19.41■□□□□ 0.7
PDLIM7-207ENST00000486828 SPIRE2Q8WWL2 714 aa19.41■□□□□ 0.7
PDLIM7-207ENST00000486828 KIFAP3Q92845 792 aa19.41■□□□□ 0.7
PDLIM7-207ENST00000486828 KAT5Q92993 513 aa19.41■□□□□ 0.7
PDLIM7-207ENST00000486828 AS3MTQ9HBK9 375 aa19.41■□□□□ 0.7
PDLIM7-207ENST00000486828 KMT5AQ9NQR1 393 aa19.41■□□□□ 0.7
PDLIM7-207ENST00000486828 RNF181Q9P0P0 153 aa19.41■□□□□ 0.7
PDLIM7-207ENST00000486828 AMACRQ9UHK6 382 aa19.41■□□□□ 0.7
PDLIM7-207ENST00000486828 DICER1Q9UPY3 1922 aaKnown RBP19.41■□□□□ 0.7
PDLIM7-207ENST00000486828 RTN2O75298 545 aa19.41■□□□□ 0.7
PDLIM7-207ENST00000486828 KRT14P02533 472 aa19.41■□□□□ 0.7
PDLIM7-207ENST00000486828 CNGA1P29973 690 aa19.41■□□□□ 0.7
PDLIM7-207ENST00000486828 GMPSP49915 693 aaPredicted RBP19.41■□□□□ 0.7
PDLIM7-207ENST00000486828 NAP1L3Q99457 506 aaPredicted RBP19.41■□□□□ 0.7
PDLIM7-207ENST00000486828 NTPCRQ9BSD7 190 aaKnown RBP19.41■□□□□ 0.7
PDLIM7-207ENST00000486828 CAPS2Q9BXY5 557 aa19.41■□□□□ 0.7
PDLIM7-207ENST00000486828 C17orf75Q9HAS0 396 aa19.41■□□□□ 0.7
PDLIM7-207ENST00000486828 NOCTQ9UK39 431 aaKnown RBP19.41■□□□□ 0.7
PDLIM7-207ENST00000486828 DENND3A2RUS2 1198 aa19.4■□□□□ 0.7
PDLIM7-207ENST00000486828 SGPL1O95470 568 aa19.4■□□□□ 0.7
PDLIM7-207ENST00000486828 OAZ1P54368 228 aa19.4■□□□□ 0.7
PDLIM7-207ENST00000486828 MFAP3P55082 362 aa19.4■□□□□ 0.7
PDLIM7-207ENST00000486828 GPC5P78333 572 aa19.4■□□□□ 0.7
PDLIM7-207ENST00000486828 SKOR1P84550 965 aa19.4■□□□□ 0.7
PDLIM7-207ENST00000486828 POU5F1Q01860 360 aaKnown RBP19.4■□□□□ 0.7
PDLIM7-207ENST00000486828 MAP2K1Q02750 393 aaPredicted RBP19.4■□□□□ 0.7
PDLIM7-207ENST00000486828 CLUL1Q15846 466 aa19.4■□□□□ 0.7
PDLIM7-207ENST00000486828 KRT39Q6A163 491 aa19.4■□□□□ 0.7
PDLIM7-207ENST00000486828 ZNF280CQ8ND82 737 aa19.4■□□□□ 0.7
PDLIM7-207ENST00000486828 C1orf131Q8NDD1 294 aaKnown RBP19.4■□□□□ 0.7
PDLIM7-207ENST00000486828 EPS8L1Q8TE68 723 aa19.4■□□□□ 0.7
PDLIM7-207ENST00000486828 PARD3BQ8TEW8 1205 aa19.4■□□□□ 0.7
PDLIM7-207ENST00000486828 SEC14L1Q92503 715 aa19.4■□□□□ 0.7
PDLIM7-207ENST00000486828 SAAL1Q96ER3 474 aa19.4■□□□□ 0.7
PDLIM7-207ENST00000486828 RNPC3Q96LT9 517 aaKnown RBP19.4■□□□□ 0.7
PDLIM7-207ENST00000486828 KREMEN1Q96MU8 473 aa19.4■□□□□ 0.7
PDLIM7-207ENST00000486828 KIFC3Q9BVG8 833 aa19.4■□□□□ 0.7
PDLIM7-207ENST00000486828 CTTNBP2NLQ9P2B4 639 aa19.4■□□□□ 0.7
PDLIM7-207ENST00000486828 GABBR1Q9UBS5 961 aa19.4■□□□□ 0.7
PDLIM7-207ENST00000486828 ZNF112Q9UJU3 913 aa19.4■□□□□ 0.7
PDLIM7-207ENST00000486828 COQ4Q9Y3A0 265 aa19.4■□□□□ 0.7
PDLIM7-207ENST00000486828 DKC1O60832 514 aaKnown RBP eCLIP19.39■□□□□ 0.7
PDLIM7-207ENST00000486828 STBD1O95210 358 aa19.39■□□□□ 0.7
PDLIM7-207ENST00000486828 KCNA2P16389 499 aa19.39■□□□□ 0.7
PDLIM7-207ENST00000486828 CHRNB2P17787 502 aa19.39■□□□□ 0.7
PDLIM7-207ENST00000486828 USP8P40818 1118 aa19.39■□□□□ 0.7
PDLIM7-207ENST00000486828 IRAK1P51617 712 aa19.39■□□□□ 0.7
PDLIM7-207ENST00000486828 C9orf131Q5VYM1 1079 aa19.39■□□□□ 0.7
PDLIM7-207ENST00000486828 SNRNP48Q6IEG0 339 aaKnown RBP19.39■□□□□ 0.7
PDLIM7-207ENST00000486828 FOXR1Q6PIV2 292 aa19.39■□□□□ 0.7
PDLIM7-207ENST00000486828 NOP9Q86U38 636 aaKnown RBP19.39■□□□□ 0.7
PDLIM7-207ENST00000486828 DDX42Q86XP3 938 aaKnown RBP eCLIP19.39■□□□□ 0.7
PDLIM7-207ENST00000486828 TMC2Q8TDI7 906 aa19.39■□□□□ 0.7
PDLIM7-207ENST00000486828 BSNDQ8WZ55 320 aa19.39■□□□□ 0.7
PDLIM7-207ENST00000486828 SHC3Q92529 594 aa19.39■□□□□ 0.7
PDLIM7-207ENST00000486828 SEMA4DQ92854 862 aa19.39■□□□□ 0.7
PDLIM7-207ENST00000486828 ATP6V0A1Q93050 837 aa19.39■□□□□ 0.7
PDLIM7-207ENST00000486828 LRRC45Q96CN5 670 aa19.39■□□□□ 0.7
PDLIM7-207ENST00000486828 CEP170P1Q96L14 293 aa19.39■□□□□ 0.7
PDLIM7-207ENST00000486828 TMEM8AQ9HCN3 771 aa19.39■□□□□ 0.7
PDLIM7-207ENST00000486828 ZNF541Q9H0D2 1346 aa19.39■□□□□ 0.69
PDLIM7-207ENST00000486828 FAM170AA1A519 330 aa19.39■□□□□ 0.69
PDLIM7-207ENST00000486828 MIF4GDA9UHW6 222 aaKnown RBP19.39■□□□□ 0.69
PDLIM7-207ENST00000486828 TTI1O43156 1089 aa19.39■□□□□ 0.69
PDLIM7-207ENST00000486828 ZNF862O60290 1169 aa19.39■□□□□ 0.69
PDLIM7-207ENST00000486828 PPFIA4O75335 1185 aa19.39■□□□□ 0.69
PDLIM7-207ENST00000486828 GZMAP12544 262 aa19.39■□□□□ 0.69
PDLIM7-207ENST00000486828 PTPRAP18433 802 aa19.39■□□□□ 0.69
PDLIM7-207ENST00000486828 GPC3P51654 580 aa19.39■□□□□ 0.69
PDLIM7-207ENST00000486828 PTENP60484 403 aa19.39■□□□□ 0.69
PDLIM7-207ENST00000486828 PPP2R5EQ16537 467 aa19.39■□□□□ 0.69
PDLIM7-207ENST00000486828 LRIG3Q6UXM1 1119 aa19.39■□□□□ 0.69
PDLIM7-207ENST00000486828 PPM1KQ8N3J5 372 aa19.39■□□□□ 0.69
PDLIM7-207ENST00000486828 PROCA1Q8NCQ7 364 aaPredicted RBP19.39■□□□□ 0.69
PDLIM7-207ENST00000486828 NSUN6Q8TEA1 469 aaKnown RBP19.39■□□□□ 0.69
PDLIM7-207ENST00000486828 C12orf42Q96LP6 360 aa19.39■□□□□ 0.69
PDLIM7-207ENST00000486828 FBXL18Q96ME1 805 aa19.39■□□□□ 0.69
PDLIM7-207ENST00000486828 PCDHB18PQ96TA0 734 aa19.39■□□□□ 0.69
PDLIM7-207ENST00000486828 NEUROG2Q9H2A3 272 aa19.39■□□□□ 0.69
PDLIM7-207ENST00000486828 CNOT7Q9UIV1 285 aaKnown RBP19.39■□□□□ 0.69
PDLIM7-207ENST00000486828 ADAMTS5Q9UNA0 930 aa19.39■□□□□ 0.69
PDLIM7-207ENST00000486828 ALG6Q9Y672 507 aa19.39■□□□□ 0.69
PDLIM7-207ENST00000486828 RLFQ13129 1914 aa19.39■□□□□ 0.69
PDLIM7-207ENST00000486828 COL11A1P12107 1806 aaPredicted RBP19.38■□□□□ 0.69
PDLIM7-207ENST00000486828 PHIPQ8WWQ0 1821 aa19.38■□□□□ 0.69
PDLIM7-207ENST00000486828 DSG3P32926 999 aa19.38■□□□□ 0.69
PDLIM7-207ENST00000486828 PRPF4BQ13523 1007 aaKnown RBP19.38■□□□□ 0.69
PDLIM7-207ENST00000486828 SLC39A4Q6P5W5 647 aa19.38■□□□□ 0.69
PDLIM7-207ENST00000486828 CCDC127Q96BQ5 260 aa19.38■□□□□ 0.69
PDLIM7-207ENST00000486828 MFSD14AQ96MC6 490 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms