RNA–Protein interactions for RNA: ENST00000486810.5

COPS3-209, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 938 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-209ENST00000486810 MAP3K12Q12852 859 aa6.32□□□□□ -1.4
COPS3-209ENST00000486810 IFT88Q13099 833 aa6.32□□□□□ -1.4
COPS3-209ENST00000486810 STAT4Q14765 748 aa6.32□□□□□ -1.4
COPS3-209ENST00000486810 ICAM4Q14773 271 aa6.32□□□□□ -1.4
COPS3-209ENST00000486810 MAP9Q49MG5 647 aa6.32□□□□□ -1.4
COPS3-209ENST00000486810 DNAJC21Q5F1R6 531 aaKnown RBP6.32□□□□□ -1.4
COPS3-209ENST00000486810 TIGD7Q6NT04 549 aaPredicted RBP6.32□□□□□ -1.4
COPS3-209ENST00000486810 ESPNLQ6ZVH7 1005 aa6.32□□□□□ -1.4
COPS3-209ENST00000486810 CATIPQ7Z7H3 387 aa6.32□□□□□ -1.4
COPS3-209ENST00000486810 C11orf74Q86VG3 221 aa6.32□□□□□ -1.4
COPS3-209ENST00000486810 RASSF3Q86WH2 238 aa6.32□□□□□ -1.4
COPS3-209ENST00000486810 PDCL2Q8N4E4 241 aa6.32□□□□□ -1.4
COPS3-209ENST00000486810 DNERQ8NFT8 737 aa6.32□□□□□ -1.4
COPS3-209ENST00000486810 OR14K1Q8NGZ2 314 aa6.32□□□□□ -1.4
COPS3-209ENST00000486810 TNPO1Q92973 898 aaKnown RBP6.32□□□□□ -1.4
COPS3-209ENST00000486810 LRRC37BQ96QE4 947 aa6.32□□□□□ -1.4
COPS3-209ENST00000486810 LMF1Q96S06 567 aa6.32□□□□□ -1.4
COPS3-209ENST00000486810 PPP1R9BQ96SB3 815 aa6.32□□□□□ -1.4
COPS3-209ENST00000486810 DPYSL5Q9BPU6 564 aa6.32□□□□□ -1.4
COPS3-209ENST00000486810 SENP7Q9BQF6 1050 aa6.32□□□□□ -1.4
COPS3-209ENST00000486810 MMTAG2Q9BU76 263 aaKnown RBP6.32□□□□□ -1.4
COPS3-209ENST00000486810 C22orf23Q9BZE7 217 aa6.32□□□□□ -1.4
COPS3-209ENST00000486810 CWC15Q9P013 229 aaKnown RBP6.32□□□□□ -1.4
COPS3-209ENST00000486810 RSPH14Q9UHP6 348 aa6.32□□□□□ -1.4
COPS3-209ENST00000486810 DNAI1Q9UI46 699 aa6.32□□□□□ -1.4
COPS3-209ENST00000486810 APOBEC2Q9Y235 224 aaKnown RBP6.32□□□□□ -1.4
COPS3-209ENST00000486810 MYPNQ86TC9 1320 aa6.31□□□□□ -1.4
COPS3-209ENST00000486810 K7ESM1 405 aa6.31□□□□□ -1.4
COPS3-209ENST00000486810 PRRG2O14669 202 aa6.31□□□□□ -1.4
COPS3-209ENST00000486810 KDM1AO60341 852 aa6.31□□□□□ -1.4
COPS3-209ENST00000486810 PEX14O75381 377 aa6.31□□□□□ -1.4
COPS3-209ENST00000486810 CLEC2LP0C7M8 214 aa6.31□□□□□ -1.4
COPS3-209ENST00000486810 TRPC1P48995 793 aa6.31□□□□□ -1.4
COPS3-209ENST00000486810 MEOX1P50221 254 aa6.31□□□□□ -1.4
COPS3-209ENST00000486810 POU5F1Q01860 360 aaKnown RBP6.31□□□□□ -1.4
COPS3-209ENST00000486810 FILIP1LQ4L180 1135 aa6.31□□□□□ -1.4
COPS3-209ENST00000486810 KLHDC10Q6PID8 442 aa6.31□□□□□ -1.4
COPS3-209ENST00000486810 FRMD7Q6ZUT3 714 aa6.31□□□□□ -1.4
COPS3-209ENST00000486810 OTUD6AQ7L8S5 288 aa6.31□□□□□ -1.4
COPS3-209ENST00000486810 SLC41A1Q8IVJ1 513 aa6.31□□□□□ -1.4
COPS3-209ENST00000486810 CMIPQ8IY22 773 aa6.31□□□□□ -1.4
COPS3-209ENST00000486810 RPGRQ92834 1020 aaKnown RBP6.31□□□□□ -1.4
COPS3-209ENST00000486810 DYDC2Q96IM9 177 aa6.31□□□□□ -1.4
COPS3-209ENST00000486810 WWC2-AS2Q96NR7 200 aa6.31□□□□□ -1.4
COPS3-209ENST00000486810 RETREG1Q9H6L5 497 aa6.31□□□□□ -1.4
COPS3-209ENST00000486810 CD248Q9HCU0 757 aa6.31□□□□□ -1.4
COPS3-209ENST00000486810 TOPORSQ9NS56 1045 aaPredicted RBP6.31□□□□□ -1.4
COPS3-209ENST00000486810 POLR3BQ9NW08 1133 aaPredicted RBP6.31□□□□□ -1.4
COPS3-209ENST00000486810 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.31□□□□□ -1.4
COPS3-209ENST00000486810 CNOT11Q9UKZ1 510 aaKnown RBP6.31□□□□□ -1.4
COPS3-209ENST00000486810 OAZ3Q9UMX2 235 aa6.31□□□□□ -1.4
COPS3-209ENST00000486810 VWA7Q9Y334 891 aa6.31□□□□□ -1.4
COPS3-209ENST00000486810 NR2E1Q9Y466 385 aa6.31□□□□□ -1.4
COPS3-209ENST00000486810 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.3□□□□□ -1.4
COPS3-209ENST00000486810 PATE3B3GLJ2 98 aa6.3□□□□□ -1.4
COPS3-209ENST00000486810 FOXS1O43638 330 aa6.3□□□□□ -1.4
COPS3-209ENST00000486810 PCDH8O95206 1070 aa6.3□□□□□ -1.4
COPS3-209ENST00000486810 HSP90AB1P08238 724 aaKnown RBP6.3□□□□□ -1.4
COPS3-209ENST00000486810 HNRNPLP14866 589 aaKnown RBP eCLIP6.3□□□□□ -1.4
COPS3-209ENST00000486810 BDNFP23560 247 aa6.3□□□□□ -1.4
COPS3-209ENST00000486810 BUD31P41223 144 aaPredicted RBP6.3□□□□□ -1.4
COPS3-209ENST00000486810 RBM5P52756 815 aaKnown RBP eCLIP6.3□□□□□ -1.4
COPS3-209ENST00000486810 INHBEP58166 350 aa6.3□□□□□ -1.4
COPS3-209ENST00000486810 RAC3P60763 192 aa6.3□□□□□ -1.4
COPS3-209ENST00000486810 NFKB2Q00653 900 aa6.3□□□□□ -1.4
COPS3-209ENST00000486810 SAFB2Q14151 953 aaKnown RBP eCLIP6.3□□□□□ -1.4
COPS3-209ENST00000486810 TRIM25Q14258 630 aaKnown RBP6.3□□□□□ -1.4
COPS3-209ENST00000486810 TCTN3Q6NUS6 607 aa6.3□□□□□ -1.4
COPS3-209ENST00000486810 GLB1LQ6UWU2 654 aa6.3□□□□□ -1.4
COPS3-209ENST00000486810 TAX1BP1Q86VP1 789 aa6.3□□□□□ -1.4
COPS3-209ENST00000486810 SUGP1Q8IWZ8 645 aaKnown RBP6.3□□□□□ -1.4
COPS3-209ENST00000486810 IQCF2Q8IXL9 164 aa6.3□□□□□ -1.4
COPS3-209ENST00000486810 MYRIPQ8NFW9 859 aa6.3□□□□□ -1.4
COPS3-209ENST00000486810 PPP1R14CQ8TAE6 165 aa6.3□□□□□ -1.4
COPS3-209ENST00000486810 ANO3Q9BYT9 981 aa6.3□□□□□ -1.4
COPS3-209ENST00000486810 IQCGQ9H095 443 aaKnown RBP6.3□□□□□ -1.4
COPS3-209ENST00000486810 DEF6Q9H4E7 631 aa6.3□□□□□ -1.4
COPS3-209ENST00000486810 AGO3Q9H9G7 860 aaKnown RBP6.3□□□□□ -1.4
COPS3-209ENST00000486810 ETAA1Q9NY74 926 aa6.3□□□□□ -1.4
COPS3-209ENST00000486810 ST6GALNAC2Q9UJ37 374 aa6.3□□□□□ -1.4
COPS3-209ENST00000486810 THRAP3Q9Y2W1 955 aaKnown RBP6.3□□□□□ -1.4
COPS3-209ENST00000486810 KANK1Q14678 1352 aa6.3□□□□□ -1.4
COPS3-209ENST00000486810 BAZ1BQ9UIG0 1483 aaKnown RBP6.29□□□□□ -1.4
COPS3-209ENST00000486810 CFAP69A5D8W1 941 aa6.29□□□□□ -1.4
COPS3-209ENST00000486810 TIMM44O43615 452 aa6.29□□□□□ -1.4
COPS3-209ENST00000486810 KIF5CO60282 957 aa6.29□□□□□ -1.4
COPS3-209ENST00000486810 BRINP1O60477 761 aa6.29□□□□□ -1.4
COPS3-209ENST00000486810 RAB11FIP3O75154 756 aa6.29□□□□□ -1.4
COPS3-209ENST00000486810 HMMRO75330 724 aa6.29□□□□□ -1.4
COPS3-209ENST00000486810 CR2P20023 1033 aa6.29□□□□□ -1.4
COPS3-209ENST00000486810 CNGA1P29973 690 aa6.29□□□□□ -1.4
COPS3-209ENST00000486810 ALDH1B1P30837 517 aa6.29□□□□□ -1.4
COPS3-209ENST00000486810 ATP2C1P98194 919 aaPredicted RBP6.29□□□□□ -1.4
COPS3-209ENST00000486810 CHAF1AQ13111 956 aaPredicted RBP6.29□□□□□ -1.4
COPS3-209ENST00000486810 ATP2B3Q16720 1220 aa6.29□□□□□ -1.4
COPS3-209ENST00000486810 C16orf87Q6PH81 154 aa6.29□□□□□ -1.4
COPS3-209ENST00000486810 HDGFL2Q7Z4V5 671 aaPredicted RBP6.29□□□□□ -1.4
COPS3-209ENST00000486810 CLEC14AQ86T13 490 aa6.29□□□□□ -1.4
COPS3-209ENST00000486810 MORC1Q86VD1 984 aa6.29□□□□□ -1.4
COPS3-209ENST00000486810 CIR1Q86X95 450 aaPredicted RBP6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms