RNA–Protein interactions for RNA: ENST00000486335.1

CCDC142-208, Transcript of coiled-coil domain containing 142, humanhuman

TSL 5

Gene CCDC142, Length 566 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC142-208ENST00000486335 SYNE3Q6ZMZ3 975 aa10.33□□□□□ -0.76
CCDC142-208ENST00000486335 NFXL1Q6ZNB6 911 aa10.33□□□□□ -0.76
CCDC142-208ENST00000486335 KSR1Q8IVT5 923 aa10.33□□□□□ -0.76
CCDC142-208ENST00000486335 ZNF687Q8N1G0 1237 aa10.33□□□□□ -0.76
CCDC142-208ENST00000486335 SMG7Q92540 1137 aaKnown RBP10.33□□□□□ -0.76
CCDC142-208ENST00000486335 GJA10Q969M2 543 aa10.33□□□□□ -0.76
CCDC142-208ENST00000486335 SH2D3AQ9BRG2 576 aa10.33□□□□□ -0.76
CCDC142-208ENST00000486335 EMILIN2Q9BXX0 1053 aa10.33□□□□□ -0.76
CCDC142-208ENST00000486335 GBP3Q9H0R5 595 aa10.33□□□□□ -0.76
CCDC142-208ENST00000486335 EPC1Q9H2F5 836 aa10.33□□□□□ -0.76
CCDC142-208ENST00000486335 RNF39Q9H2S5 420 aa10.33□□□□□ -0.76
CCDC142-208ENST00000486335 CHST7Q9NS84 486 aa10.33□□□□□ -0.76
CCDC142-208ENST00000486335 FOXD4L1Q9NU39 408 aa10.33□□□□□ -0.76
CCDC142-208ENST00000486335 DACT1Q9NYF0 836 aa10.33□□□□□ -0.76
CCDC142-208ENST00000486335 SMC3Q9UQE7 1217 aa10.33□□□□□ -0.76
CCDC142-208ENST00000486335 V9GY48 417 aaPredicted RBP10.33□□□□□ -0.76
CCDC142-208ENST00000486335 ZFYVE26Q68DK2 2539 aa10.33□□□□□ -0.76
CCDC142-208ENST00000486335 CCDC196A0A1B0GTZ2 297 aa10.32□□□□□ -0.76
CCDC142-208ENST00000486335 KANSL1LA0AUZ9 987 aa10.32□□□□□ -0.76
CCDC142-208ENST00000486335 SOD2P04179 222 aa10.32□□□□□ -0.76
CCDC142-208ENST00000486335 ALDH2P05091 517 aa10.32□□□□□ -0.76
CCDC142-208ENST00000486335 PSAPP07602 524 aa10.32□□□□□ -0.76
CCDC142-208ENST00000486335 CD72P21854 359 aa10.32□□□□□ -0.76
CCDC142-208ENST00000486335 CIITAP33076 1130 aa10.32□□□□□ -0.76
CCDC142-208ENST00000486335 CCT2P78371 535 aaKnown RBP10.32□□□□□ -0.76
CCDC142-208ENST00000486335 HMGN5P82970 282 aaKnown RBP10.32□□□□□ -0.76
CCDC142-208ENST00000486335 CSTF1Q05048 431 aaKnown RBP10.32□□□□□ -0.76
CCDC142-208ENST00000486335 STK3Q13188 491 aa10.32□□□□□ -0.76
CCDC142-208ENST00000486335 NTRK3Q16288 839 aa10.32□□□□□ -0.76
CCDC142-208ENST00000486335 TSSK4Q6SA08 328 aa10.32□□□□□ -0.76
CCDC142-208ENST00000486335 GLB1LQ6UWU2 654 aa10.32□□□□□ -0.76
CCDC142-208ENST00000486335 B3GNT9Q6UX72 402 aa10.32□□□□□ -0.76
CCDC142-208ENST00000486335 SMAP1Q8IYB5 467 aaPredicted RBP10.32□□□□□ -0.76
CCDC142-208ENST00000486335 COLGALT2Q8IYK4 626 aa10.32□□□□□ -0.76
CCDC142-208ENST00000486335 ZNF710Q8N1W2 664 aa10.32□□□□□ -0.76
CCDC142-208ENST00000486335 TMEM87AQ8NBN3 555 aa10.32□□□□□ -0.76
CCDC142-208ENST00000486335 NSUN7Q8NE18 718 aaKnown RBP10.32□□□□□ -0.76
CCDC142-208ENST00000486335 CLDN23Q96B33 292 aa10.32□□□□□ -0.76
CCDC142-208ENST00000486335 B3GALT6Q96L58 329 aa10.32□□□□□ -0.76
CCDC142-208ENST00000486335 MAP7D2Q96T17 732 aa10.32□□□□□ -0.76
CCDC142-208ENST00000486335 ZNF577Q9BSK1 485 aa10.32□□□□□ -0.76
CCDC142-208ENST00000486335 HERC2P3Q9BVR0 1158 aa10.32□□□□□ -0.76
CCDC142-208ENST00000486335 IFT122Q9HBG6 1241 aa10.32□□□□□ -0.76
CCDC142-208ENST00000486335 MRPL17Q9NRX2 175 aaKnown RBP10.32□□□□□ -0.76
CCDC142-208ENST00000486335 TBC1D22BQ9NU19 505 aa10.32□□□□□ -0.76
CCDC142-208ENST00000486335 BARHL2Q9NY43 387 aa10.32□□□□□ -0.76
CCDC142-208ENST00000486335 FBXO4Q9UKT5 387 aa10.32□□□□□ -0.76
CCDC142-208ENST00000486335 FAN1Q9Y2M0 1017 aa10.32□□□□□ -0.76
CCDC142-208ENST00000486335 PCDHB2Q9Y5E7 798 aa10.32□□□□□ -0.76
CCDC142-208ENST00000486335 MYH9P35579 1960 aaKnown RBP10.32□□□□□ -0.76
CCDC142-208ENST00000486335 FAM208BQ5VWN6 2430 aa10.32□□□□□ -0.76
CCDC142-208ENST00000486335 ASPMQ8IZT6 3477 aa10.31□□□□□ -0.76
CCDC142-208ENST00000486335 GOLGA8BA8MQT2 603 aa10.31□□□□□ -0.76
CCDC142-208ENST00000486335 NRG2O14511 850 aaPredicted RBP10.31□□□□□ -0.76
CCDC142-208ENST00000486335 SPTLC1O15269 473 aa10.31□□□□□ -0.76
CCDC142-208ENST00000486335 TGM5O43548 720 aa10.31□□□□□ -0.76
CCDC142-208ENST00000486335 HOXB3P14651 431 aaPredicted RBP10.31□□□□□ -0.76
CCDC142-208ENST00000486335 PDCP20941 246 aa10.31□□□□□ -0.76
CCDC142-208ENST00000486335 TMOD1P28289 359 aa10.31□□□□□ -0.76
CCDC142-208ENST00000486335 GJB2P29033 226 aa10.31□□□□□ -0.76
CCDC142-208ENST00000486335 ADD1P35611 737 aaKnown RBP10.31□□□□□ -0.76
CCDC142-208ENST00000486335 ADCY7P51828 1080 aa10.31□□□□□ -0.76
CCDC142-208ENST00000486335 NAPAP54920 295 aa10.31□□□□□ -0.76
CCDC142-208ENST00000486335 NTHL1P78549 312 aa10.31□□□□□ -0.76
CCDC142-208ENST00000486335 PRKCEQ02156 737 aa10.31□□□□□ -0.76
CCDC142-208ENST00000486335 DSG1Q02413 1049 aa10.31□□□□□ -0.76
CCDC142-208ENST00000486335 DSC1Q08554 894 aa10.31□□□□□ -0.76
CCDC142-208ENST00000486335 AP3B2Q13367 1082 aa10.31□□□□□ -0.76
CCDC142-208ENST00000486335 SLC44A4Q53GD3 710 aa10.31□□□□□ -0.76
CCDC142-208ENST00000486335 CLEC17AQ6ZS10 378 aa10.31□□□□□ -0.76
CCDC142-208ENST00000486335 TEX2Q8IWB9 1127 aa10.31□□□□□ -0.76
CCDC142-208ENST00000486335 SMG8Q8ND04 991 aaKnown RBP10.31□□□□□ -0.76
CCDC142-208ENST00000486335 GSTCDQ8NEC7 633 aa10.31□□□□□ -0.76
CCDC142-208ENST00000486335 NLRP7Q8WX94 980 aa10.31□□□□□ -0.76
CCDC142-208ENST00000486335 RSPH1Q8WYR4 309 aa10.31□□□□□ -0.76
CCDC142-208ENST00000486335 TMEM175Q9BSA9 504 aa10.31□□□□□ -0.76
CCDC142-208ENST00000486335 RTKNQ9BST9 563 aa10.31□□□□□ -0.76
CCDC142-208ENST00000486335 NIFKQ9BYG3 293 aaKnown RBP10.31□□□□□ -0.76
CCDC142-208ENST00000486335 GCOM2Q9BZD3 368 aaPredicted RBP10.31□□□□□ -0.76
CCDC142-208ENST00000486335 GPR62Q9BZJ7 368 aa10.31□□□□□ -0.76
CCDC142-208ENST00000486335 PRKD2Q9BZL6 878 aa10.31□□□□□ -0.76
CCDC142-208ENST00000486335 MINDY3Q9H8M7 445 aa10.31□□□□□ -0.76
CCDC142-208ENST00000486335 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.31□□□□□ -0.76
CCDC142-208ENST00000486335 CEP131Q9UPN4 1083 aa10.31□□□□□ -0.76
CCDC142-208ENST00000486335 SMG5Q9UPR3 1016 aaKnown RBP10.31□□□□□ -0.76
CCDC142-208ENST00000486335 ZDHHC9Q9Y397 364 aa10.31□□□□□ -0.76
CCDC142-208ENST00000486335 PCDHGA2Q9Y5H1 932 aa10.31□□□□□ -0.76
CCDC142-208ENST00000486335 FRYQ5TBA9 3013 aa10.31□□□□□ -0.76
CCDC142-208ENST00000486335 NOTCH4Q99466 2003 aa10.3□□□□□ -0.76
CCDC142-208ENST00000486335 FAM170BA6NMN3 283 aa10.3□□□□□ -0.76
CCDC142-208ENST00000486335 PRR5-ARHGAP8B1AHC4 643 aa10.3□□□□□ -0.76
CCDC142-208ENST00000486335 MSH4O15457 936 aa10.3□□□□□ -0.76
CCDC142-208ENST00000486335 GAS2O43903 313 aaKnown RBP10.3□□□□□ -0.76
CCDC142-208ENST00000486335 CDKL5O76039 1030 aa10.3□□□□□ -0.76
CCDC142-208ENST00000486335 GLUD1P00367 558 aa10.3□□□□□ -0.76
CCDC142-208ENST00000486335 POMCP01189 267 aa10.3□□□□□ -0.76
CCDC142-208ENST00000486335 IFNAR1P17181 557 aa10.3□□□□□ -0.76
CCDC142-208ENST00000486335 SYT1P21579 422 aa10.3□□□□□ -0.76
CCDC142-208ENST00000486335 CDC27P30260 824 aa10.3□□□□□ -0.76
CCDC142-208ENST00000486335 ZNF76P36508 570 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms