RNA–Protein interactions for RNA: ENST00000486032.1

COPS3-208, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 725 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-208ENST00000486032 SCN10AQ9Y5Y9 1956 aa6.24□□□□□ -1.41
COPS3-208ENST00000486032 UMODL1Q5DID0 1318 aa6.24□□□□□ -1.41
COPS3-208ENST00000486032 LAMA3Q16787 3333 aa6.24□□□□□ -1.41
COPS3-208ENST00000486032 EVPLQ92817 2033 aa6.23□□□□□ -1.41
COPS3-208ENST00000486032 COL1A2P08123 1366 aa6.23□□□□□ -1.41
COPS3-208ENST00000486032 MYMKA6NI61 221 aa6.23□□□□□ -1.41
COPS3-208ENST00000486032 CCDC169A6NNP5 214 aa6.23□□□□□ -1.41
COPS3-208ENST00000486032 RSPH10B2B2RC85 870 aa6.23□□□□□ -1.41
COPS3-208ENST00000486032 ZBTB42B2RXF5 422 aa6.23□□□□□ -1.41
COPS3-208ENST00000486032 M0QZ92 97 aa6.23□□□□□ -1.41
COPS3-208ENST00000486032 MAGEB2O15479 319 aa6.23□□□□□ -1.41
COPS3-208ENST00000486032 SLC26A4O43511 780 aa6.23□□□□□ -1.41
COPS3-208ENST00000486032 KINO60870 393 aaKnown RBP6.23□□□□□ -1.41
COPS3-208ENST00000486032 HIP1RO75146 1068 aa6.23□□□□□ -1.41
COPS3-208ENST00000486032 TBCAO75347 108 aaKnown RBP6.23□□□□□ -1.41
COPS3-208ENST00000486032 MAFO75444 373 aaPredicted RBP6.23□□□□□ -1.41
COPS3-208ENST00000486032 FAM13AO94988 1023 aa6.23□□□□□ -1.41
COPS3-208ENST00000486032 RSPH10BP0C881 870 aa6.23□□□□□ -1.41
COPS3-208ENST00000486032 SRGAP2CP0DJJ0 459 aa6.23□□□□□ -1.41
COPS3-208ENST00000486032 XRCC6P12956 609 aaKnown RBP eCLIP6.23□□□□□ -1.41
COPS3-208ENST00000486032 CYP11B2P19099 503 aa6.23□□□□□ -1.41
COPS3-208ENST00000486032 IBSPP21815 317 aaPredicted RBP6.23□□□□□ -1.41
COPS3-208ENST00000486032 AMPD1P23109 780 aa6.23□□□□□ -1.41
COPS3-208ENST00000486032 RFC5P40937 340 aa6.23□□□□□ -1.41
COPS3-208ENST00000486032 DNM2P50570 870 aa6.23□□□□□ -1.41
COPS3-208ENST00000486032 CDK7P50613 346 aa6.23□□□□□ -1.41
COPS3-208ENST00000486032 EPHB4P54760 987 aa6.23□□□□□ -1.41
COPS3-208ENST00000486032 SLC12A3P55017 1021 aa6.23□□□□□ -1.41
COPS3-208ENST00000486032 CCL23P55773 120 aa6.23□□□□□ -1.41
COPS3-208ENST00000486032 ASIC1P78348 528 aa6.23□□□□□ -1.41
COPS3-208ENST00000486032 AMPD3Q01432 767 aa6.23□□□□□ -1.41
COPS3-208ENST00000486032 FAM160A1Q05DH4 1040 aa6.23□□□□□ -1.41
COPS3-208ENST00000486032 PTPN11Q06124 597 aaPredicted RBP6.23□□□□□ -1.41
COPS3-208ENST00000486032 TARBP2Q15633 366 aaKnown RBP6.23□□□□□ -1.41
COPS3-208ENST00000486032 CAMK4Q16566 473 aa6.23□□□□□ -1.41
COPS3-208ENST00000486032 NKAPLQ5M9Q1 402 aa6.23□□□□□ -1.41
COPS3-208ENST00000486032 MARCH8Q5T0T0 291 aa6.23□□□□□ -1.41
COPS3-208ENST00000486032 KRBA2Q6ZNG9 492 aa6.23□□□□□ -1.41
COPS3-208ENST00000486032 CLEC17AQ6ZS10 378 aa6.23□□□□□ -1.41
COPS3-208ENST00000486032 C1orf229Q6ZS94 237 aaPredicted RBP6.23□□□□□ -1.41
COPS3-208ENST00000486032 RSPH3Q86UC2 560 aa6.23□□□□□ -1.41
COPS3-208ENST00000486032 KSR1Q8IVT5 923 aa6.23□□□□□ -1.41
COPS3-208ENST00000486032 FAM126BQ8IXS8 530 aa6.23□□□□□ -1.41
COPS3-208ENST00000486032 FMR1NBQ8N0W7 255 aaPredicted RBP6.23□□□□□ -1.41
COPS3-208ENST00000486032 DHX38Q92620 1227 aaKnown RBP6.23□□□□□ -1.41
COPS3-208ENST00000486032 WNT8BQ93098 351 aa6.23□□□□□ -1.41
COPS3-208ENST00000486032 PAGE5Q96GU1 130 aa6.23□□□□□ -1.41
COPS3-208ENST00000486032 NLRP4Q96MN2 994 aa6.23□□□□□ -1.41
COPS3-208ENST00000486032 MAP7D2Q96T17 732 aa6.23□□□□□ -1.41
COPS3-208ENST00000486032 JPH2Q9BR39 696 aaPredicted RBP6.23□□□□□ -1.41
COPS3-208ENST00000486032 PYM1Q9BRP8 204 aaKnown RBP6.23□□□□□ -1.41
COPS3-208ENST00000486032 HTATIP2Q9BUP3 242 aa6.23□□□□□ -1.41
COPS3-208ENST00000486032 XPNPEP1Q9NQW7 623 aa6.23□□□□□ -1.41
COPS3-208ENST00000486032 TMEM39AQ9NV64 488 aa6.23□□□□□ -1.41
COPS3-208ENST00000486032 TBC1D7Q9P0N9 293 aa6.23□□□□□ -1.41
COPS3-208ENST00000486032 GDF2Q9UK05 429 aaPredicted RBP6.23□□□□□ -1.41
COPS3-208ENST00000486032 PCDHA2Q9Y5H9 948 aa6.23□□□□□ -1.41
COPS3-208ENST00000486032 SZT2Q5T011 3432 aa6.23□□□□□ -1.41
COPS3-208ENST00000486032 MROH7Q68CQ1 1323 aa6.23□□□□□ -1.41
COPS3-208ENST00000486032 CEP290O15078 2479 aa6.22□□□□□ -1.41
COPS3-208ENST00000486032 A0A087WZ62 844 aa6.22□□□□□ -1.41
COPS3-208ENST00000486032 TRIM43BA6NCK2 446 aa6.22□□□□□ -1.41
COPS3-208ENST00000486032 LRRIQ4A6NIV6 560 aa6.22□□□□□ -1.41
COPS3-208ENST00000486032 TULP1O00294 542 aaPredicted RBP6.22□□□□□ -1.41
COPS3-208ENST00000486032 SOX1O00570 391 aaPredicted RBP6.22□□□□□ -1.41
COPS3-208ENST00000486032 CLTBP09497 229 aa6.22□□□□□ -1.41
COPS3-208ENST00000486032 SLFN14P0C7P3 912 aa6.22□□□□□ -1.41
COPS3-208ENST00000486032 CAPN2P17655 700 aa6.22□□□□□ -1.41
COPS3-208ENST00000486032 FGFR4P22455 802 aa6.22□□□□□ -1.41
COPS3-208ENST00000486032 CYP2C18P33260 490 aa6.22□□□□□ -1.41
COPS3-208ENST00000486032 PEX3P56589 373 aa6.22□□□□□ -1.41
COPS3-208ENST00000486032 NLRP11P59045 1033 aaKnown RBP6.22□□□□□ -1.41
COPS3-208ENST00000486032 ADAM17P78536 824 aa6.22□□□□□ -1.41
COPS3-208ENST00000486032 FAAP100Q0VG06 881 aa6.22□□□□□ -1.41
COPS3-208ENST00000486032 PTK7Q13308 1070 aa6.22□□□□□ -1.41
COPS3-208ENST00000486032 PNOCQ13519 176 aa6.22□□□□□ -1.41
COPS3-208ENST00000486032 SNW1Q13573 536 aaKnown RBP6.22□□□□□ -1.41
COPS3-208ENST00000486032 CUL4BQ13620 913 aa6.22□□□□□ -1.41
COPS3-208ENST00000486032 SNX17Q15036 470 aa6.22□□□□□ -1.41
COPS3-208ENST00000486032 NFKBIBQ15653 356 aa6.22□□□□□ -1.41
COPS3-208ENST00000486032 TMEM132AQ24JP5 1023 aa6.22□□□□□ -1.41
COPS3-208ENST00000486032 KIZQ2M2Z5 673 aa6.22□□□□□ -1.41
COPS3-208ENST00000486032 ARSHQ5FYA8 562 aa6.22□□□□□ -1.41
COPS3-208ENST00000486032 IER5Q5VY09 327 aa6.22□□□□□ -1.41
COPS3-208ENST00000486032 ISM2Q6H9L7 571 aa6.22□□□□□ -1.41
COPS3-208ENST00000486032 C1orf186Q6ZWK4 172 aa6.22□□□□□ -1.41
COPS3-208ENST00000486032 PRICKLE2Q7Z3G6 844 aa6.22□□□□□ -1.41
COPS3-208ENST00000486032 SERINC5Q86VE9 423 aa6.22□□□□□ -1.41
COPS3-208ENST00000486032 SESTD1Q86VW0 696 aa6.22□□□□□ -1.41
COPS3-208ENST00000486032 CCDC65Q8IXS2 484 aa6.22□□□□□ -1.41
COPS3-208ENST00000486032 EXOC8Q8IYI6 725 aa6.22□□□□□ -1.41
COPS3-208ENST00000486032 MYCT1Q8N699 235 aa6.22□□□□□ -1.41
COPS3-208ENST00000486032 SLC43A3Q8NBI5 491 aa6.22□□□□□ -1.41
COPS3-208ENST00000486032 MCPH1Q8NEM0 835 aa6.22□□□□□ -1.41
COPS3-208ENST00000486032 ENGASEQ8NFI3 743 aa6.22□□□□□ -1.41
COPS3-208ENST00000486032 DEPTORQ8TB45 409 aa6.22□□□□□ -1.41
COPS3-208ENST00000486032 GPT2Q8TD30 523 aa6.22□□□□□ -1.41
COPS3-208ENST00000486032 ASAP3Q8TDY4 903 aa6.22□□□□□ -1.41
COPS3-208ENST00000486032 SPIRE2Q8WWL2 714 aa6.22□□□□□ -1.41
COPS3-208ENST00000486032 TCP11Q8WWU5 503 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms