RNA–Protein interactions for RNA: ENST00000485985.1

LMBR1-217, Transcript of limb development membrane protein 1, humanhuman

TSL 2

Gene LMBR1, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-217ENST00000485985 GLRA2P23416 452 aa23.19■■□□□ 1.3
LMBR1-217ENST00000485985 SLC11A1P49279 550 aa23.19■■□□□ 1.3
LMBR1-217ENST00000485985 RNASELQ05823 741 aaKnown RBP23.19■■□□□ 1.3
LMBR1-217ENST00000485985 MBTD1Q05BQ5 628 aa23.19■■□□□ 1.3
LMBR1-217ENST00000485985 MTMR3Q13615 1198 aa23.19■■□□□ 1.3
LMBR1-217ENST00000485985 AMHR2Q16671 573 aa23.19■■□□□ 1.3
LMBR1-217ENST00000485985 CATSPER3Q86XQ3 398 aa23.19■■□□□ 1.3
LMBR1-217ENST00000485985 AUTS2Q8WXX7 1259 aa23.19■■□□□ 1.3
LMBR1-217ENST00000485985 IGSF21Q96ID5 467 aa23.19■■□□□ 1.3
LMBR1-217ENST00000485985 CPB2Q96IY4 423 aa23.19■■□□□ 1.3
LMBR1-217ENST00000485985 ZSCAN31Q96LW9 406 aaPredicted RBP23.19■■□□□ 1.3
LMBR1-217ENST00000485985 CCDC43Q96MW1 224 aaKnown RBP23.19■■□□□ 1.3
LMBR1-217ENST00000485985 EIF2AQ9BY44 585 aaKnown RBP23.19■■□□□ 1.3
LMBR1-217ENST00000485985 POLR3FQ9H1D9 316 aaPredicted RBP23.19■■□□□ 1.3
LMBR1-217ENST00000485985 SH2B1Q9NRF2 756 aaPredicted RBP23.19■■□□□ 1.3
LMBR1-217ENST00000485985 IRAK3Q9Y616 596 aa23.19■■□□□ 1.3
LMBR1-217ENST00000485985 C2orf16Q68DN1 1984 aa23.19■■□□□ 1.3
LMBR1-217ENST00000485985 ZFHX2Q9C0A1 2572 aaPredicted RBP23.19■■□□□ 1.3
LMBR1-217ENST00000485985 CNTNAP2Q9UHC6 1331 aa23.18■■□□□ 1.3
LMBR1-217ENST00000485985 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP23.18■■□□□ 1.3
LMBR1-217ENST00000485985 INO80B-WBP1J3KQ70 363 aa23.18■■□□□ 1.3
LMBR1-217ENST00000485985 DDHD2O94830 711 aa23.18■■□□□ 1.3
LMBR1-217ENST00000485985 BRD1O95696 1058 aa23.18■■□□□ 1.3
LMBR1-217ENST00000485985 WEE2P0C1S8 567 aa23.18■■□□□ 1.3
LMBR1-217ENST00000485985 OR52Z1P0C646 297 aa23.18■■□□□ 1.3
LMBR1-217ENST00000485985 NCLP19338 710 aaKnown RBP23.18■■□□□ 1.3
LMBR1-217ENST00000485985 NUBP1P53384 320 aa23.18■■□□□ 1.3
LMBR1-217ENST00000485985 HMGN5P82970 282 aaKnown RBP23.18■■□□□ 1.3
LMBR1-217ENST00000485985 TFDP1Q14186 410 aa23.18■■□□□ 1.3
LMBR1-217ENST00000485985 ZNF174Q15697 407 aa23.18■■□□□ 1.3
LMBR1-217ENST00000485985 RARS2Q5T160 578 aaKnown RBP23.18■■□□□ 1.3
LMBR1-217ENST00000485985 POTEGQ6S5H5 508 aa23.18■■□□□ 1.3
LMBR1-217ENST00000485985 DDX53Q86TM3 631 aaKnown RBP23.18■■□□□ 1.3
LMBR1-217ENST00000485985 C12orf76Q8N812 135 aaPredicted RBP23.18■■□□□ 1.3
LMBR1-217ENST00000485985 URGCPQ8TCY9 931 aa23.18■■□□□ 1.3
LMBR1-217ENST00000485985 ATOH1Q92858 354 aaPredicted RBP23.18■■□□□ 1.3
LMBR1-217ENST00000485985 GPRC5CQ9NQ84 441 aa23.18■■□□□ 1.3
LMBR1-217ENST00000485985 IPPQ9Y573 584 aa23.18■■□□□ 1.3
LMBR1-217ENST00000485985 CARNS1A5YM72 827 aa23.17■■□□□ 1.3
LMBR1-217ENST00000485985 CTSAP10619 480 aa23.17■■□□□ 1.3
LMBR1-217ENST00000485985 POU5F1BQ06416 359 aa23.17■■□□□ 1.3
LMBR1-217ENST00000485985 GIT2Q14161 759 aa23.17■■□□□ 1.3
LMBR1-217ENST00000485985 NBR1Q14596 966 aa23.17■■□□□ 1.3
LMBR1-217ENST00000485985 TTC38Q5R3I4 469 aa23.17■■□□□ 1.3
LMBR1-217ENST00000485985 KANK3Q6NY19 840 aa23.17■■□□□ 1.3
LMBR1-217ENST00000485985 NOTUMQ6P988 496 aa23.17■■□□□ 1.3
LMBR1-217ENST00000485985 NOSTRINQ8IVI9 506 aa23.17■■□□□ 1.3
LMBR1-217ENST00000485985 TMEM87AQ8NBN3 555 aa23.17■■□□□ 1.3
LMBR1-217ENST00000485985 TUFT1Q9NNX1 390 aa23.17■■□□□ 1.3
LMBR1-217ENST00000485985 DZANK1Q9NVP4 752 aa23.17■■□□□ 1.3
LMBR1-217ENST00000485985 HES2Q9Y543 173 aa23.17■■□□□ 1.3
LMBR1-217ENST00000485985 B4GALT5O43286 388 aa23.16■■□□□ 1.3
LMBR1-217ENST00000485985 EPCAMP16422 314 aa23.16■■□□□ 1.3
LMBR1-217ENST00000485985 AXLP30530 894 aa23.16■■□□□ 1.3
LMBR1-217ENST00000485985 RBM25P49756 843 aaKnown RBP23.16■■□□□ 1.3
LMBR1-217ENST00000485985 ORC2Q13416 577 aaPredicted RBP23.16■■□□□ 1.3
LMBR1-217ENST00000485985 PCBP1Q15365 356 aaKnown RBP eCLIP23.16■■□□□ 1.32e-7■■□□□ 14.5
LMBR1-217ENST00000485985 ATAT1Q5SQI0 421 aa23.16■■□□□ 1.3
LMBR1-217ENST00000485985 SLC22A17Q8WUG5 538 aa23.16■■□□□ 1.3
LMBR1-217ENST00000485985 POLR3CQ9BUI4 534 aaPredicted RBP23.16■■□□□ 1.3
LMBR1-217ENST00000485985 NFKBIZQ9BYH8 718 aa23.16■■□□□ 1.3
LMBR1-217ENST00000485985 TRIP11Q15643 1979 aa23.16■■□□□ 1.3
LMBR1-217ENST00000485985 USP34Q70CQ2 3546 aa23.15■■□□□ 1.3
LMBR1-217ENST00000485985 H0Y858 1186 aa23.15■■□□□ 1.3
LMBR1-217ENST00000485985 GFRA3O60609 400 aa23.15■■□□□ 1.3
LMBR1-217ENST00000485985 POMCP01189 267 aa23.15■■□□□ 1.3
LMBR1-217ENST00000485985 XRCC6P12956 609 aaKnown RBP eCLIP23.15■■□□□ 1.3
LMBR1-217ENST00000485985 ARF4P18085 180 aaPredicted RBP23.15■■□□□ 1.3
LMBR1-217ENST00000485985 KIAA1841Q6NSI8 718 aa23.15■■□□□ 1.3
LMBR1-217ENST00000485985 MAEAQ7L5Y9 396 aa23.15■■□□□ 1.3
LMBR1-217ENST00000485985 ZDHHC14Q8IZN3 488 aa23.15■■□□□ 1.3
LMBR1-217ENST00000485985 TDRD5Q8NAT2 981 aaKnown RBP23.15■■□□□ 1.3
LMBR1-217ENST00000485985 CCDC51Q96ER9 411 aa23.15■■□□□ 1.3
LMBR1-217ENST00000485985 CSRNP2Q9H175 543 aa23.15■■□□□ 1.3
LMBR1-217ENST00000485985 RNF39Q9H2S5 420 aa23.15■■□□□ 1.3
LMBR1-217ENST00000485985 SMOC2Q9H3U7 446 aa23.15■■□□□ 1.3
LMBR1-217ENST00000485985 DBR1Q9UK59 544 aaKnown RBP23.15■■□□□ 1.3
LMBR1-217ENST00000485985 INPPL1O15357 1258 aa23.14■■□□□ 1.29
LMBR1-217ENST00000485985 GALR2O43603 387 aaPredicted RBP23.14■■□□□ 1.29
LMBR1-217ENST00000485985 ASGR2P07307 311 aa23.14■■□□□ 1.29
LMBR1-217ENST00000485985 ITGA4P13612 1032 aa23.14■■□□□ 1.29
LMBR1-217ENST00000485985 MLH1P40692 756 aa23.14■■□□□ 1.29
LMBR1-217ENST00000485985 C4orf32Q8N8J7 132 aa23.14■■□□□ 1.29
LMBR1-217ENST00000485985 FAM184AQ8NB25 1140 aa23.14■■□□□ 1.29
LMBR1-217ENST00000485985 ZFP42Q96MM3 310 aa23.14■■□□□ 1.29
LMBR1-217ENST00000485985 NXF3Q9H4D5 531 aaKnown RBP23.14■■□□□ 1.29
LMBR1-217ENST00000485985 LIMD1Q9UGP4 676 aa23.14■■□□□ 1.29
LMBR1-217ENST00000485985 USTQ9Y2C2 406 aa23.14■■□□□ 1.29
LMBR1-217ENST00000485985 ARL5CA6NH57 179 aa23.13■■□□□ 1.29
LMBR1-217ENST00000485985 RPA1P27694 616 aa23.13■■□□□ 1.29
LMBR1-217ENST00000485985 GNL2Q13823 731 aaKnown RBP23.13■■□□□ 1.29
LMBR1-217ENST00000485985 CDR2LQ86X02 465 aaPredicted RBP23.13■■□□□ 1.29
LMBR1-217ENST00000485985 PLCD3Q8N3E9 789 aa23.13■■□□□ 1.29
LMBR1-217ENST00000485985 CNNM3Q8NE01 707 aa23.13■■□□□ 1.29
LMBR1-217ENST00000485985 BSNDQ8WZ55 320 aa23.13■■□□□ 1.29
LMBR1-217ENST00000485985 MYH11P35749 1972 aa23.12■■□□□ 1.29
LMBR1-217ENST00000485985 LRRIQ4A6NIV6 560 aa23.12■■□□□ 1.29
LMBR1-217ENST00000485985 U2AF2P26368 475 aaKnown RBP eCLIP23.12■■□□□ 1.298e-6■■■□□ 17.1
LMBR1-217ENST00000485985 TRAPPC10P48553 1259 aa23.12■■□□□ 1.29
LMBR1-217ENST00000485985 TOB1P50616 345 aaPredicted RBP23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms