RNA–Protein interactions for RNA: ENST00000485365.1

SFPQ-208, Transcript of splicing factor proline and glutamine rich, human

TSL 2

Gene SFPQ, Length 693 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SFPQ-208	ENST00000485365	EIF2S2	P20042	333 aa	Known RBP	6.08	□□□□□ -1.44
SFPQ-208	ENST00000485365	TMPO	P42166	694 aa	Known RBP	6.08	□□□□□ -1.44
SFPQ-208	ENST00000485365	PPP2R2A	P63151	447 aa		6.08	□□□□□ -1.44
SFPQ-208	ENST00000485365	DBP	Q10586	325 aa	Predicted RBP	6.08	□□□□□ -1.44
SFPQ-208	ENST00000485365	CCDC184	Q52MB2	194 aa		6.08	□□□□□ -1.44
SFPQ-208	ENST00000485365	LBX2	Q6XYB7	198 aa		6.08	□□□□□ -1.44
SFPQ-208	ENST00000485365	LARP4	Q71RC2	724 aa	Known RBP eCLIP	6.08	□□□□□ -1.44
SFPQ-208	ENST00000485365	SCUBE1	Q8IWY4	988 aa		6.08	□□□□□ -1.44
SFPQ-208	ENST00000485365	PLEKHF1	Q96S99	279 aa		6.08	□□□□□ -1.44
SFPQ-208	ENST00000485365	IER2	Q9BTL4	223 aa		6.08	□□□□□ -1.44
SFPQ-208	ENST00000485365	TEX13A	Q9BXU3	409 aa	Predicted RBP	6.08	□□□□□ -1.44
SFPQ-208	ENST00000485365	USP16	Q9Y5T5	823 aa		6.08	□□□□□ -1.44
SFPQ-208	ENST00000485365	COL3A1	P02461	1466 aa	Predicted RBP	6.08	□□□□□ -1.44
SFPQ-208	ENST00000485365	NUP188	Q5SRE5	1749 aa		6.08	□□□□□ -1.44
SFPQ-208	ENST00000485365	DDAH1	O94760	285 aa		6.07	□□□□□ -1.44
SFPQ-208	ENST00000485365	SNRPA1	P09661	255 aa	Known RBP	6.07	□□□□□ -1.44
SFPQ-208	ENST00000485365	MYL6B	P14649	208 aa		6.07	□□□□□ -1.44
SFPQ-208	ENST00000485365	LMOD3	Q0VAK6	560 aa		6.07	□□□□□ -1.44
SFPQ-208	ENST00000485365	KIZ	Q2M2Z5	673 aa		6.07	□□□□□ -1.44
SFPQ-208	ENST00000485365	WDR72	Q3MJ13	1102 aa		6.07	□□□□□ -1.44
SFPQ-208	ENST00000485365	ULK2	Q8IYT8	1036 aa		6.07	□□□□□ -1.44
SFPQ-208	ENST00000485365	PNISR	Q8TF01	805 aa	Known RBP	6.07	□□□□□ -1.44
SFPQ-208	ENST00000485365	CD244	Q9BZW8	370 aa		6.07	□□□□□ -1.44
SFPQ-208	ENST00000485365	SLC2A4RG	Q9NR83	387 aa		6.07	□□□□□ -1.44
SFPQ-208	ENST00000485365	HECA	Q9UBI9	543 aa	Predicted RBP	6.07	□□□□□ -1.44
SFPQ-208	ENST00000485365	ZBTB1	Q9Y2K1	713 aa		6.07	□□□□□ -1.44
SFPQ-208	ENST00000485365	REXO2	Q9Y3B8	237 aa	Known RBP	6.07	□□□□□ -1.44
SFPQ-208	ENST00000485365	SHANK3	Q9BYB0	1731 aa		6.06	□□□□□ -1.44
SFPQ-208	ENST00000485365	HMGCR	P04035	888 aa		6.06	□□□□□ -1.44
SFPQ-208	ENST00000485365	GYS1	P13807	737 aa		6.06	□□□□□ -1.44
SFPQ-208	ENST00000485365	PDE6A	P16499	860 aa		6.06	□□□□□ -1.44
SFPQ-208	ENST00000485365	SLC10A6	Q3KNW5	377 aa		6.06	□□□□□ -1.44
SFPQ-208	ENST00000485365	KCNT2	Q6UVM3	1135 aa		6.06	□□□□□ -1.44
SFPQ-208	ENST00000485365	USP30	Q70CQ3	517 aa		6.06	□□□□□ -1.44
SFPQ-208	ENST00000485365	TMPRSS6	Q8IU80	811 aa		6.06	□□□□□ -1.44
SFPQ-208	ENST00000485365	GPR135	Q8IZ08	494 aa		6.06	□□□□□ -1.44
SFPQ-208	ENST00000485365	SH3RF2	Q8TEC5	729 aa		6.06	□□□□□ -1.44
SFPQ-208	ENST00000485365	TTPAL	Q9BTX7	342 aa		6.06	□□□□□ -1.44
SFPQ-208	ENST00000485365	GIT1	Q9Y2X7	761 aa		6.06	□□□□□ -1.44
SFPQ-208	ENST00000485365	RREB1	Q92766	1687 aa		6.06	□□□□□ -1.44
SFPQ-208	ENST00000485365	PLEKHG2	Q9H7P9	1386 aa		6.06	□□□□□ -1.44
SFPQ-208	ENST00000485365	HEG1	Q9ULI3	1381 aa		6.06	□□□□□ -1.44
SFPQ-208	ENST00000485365	PKD1L3	Q7Z443	1732 aa		6.05	□□□□□ -1.44
SFPQ-208	ENST00000485365		A0A0G2JLW4	131 aa		6.05	□□□□□ -1.44
SFPQ-208	ENST00000485365	LOC107983988	A0A1B0GUW6	1196 aa	Predicted RBP	6.05	□□□□□ -1.44
SFPQ-208	ENST00000485365	KRTAP23-1	A1A580	65 aa		6.05	□□□□□ -1.44
SFPQ-208	ENST00000485365		E9PSI1	815 aa		6.05	□□□□□ -1.44
SFPQ-208	ENST00000485365	ELL2	O00472	640 aa	Predicted RBP	6.05	□□□□□ -1.44
SFPQ-208	ENST00000485365	YY1	P25490	414 aa		6.05	□□□□□ -1.44
SFPQ-208	ENST00000485365	LMO1	P25800	156 aa		6.05	□□□□□ -1.44
SFPQ-208	ENST00000485365	KCNQ1	P51787	676 aa		6.05	□□□□□ -1.44
SFPQ-208	ENST00000485365	IL13RA1	P78552	427 aa		6.05	□□□□□ -1.44
SFPQ-208	ENST00000485365	AIMP1	Q12904	312 aa	Known RBP	6.05	□□□□□ -1.44
SFPQ-208	ENST00000485365	GRM7	Q14831	915 aa		6.05	□□□□□ -1.44
SFPQ-208	ENST00000485365	SGMS1	Q86VZ5	419 aa		6.05	□□□□□ -1.44
SFPQ-208	ENST00000485365	NELFA	Q9H3P2	528 aa		6.05	□□□□□ -1.44
SFPQ-208	ENST00000485365	PARPBP	Q9NWS1	579 aa		6.05	□□□□□ -1.44
SFPQ-208	ENST00000485365	MRVI1	Q9Y6F6	885 aa		6.05	□□□□□ -1.44
SFPQ-208	ENST00000485365	TOGARAM1	Q9Y4F4	1720 aa		6.05	□□□□□ -1.44
SFPQ-208	ENST00000485365		A0A1W2PQU0	124 aa		6.04	□□□□□ -1.44
SFPQ-208	ENST00000485365	FOXN1	O15353	648 aa		6.04	□□□□□ -1.44
SFPQ-208	ENST00000485365	TCF3	P15923	654 aa		6.04	□□□□□ -1.44
SFPQ-208	ENST00000485365	ADCY8	P40145	1251 aa		6.04	□□□□□ -1.44
SFPQ-208	ENST00000485365	IL12RB1	P42701	662 aa		6.04	□□□□□ -1.44
SFPQ-208	ENST00000485365	EIF4A1	P60842	406 aa	Known RBP	6.04	□□□□□ -1.44
SFPQ-208	ENST00000485365	HHEX	Q03014	270 aa		6.04	□□□□□ -1.44
SFPQ-208	ENST00000485365	EIF4H	Q15056	248 aa	Known RBP	6.04	□□□□□ -1.44
SFPQ-208	ENST00000485365	TNNI3K	Q59H18	835 aa		6.04	□□□□□ -1.44
SFPQ-208	ENST00000485365	SPTY2D1	Q68D10	685 aa	Predicted RBP	6.04	□□□□□ -1.44
SFPQ-208	ENST00000485365	ADGRE4P	Q86SQ3	457 aa		6.04	□□□□□ -1.44
SFPQ-208	ENST00000485365	DCAF4	Q8WV16	495 aa		6.04	□□□□□ -1.44
SFPQ-208	ENST00000485365	EPN3	Q9H201	632 aa		6.04	□□□□□ -1.44
SFPQ-208	ENST00000485365	CCSER2	Q9H7U1	834 aa		6.04	□□□□□ -1.44
SFPQ-208	ENST00000485365	NARF	Q9UHQ1	456 aa		6.04	□□□□□ -1.44
SFPQ-208	ENST00000485365	CEMIP	Q8WUJ3	1361 aa		6.04	□□□□□ -1.44
SFPQ-208	ENST00000485365	ITGB4	P16144	1822 aa		6.04	□□□□□ -1.44
SFPQ-208	ENST00000485365	SOS1	Q07889	1333 aa	Predicted RBP	6.03	□□□□□ -1.44
SFPQ-208	ENST00000485365	USP42	Q9H9J4	1324 aa	Known RBP	6.03	□□□□□ -1.44
SFPQ-208	ENST00000485365	C4B	P0C0L5	1744 aa		6.03	□□□□□ -1.44
SFPQ-208	ENST00000485365	TCRBV5S4A2T	A0A5A2	114 aa		6.03	□□□□□ -1.44
SFPQ-208	ENST00000485365	CAPN14	A8MX76	684 aa		6.03	□□□□□ -1.44
SFPQ-208	ENST00000485365	PEX11B	O96011	259 aa		6.03	□□□□□ -1.44
SFPQ-208	ENST00000485365	ANXA1	P04083	346 aa		6.03	□□□□□ -1.44
SFPQ-208	ENST00000485365	SOD2	P04179	222 aa		6.03	□□□□□ -1.44
SFPQ-208	ENST00000485365	SERPINB2	P05120	415 aa		6.03	□□□□□ -1.44
SFPQ-208	ENST00000485365	ERCC5	P28715	1186 aa	Predicted RBP	6.03	□□□□□ -1.44
SFPQ-208	ENST00000485365	GJA4	P35212	333 aa		6.03	□□□□□ -1.44
SFPQ-208	ENST00000485365	IL6ST	P40189	918 aa	Predicted RBP	6.03	□□□□□ -1.44
SFPQ-208	ENST00000485365	EIF5	P55010	431 aa	Known RBP	6.03	□□□□□ -1.44
SFPQ-208	ENST00000485365	PCOLCE	Q15113	449 aa		6.03	□□□□□ -1.44
SFPQ-208	ENST00000485365	KRT24	Q2M2I5	525 aa		6.03	□□□□□ -1.44
SFPQ-208	ENST00000485365	TBC1D9B	Q66K14	1250 aa		6.03	□□□□□ -1.44
SFPQ-208	ENST00000485365	KIF6	Q6ZMV9	814 aa		6.03	□□□□□ -1.44
SFPQ-208	ENST00000485365	D2HGDH	Q8N465	521 aa		6.03	□□□□□ -1.44
SFPQ-208	ENST00000485365	ZNF622	Q969S3	477 aa	Known RBP eCLIP	6.03	□□□□□ -1.44	3e-23	■■□□□ 13.2
SFPQ-208	ENST00000485365	ZFYVE21	Q9BQ24	234 aa		6.03	□□□□□ -1.44
SFPQ-208	ENST00000485365	TGIF2	Q9GZN2	237 aa		6.03	□□□□□ -1.44
SFPQ-208	ENST00000485365	ACBD3	Q9H3P7	528 aa		6.03	□□□□□ -1.44
SFPQ-208	ENST00000485365	ARHGAP28	Q9P2N2	729 aa		6.03	□□□□□ -1.44
SFPQ-208	ENST00000485365	FBXO10	Q9UK96	956 aa		6.03	□□□□□ -1.44

Retrieved 100 of 20,778 RNA–protein pairs in 44 ms