RNA–Protein interactions for RNA: ENST00000485063.1

MACF1-220, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 3

Gene MACF1, Length 438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-220ENST00000485063 PYM1Q9BRP8 204 aaKnown RBP8.62□□□□□ -1.03
MACF1-220ENST00000485063 C17orf80Q9BSJ5 609 aa8.62□□□□□ -1.03
MACF1-220ENST00000485063 C11orf84Q9BUA3 381 aaPredicted RBP8.62□□□□□ -1.03
MACF1-220ENST00000485063 RUSC1Q9BVN2 902 aa8.62□□□□□ -1.03
MACF1-220ENST00000485063 PLVAPQ9BX97 442 aa8.62□□□□□ -1.03
MACF1-220ENST00000485063 LRRC27Q9C0I9 530 aa8.62□□□□□ -1.03
MACF1-220ENST00000485063 TMEM117Q9H0C3 514 aa8.62□□□□□ -1.03
MACF1-220ENST00000485063 ZHX3Q9H4I2 956 aa8.62□□□□□ -1.03
MACF1-220ENST00000485063 UBN1Q9NPG3 1134 aa8.62□□□□□ -1.03
MACF1-220ENST00000485063 FAM13BQ9NYF5 915 aa8.62□□□□□ -1.03
MACF1-220ENST00000485063 PCDHB2Q9Y5E7 798 aa8.62□□□□□ -1.03
MACF1-220ENST00000485063 PCDHB12Q9Y5F1 795 aa8.62□□□□□ -1.03
MACF1-220ENST00000485063 COL4A4P53420 1690 aaPredicted RBP8.62□□□□□ -1.03
MACF1-220ENST00000485063 CNTNAP2Q9UHC6 1331 aa8.61□□□□□ -1.03
MACF1-220ENST00000485063 TDRD15B5MCY1 1934 aaKnown RBP8.61□□□□□ -1.03
MACF1-220ENST00000485063 TCHHQ07283 1943 aa8.61□□□□□ -1.03
MACF1-220ENST00000485063 SFI1A8K8P3 1242 aa8.61□□□□□ -1.03
MACF1-220ENST00000485063 RBAK-RBAKDNI3L0D1 243 aa8.61□□□□□ -1.03
MACF1-220ENST00000485063 ACKR2O00590 384 aa8.61□□□□□ -1.03
MACF1-220ENST00000485063 TBCAO75347 108 aaKnown RBP8.61□□□□□ -1.03
MACF1-220ENST00000485063 PLS3P13797 630 aa8.61□□□□□ -1.03
MACF1-220ENST00000485063 ARF4P18085 180 aaPredicted RBP8.61□□□□□ -1.03
MACF1-220ENST00000485063 LAG3P18627 525 aa8.61□□□□□ -1.03
MACF1-220ENST00000485063 SCP2P22307 547 aa8.61□□□□□ -1.03
MACF1-220ENST00000485063 HOXA11P31270 313 aaPredicted RBP8.61□□□□□ -1.03
MACF1-220ENST00000485063 BMPR1AP36894 532 aa8.61□□□□□ -1.03
MACF1-220ENST00000485063 NPTX2P47972 431 aa8.61□□□□□ -1.03
MACF1-220ENST00000485063 AMPD3Q01432 767 aa8.61□□□□□ -1.03
MACF1-220ENST00000485063 RNASELQ05823 741 aaKnown RBP8.61□□□□□ -1.03
MACF1-220ENST00000485063 GPM6BQ13491 265 aa8.61□□□□□ -1.03
MACF1-220ENST00000485063 MCM6Q14566 821 aa8.61□□□□□ -1.03
MACF1-220ENST00000485063 NAALADL2Q58DX5 795 aa8.61□□□□□ -1.03
MACF1-220ENST00000485063 MYCT1Q8N699 235 aa8.61□□□□□ -1.03
MACF1-220ENST00000485063 PDILTQ8N807 584 aa8.61□□□□□ -1.03
MACF1-220ENST00000485063 SLC17A8Q8NDX2 589 aa8.61□□□□□ -1.03
MACF1-220ENST00000485063 HELQQ8TDG4 1101 aa8.61□□□□□ -1.03
MACF1-220ENST00000485063 BSNDQ8WZ55 320 aa8.61□□□□□ -1.03
MACF1-220ENST00000485063 CLP1Q92989 425 aaKnown RBP8.61□□□□□ -1.03
MACF1-220ENST00000485063 P2RX5Q93086 422 aa8.61□□□□□ -1.03
MACF1-220ENST00000485063 SPATA32Q96LK8 384 aa8.61□□□□□ -1.03
MACF1-220ENST00000485063 FAM193BQ96PV7 902 aaPredicted RBP8.61□□□□□ -1.03
MACF1-220ENST00000485063 SCAND2PQ9GZW5 306 aaPredicted RBP8.61□□□□□ -1.03
MACF1-220ENST00000485063 FZD8Q9H461 694 aa8.61□□□□□ -1.03
MACF1-220ENST00000485063 CUEDC2Q9H467 287 aa8.61□□□□□ -1.03
MACF1-220ENST00000485063 TMEM134Q9H6X4 195 aa8.61□□□□□ -1.03
MACF1-220ENST00000485063 RSAD1Q9HA92 442 aa8.61□□□□□ -1.03
MACF1-220ENST00000485063 RC3H2Q9HBD1 1191 aaKnown RBP8.61□□□□□ -1.03
MACF1-220ENST00000485063 POLD4Q9HCU8 107 aa8.61□□□□□ -1.03
MACF1-220ENST00000485063 BLOC1S4Q9NUP1 217 aa8.61□□□□□ -1.03
MACF1-220ENST00000485063 LMCD1Q9NZU5 365 aa8.61□□□□□ -1.03
MACF1-220ENST00000485063 KANSL3Q9P2N6 904 aa8.61□□□□□ -1.03
MACF1-220ENST00000485063 A0A1B0GUA9 196 aa8.6□□□□□ -1.03
MACF1-220ENST00000485063 C5orf67F2Z3F1 127 aa8.6□□□□□ -1.03
MACF1-220ENST00000485063 H3BNC9 293 aa8.6□□□□□ -1.03
MACF1-220ENST00000485063 RFXAPO00287 272 aa8.6□□□□□ -1.03
MACF1-220ENST00000485063 SLC16A4O15374 487 aa8.6□□□□□ -1.03
MACF1-220ENST00000485063 B4GALT5O43286 388 aa8.6□□□□□ -1.03
MACF1-220ENST00000485063 TRAK2O60296 914 aa8.6□□□□□ -1.03
MACF1-220ENST00000485063 ARHGEF15O94989 841 aa8.6□□□□□ -1.03
MACF1-220ENST00000485063 NPTXRO95502 500 aa8.6□□□□□ -1.03
MACF1-220ENST00000485063 GATMP50440 423 aa8.6□□□□□ -1.03
MACF1-220ENST00000485063 AMHR2Q16671 573 aa8.6□□□□□ -1.03
MACF1-220ENST00000485063 DCAF4L1Q3SXM0 396 aa8.6□□□□□ -1.03
MACF1-220ENST00000485063 LONRF3Q496Y0 759 aa8.6□□□□□ -1.03
MACF1-220ENST00000485063 NOMO2Q5JPE7 1267 aa8.6□□□□□ -1.03
MACF1-220ENST00000485063 USP49Q70CQ1 688 aa8.6□□□□□ -1.03
MACF1-220ENST00000485063 DYMQ7RTS9 669 aa8.6□□□□□ -1.03
MACF1-220ENST00000485063 MRPL10Q7Z7H8 261 aaKnown RBP8.6□□□□□ -1.03
MACF1-220ENST00000485063 ZNF598Q86UK7 904 aaKnown RBP8.6□□□□□ -1.03
MACF1-220ENST00000485063 MICALL1Q8N3F8 863 aa8.6□□□□□ -1.03
MACF1-220ENST00000485063 IQUBQ8NA54 791 aa8.6□□□□□ -1.03
MACF1-220ENST00000485063 MAFAQ8NHW3 353 aaPredicted RBP8.6□□□□□ -1.03
MACF1-220ENST00000485063 GDPD5Q8WTR4 605 aa8.6□□□□□ -1.03
MACF1-220ENST00000485063 SPIRE2Q8WWL2 714 aa8.6□□□□□ -1.03
MACF1-220ENST00000485063 PPM1EQ8WY54 764 aa8.6□□□□□ -1.03
MACF1-220ENST00000485063 LPPQ93052 612 aa8.6□□□□□ -1.03
MACF1-220ENST00000485063 CASD1Q96PB1 797 aa8.6□□□□□ -1.03
MACF1-220ENST00000485063 RPS6KC1Q96S38 1066 aa8.6□□□□□ -1.03
MACF1-220ENST00000485063 REEP2Q9BRK0 252 aa8.6□□□□□ -1.03
MACF1-220ENST00000485063 NTPCRQ9BSD7 190 aaKnown RBP8.6□□□□□ -1.03
MACF1-220ENST00000485063 TCHPQ9BT92 498 aa8.6□□□□□ -1.03
MACF1-220ENST00000485063 MRPL4Q9BYD3 311 aaKnown RBP8.6□□□□□ -1.03
MACF1-220ENST00000485063 PANK2Q9BZ23 570 aa8.6□□□□□ -1.03
MACF1-220ENST00000485063 LMAN2LQ9H0V9 348 aa8.6□□□□□ -1.03
MACF1-220ENST00000485063 PARVGQ9HBI0 331 aa8.6□□□□□ -1.03
MACF1-220ENST00000485063 TYW1Q9NV66 732 aaKnown RBP8.6□□□□□ -1.03
MACF1-220ENST00000485063 PLA2G2EQ9NZK7 142 aa8.6□□□□□ -1.03
MACF1-220ENST00000485063 RCOR1Q9UKL0 485 aa8.6□□□□□ -1.03
MACF1-220ENST00000485063 PCDHA7Q9UN72 937 aa8.6□□□□□ -1.03
MACF1-220ENST00000485063 INPP5FQ9Y2H2 1132 aa8.6□□□□□ -1.03
MACF1-220ENST00000485063 IPPQ9Y573 584 aa8.6□□□□□ -1.03
MACF1-220ENST00000485063 MRPL42Q9Y6G3 142 aaKnown RBP8.6□□□□□ -1.03
MACF1-220ENST00000485063 NPHP3-ACAD11A0A0J9YXS1 232 aa8.59□□□□□ -1.03
MACF1-220ENST00000485063 K7ENM7 598 aa8.59□□□□□ -1.03
MACF1-220ENST00000485063 ARHGAP33O14559 1287 aa8.59□□□□□ -1.03
MACF1-220ENST00000485063 NR1I2O75469 434 aa8.59□□□□□ -1.03
MACF1-220ENST00000485063 ATF7P17544 494 aaPredicted RBP8.59□□□□□ -1.03
MACF1-220ENST00000485063 POU3F3P20264 500 aaPredicted RBP8.59□□□□□ -1.03
MACF1-220ENST00000485063 PPM1AP35813 382 aa8.59□□□□□ -1.03
MACF1-220ENST00000485063 MATR3P43243 847 aaKnown RBP eCLIP8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms