RNA–Protein interactions for RNA: ENST00000485055.5

CCDC39-205, Transcript of coiled-coil domain containing 39, humanhuman

TSL 1 (best)

Gene CCDC39, Length 2,874 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-205ENST00000485055 GARTP22102 1010 aa5.87□□□□□ -1.47
CCDC39-205ENST00000485055 CHMLP26374 656 aa5.87□□□□□ -1.47
CCDC39-205ENST00000485055 AK2P54819 239 aa5.87□□□□□ -1.47
CCDC39-205ENST00000485055 PLIN5Q00G26 463 aa5.87□□□□□ -1.47
CCDC39-205ENST00000485055 GRM4Q14833 912 aa5.87□□□□□ -1.47
CCDC39-205ENST00000485055 TMEM67Q5HYA8 995 aa5.87□□□□□ -1.47
CCDC39-205ENST00000485055 RETSATQ6NUM9 610 aa5.87□□□□□ -1.47
CCDC39-205ENST00000485055 CCDC62Q6P9F0 684 aa5.87□□□□□ -1.47
CCDC39-205ENST00000485055 NCAPG2Q86XI2 1143 aa5.87□□□□□ -1.47
CCDC39-205ENST00000485055 TBC1D10CQ8IV04 446 aa5.87□□□□□ -1.47
CCDC39-205ENST00000485055 GALNT12Q8IXK2 581 aa5.87□□□□□ -1.47
CCDC39-205ENST00000485055 AFAP1L1Q8TED9 768 aa5.87□□□□□ -1.47
CCDC39-205ENST00000485055 UROC1Q96N76 676 aa5.87□□□□□ -1.47
CCDC39-205ENST00000485055 ZSCAN10Q96SZ4 725 aaPredicted RBP5.87□□□□□ -1.47
CCDC39-205ENST00000485055 TSPY26PQ9H489 355 aa5.87□□□□□ -1.47
CCDC39-205ENST00000485055 STXBP5LQ9Y2K9 1186 aa5.87□□□□□ -1.47
CCDC39-205ENST00000485055 A0A1W2PQ45 241 aaPredicted RBP5.87□□□□□ -1.47
CCDC39-205ENST00000485055 A0A1W2PQY0 241 aa5.87□□□□□ -1.47
CCDC39-205ENST00000485055 ARVCFO00192 962 aa5.87□□□□□ -1.47
CCDC39-205ENST00000485055 ZEB2O60315 1214 aa5.87□□□□□ -1.47
CCDC39-205ENST00000485055 MT-CO1P00395 513 aa5.87□□□□□ -1.47
CCDC39-205ENST00000485055 TIMP1P01033 207 aa5.87□□□□□ -1.47
CCDC39-205ENST00000485055 KRT10P13645 584 aa5.87□□□□□ -1.47
CCDC39-205ENST00000485055 ATP6V1E1P36543 226 aa5.87□□□□□ -1.47
CCDC39-205ENST00000485055 ANP32AP39687 249 aaKnown RBP5.87□□□□□ -1.47
CCDC39-205ENST00000485055 SLC1A4P43007 532 aa5.87□□□□□ -1.47
CCDC39-205ENST00000485055 ACLYP53396 1101 aa5.87□□□□□ -1.47
CCDC39-205ENST00000485055 ODF1Q14990 250 aa5.87□□□□□ -1.47
CCDC39-205ENST00000485055 KRT72Q14CN4 511 aa5.87□□□□□ -1.47
CCDC39-205ENST00000485055 BMP2KLQ5H9B9 411 aa5.87□□□□□ -1.47
CCDC39-205ENST00000485055 NFRKBQ6P4R8 1299 aa5.87□□□□□ -1.47
CCDC39-205ENST00000485055 ARMCX2Q7L311 632 aa5.87□□□□□ -1.47
CCDC39-205ENST00000485055 DNAJB7Q7Z6W7 309 aaPredicted RBP5.87□□□□□ -1.47
CCDC39-205ENST00000485055 GALNT13Q8IUC8 556 aa5.87□□□□□ -1.47
CCDC39-205ENST00000485055 NRSN1Q8IZ57 195 aa5.87□□□□□ -1.47
CCDC39-205ENST00000485055 ZSWIM2Q8NEG5 633 aa5.87□□□□□ -1.47
CCDC39-205ENST00000485055 SGCZQ96LD1 299 aa5.87□□□□□ -1.47
CCDC39-205ENST00000485055 FAM227BQ96M60 508 aa5.87□□□□□ -1.47
CCDC39-205ENST00000485055 TRERF1Q96PN7 1200 aa5.87□□□□□ -1.47
CCDC39-205ENST00000485055 SPZ1Q9BXG8 430 aa5.87□□□□□ -1.47
CCDC39-205ENST00000485055 SLC26A6Q9BXS9 759 aa5.87□□□□□ -1.47
CCDC39-205ENST00000485055 PIH1D1Q9NWS0 290 aaKnown RBP5.87□□□□□ -1.47
CCDC39-205ENST00000485055 KCTD5Q9NXV2 234 aa5.87□□□□□ -1.47
CCDC39-205ENST00000485055 FAM8A1Q9UBU6 413 aa5.87□□□□□ -1.47
CCDC39-205ENST00000485055 CNPY2Q9Y2B0 182 aa5.87□□□□□ -1.47
CCDC39-205ENST00000485055 PCDHGB6Q9Y5F9 930 aa5.87□□□□□ -1.47
CCDC39-205ENST00000485055 SIP14410 1827 aa5.87□□□□□ -1.47
CCDC39-205ENST00000485055 TMEM232C9JQI7 657 aa5.86□□□□□ -1.47
CCDC39-205ENST00000485055 HAS3O00219 553 aa5.86□□□□□ -1.47
CCDC39-205ENST00000485055 ZNF213O14771 459 aa5.86□□□□□ -1.47
CCDC39-205ENST00000485055 GSPT1P15170 499 aaKnown RBP5.86□□□□□ -1.47
CCDC39-205ENST00000485055 CYP2C19P33261 490 aa5.86□□□□□ -1.47
CCDC39-205ENST00000485055 LIFRP42702 1097 aa5.86□□□□□ -1.47
CCDC39-205ENST00000485055 MAGEA10P43363 369 aaPredicted RBP5.86□□□□□ -1.47
CCDC39-205ENST00000485055 GABREP78334 506 aa5.86□□□□□ -1.47
CCDC39-205ENST00000485055 AP3B2Q13367 1082 aa5.86□□□□□ -1.47
CCDC39-205ENST00000485055 IMMTQ16891 758 aaKnown RBP5.86□□□□□ -1.47
CCDC39-205ENST00000485055 GPR158Q5T848 1215 aa5.86□□□□□ -1.47
CCDC39-205ENST00000485055 ITPRIPL1Q6GPH6 555 aa5.86□□□□□ -1.47
CCDC39-205ENST00000485055 STOX1Q6ZVD7 989 aa5.86□□□□□ -1.47
CCDC39-205ENST00000485055 FAM126BQ8IXS8 530 aa5.86□□□□□ -1.47
CCDC39-205ENST00000485055 GABPB2Q8TAK5 448 aaPredicted RBP5.86□□□□□ -1.47
CCDC39-205ENST00000485055 HERVK_113Q902F9 699 aa5.86□□□□□ -1.47
CCDC39-205ENST00000485055 ELAC1Q9H777 363 aaKnown RBP5.86□□□□□ -1.47
CCDC39-205ENST00000485055 XPNPEP3Q9NQH7 507 aa5.86□□□□□ -1.47
CCDC39-205ENST00000485055 RNF146Q9NTX7 359 aa5.86□□□□□ -1.47
CCDC39-205ENST00000485055 MKL2Q9ULH7 1088 aa5.86□□□□□ -1.47
CCDC39-205ENST00000485055 ITM2BQ9Y287 266 aa5.86□□□□□ -1.47
CCDC39-205ENST00000485055 HTTP42858 3142 aa5.86□□□□□ -1.47
CCDC39-205ENST00000485055 NEDD4P46934 1319 aa5.86□□□□□ -1.47
CCDC39-205ENST00000485055 P4HA2O15460 535 aa5.86□□□□□ -1.47
CCDC39-205ENST00000485055 PDGFAP04085 211 aa5.86□□□□□ -1.47
CCDC39-205ENST00000485055 RPLP2P05387 115 aaKnown RBP5.86□□□□□ -1.47
CCDC39-205ENST00000485055 CLTBP09497 229 aa5.86□□□□□ -1.47
CCDC39-205ENST00000485055 RPL17P18621 184 aaKnown RBP5.86□□□□□ -1.47
CCDC39-205ENST00000485055 IGFBP4P22692 258 aa5.86□□□□□ -1.47
CCDC39-205ENST00000485055 EVCP57679 992 aa5.86□□□□□ -1.47
CCDC39-205ENST00000485055 DMTNQ08495 405 aa5.86□□□□□ -1.47
CCDC39-205ENST00000485055 FAAP100Q0VG06 881 aa5.86□□□□□ -1.47
CCDC39-205ENST00000485055 CCNG2Q16589 344 aa5.86□□□□□ -1.47
CCDC39-205ENST00000485055 SKOR2Q2VWA4 1001 aaPredicted RBP5.86□□□□□ -1.47
CCDC39-205ENST00000485055 MCTP2Q6DN12 878 aa5.86□□□□□ -1.47
CCDC39-205ENST00000485055 MFSD5Q6N075 450 aa5.86□□□□□ -1.47
CCDC39-205ENST00000485055 GPR155Q7Z3F1 870 aa5.86□□□□□ -1.47
CCDC39-205ENST00000485055 SGMS1Q86VZ5 419 aa5.86□□□□□ -1.47
CCDC39-205ENST00000485055 ETFBKMTQ8IXQ9 262 aa5.86□□□□□ -1.47
CCDC39-205ENST00000485055 MB21D2Q8IYB1 491 aaPredicted RBP5.86□□□□□ -1.47
CCDC39-205ENST00000485055 EXOC6Q8TAG9 804 aa5.86□□□□□ -1.47
CCDC39-205ENST00000485055 ADAM32Q8TC27 787 aa5.86□□□□□ -1.47
CCDC39-205ENST00000485055 DPF3Q92784 378 aa5.86□□□□□ -1.47
CCDC39-205ENST00000485055 RSRC1Q96IZ7 334 aaKnown RBP5.86□□□□□ -1.47
CCDC39-205ENST00000485055 ESYT1Q9BSJ8 1104 aa5.86□□□□□ -1.47
CCDC39-205ENST00000485055 MRPL9Q9BYD2 267 aaKnown RBP5.86□□□□□ -1.47
CCDC39-205ENST00000485055 PCDHB3Q9Y5E6 796 aa5.86□□□□□ -1.47
CCDC39-205ENST00000485055 PITPNM1O00562 1244 aa5.85□□□□□ -1.47
CCDC39-205ENST00000485055 MYBL2P10244 700 aa5.85□□□□□ -1.47
CCDC39-205ENST00000485055 SKILP12757 684 aa5.85□□□□□ -1.47
CCDC39-205ENST00000485055 XBP1P17861 261 aa5.85□□□□□ -1.47
CCDC39-205ENST00000485055 LPOP22079 712 aaPredicted RBP5.85□□□□□ -1.47
CCDC39-205ENST00000485055 SMC1AQ14683 1233 aaKnown RBP5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms