RNA–Protein interactions for RNA: ENST00000484799.1

SMC4-215, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-215ENST00000484799 UGT8Q16880 541 aa5.85□□□□□ -1.47
SMC4-215ENST00000484799 CT47A1Q5JQC4 288 aaPredicted RBP5.85□□□□□ -1.47
SMC4-215ENST00000484799 HDGFL2Q7Z4V5 671 aaPredicted RBP5.85□□□□□ -1.47
SMC4-215ENST00000484799 ULK2Q8IYT8 1036 aa5.85□□□□□ -1.47
SMC4-215ENST00000484799 PIK3C3Q8NEB9 887 aa5.85□□□□□ -1.47
SMC4-215ENST00000484799 PPP1R14CQ8TAE6 165 aa5.85□□□□□ -1.47
SMC4-215ENST00000484799 PROKR1Q8TCW9 393 aa5.85□□□□□ -1.47
SMC4-215ENST00000484799 PDCD2LQ9BRP1 358 aa5.85□□□□□ -1.47
SMC4-215ENST00000484799 EMC7Q9NPA0 242 aa5.85□□□□□ -1.47
SMC4-215ENST00000484799 PRSS50Q9UI38 385 aa5.85□□□□□ -1.47
SMC4-215ENST00000484799 ZBTB21Q9ULJ3 1066 aa5.85□□□□□ -1.47
SMC4-215ENST00000484799 MAPRE3Q9UPY8 281 aa5.85□□□□□ -1.47
SMC4-215ENST00000484799 RHOBTB3O94955 611 aa5.84□□□□□ -1.47
SMC4-215ENST00000484799 ABHD16AO95870 558 aa5.84□□□□□ -1.47
SMC4-215ENST00000484799 LAG3P18627 525 aa5.84□□□□□ -1.47
SMC4-215ENST00000484799 MXRA7P84157 204 aa5.84□□□□□ -1.47
SMC4-215ENST00000484799 SLC25A3Q00325 362 aa5.84□□□□□ -1.47
SMC4-215ENST00000484799 MRPL49Q13405 166 aaKnown RBP5.84□□□□□ -1.47
SMC4-215ENST00000484799 SEPT7Q16181 437 aaKnown RBP5.84□□□□□ -1.47
SMC4-215ENST00000484799 ZBTB41Q5SVQ8 909 aa5.84□□□□□ -1.47
SMC4-215ENST00000484799 EFCAB12Q6NXP0 572 aa5.84□□□□□ -1.47
SMC4-215ENST00000484799 DCLRE1CQ96SD1 692 aaKnown RBP5.84□□□□□ -1.47
SMC4-215ENST00000484799 IFT22Q9H7X7 185 aa5.84□□□□□ -1.47
SMC4-215ENST00000484799 CYP4F11Q9HBI6 524 aa5.84□□□□□ -1.47
SMC4-215ENST00000484799 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.84□□□□□ -1.47
SMC4-215ENST00000484799 FZD1Q9UP38 647 aa5.84□□□□□ -1.47
SMC4-215ENST00000484799 LCHNA4D1U4 455 aa5.83□□□□□ -1.48
SMC4-215ENST00000484799 TRIM24O15164 1050 aa5.83□□□□□ -1.48
SMC4-215ENST00000484799 ZEB2O60315 1214 aa5.83□□□□□ -1.48
SMC4-215ENST00000484799 CPEP16870 476 aa5.83□□□□□ -1.48
SMC4-215ENST00000484799 MGAT1P26572 445 aa5.83□□□□□ -1.48
SMC4-215ENST00000484799 GYS2P54840 703 aa5.83□□□□□ -1.48
SMC4-215ENST00000484799 LGALS4P56470 323 aa5.83□□□□□ -1.48
SMC4-215ENST00000484799 VPS72Q15906 364 aa5.83□□□□□ -1.48
SMC4-215ENST00000484799 CT83Q5H943 113 aa5.83□□□□□ -1.48
SMC4-215ENST00000484799 METTL24Q5JXM2 366 aa5.83□□□□□ -1.48
SMC4-215ENST00000484799 KIAA0907Q7Z7F0 614 aaPredicted RBP5.83□□□□□ -1.48
SMC4-215ENST00000484799 JAZF1Q86VZ6 243 aa5.83□□□□□ -1.48
SMC4-215ENST00000484799 TRPM5Q9NZQ8 1165 aa5.83□□□□□ -1.48
SMC4-215ENST00000484799 TRPS1Q9UHF7 1281 aa5.83□□□□□ -1.48
SMC4-215ENST00000484799 PPP2R3BQ9Y5P8 575 aa5.83□□□□□ -1.48
SMC4-215ENST00000484799 A0A1W2PR48 441 aa5.82□□□□□ -1.48
SMC4-215ENST00000484799 SEC24DO94855 1032 aaPredicted RBP5.82□□□□□ -1.48
SMC4-215ENST00000484799 ITGB1P05556 798 aa5.82□□□□□ -1.48
SMC4-215ENST00000484799 LPLP06858 475 aa5.82□□□□□ -1.48
SMC4-215ENST00000484799 MANFP55145 182 aaKnown RBP5.82□□□□□ -1.48
SMC4-215ENST00000484799 SESN3P58005 492 aa5.82□□□□□ -1.48
SMC4-215ENST00000484799 MEF2AQ02078 507 aaPredicted RBP5.82□□□□□ -1.48
SMC4-215ENST00000484799 STRN3Q13033 797 aa5.82□□□□□ -1.48
SMC4-215ENST00000484799 NAIF1Q69YI7 327 aaPredicted RBP5.82□□□□□ -1.48
SMC4-215ENST00000484799 XYLT1Q86Y38 959 aa5.82□□□□□ -1.48
SMC4-215ENST00000484799 DNAJC10Q8IXB1 793 aa5.82□□□□□ -1.48
SMC4-215ENST00000484799 ACAP3Q96P50 834 aa5.82□□□□□ -1.48
SMC4-215ENST00000484799 NDC1Q9BTX1 674 aa5.82□□□□□ -1.48
SMC4-215ENST00000484799 MS4A5Q9H3V2 200 aa5.82□□□□□ -1.48
SMC4-215ENST00000484799 GPRC5BQ9NZH0 403 aa5.82□□□□□ -1.48
SMC4-215ENST00000484799 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.82□□□□□ -1.48
SMC4-215ENST00000484799 PHF2O75151 1096 aa5.81□□□□□ -1.48
SMC4-215ENST00000484799 HLA-DOAP06340 250 aa5.81□□□□□ -1.48
SMC4-215ENST00000484799 SPATA31D3P0C874 917 aa5.81□□□□□ -1.48
SMC4-215ENST00000484799 RBP3P10745 1247 aa5.81□□□□□ -1.48
SMC4-215ENST00000484799 SOX5P35711 763 aa5.81□□□□□ -1.48
SMC4-215ENST00000484799 DHCR24Q15392 516 aa5.81□□□□□ -1.48
SMC4-215ENST00000484799 C19orf54Q5BKX5 351 aa5.81□□□□□ -1.48
SMC4-215ENST00000484799 SPATA31D4Q6ZUB0 917 aa5.81□□□□□ -1.48
SMC4-215ENST00000484799 ZNF627Q7L945 461 aa5.81□□□□□ -1.48
SMC4-215ENST00000484799 LCORLQ8N3X6 602 aa5.81□□□□□ -1.48
SMC4-215ENST00000484799 LENG9Q96B70 501 aa5.81□□□□□ -1.48
SMC4-215ENST00000484799 EAF2Q96CJ1 260 aaPredicted RBP5.81□□□□□ -1.48
SMC4-215ENST00000484799 RAX2Q96IS3 184 aa5.81□□□□□ -1.48
SMC4-215ENST00000484799 KCNH6Q9H252 994 aa5.81□□□□□ -1.48
SMC4-215ENST00000484799 EVLQ9UI08 416 aaPredicted RBP5.81□□□□□ -1.48
SMC4-215ENST00000484799 DMRT1Q9Y5R6 373 aa5.81□□□□□ -1.48
SMC4-215ENST00000484799 FAM83GA6ND36 823 aa5.8□□□□□ -1.48
SMC4-215ENST00000484799 GOLGA8AA7E2F4 631 aa5.8□□□□□ -1.48
SMC4-215ENST00000484799 GSG1L2A8MUP6 293 aa5.8□□□□□ -1.48
SMC4-215ENST00000484799 RNASET2O00584 256 aaKnown RBP5.8□□□□□ -1.48
SMC4-215ENST00000484799 FOXN1O15353 648 aa5.8□□□□□ -1.48
SMC4-215ENST00000484799 GASTP01350 101 aa5.8□□□□□ -1.48
SMC4-215ENST00000484799 GCP02774 474 aa5.8□□□□□ -1.48
SMC4-215ENST00000484799 PTPN7P35236 360 aa5.8□□□□□ -1.48
SMC4-215ENST00000484799 USP14P54578 494 aa5.8□□□□□ -1.48
SMC4-215ENST00000484799 PER3P56645 1201 aa5.8□□□□□ -1.48
SMC4-215ENST00000484799 CDK17Q00537 523 aa5.8□□□□□ -1.48
SMC4-215ENST00000484799 HTR3DQ70Z44 454 aa5.8□□□□□ -1.48
SMC4-215ENST00000484799 DOK3Q7L591 496 aa5.8□□□□□ -1.48
SMC4-215ENST00000484799 MRGPREQ86SM8 312 aa5.8□□□□□ -1.48
SMC4-215ENST00000484799 MSL3Q8N5Y2 521 aaKnown RBP5.8□□□□□ -1.48
SMC4-215ENST00000484799 ZFP28Q8NHY6 868 aa5.8□□□□□ -1.48
SMC4-215ENST00000484799 SNX33Q8WV41 574 aa5.8□□□□□ -1.48
SMC4-215ENST00000484799 CRAMP1Q96RY5 1269 aa5.8□□□□□ -1.48
SMC4-215ENST00000484799 FDXACB1Q9BRP7 624 aaPredicted RBP5.8□□□□□ -1.48
SMC4-215ENST00000484799 KCTD10Q9H3F6 313 aa5.8□□□□□ -1.48
SMC4-215ENST00000484799 TMA7Q9Y2S6 64 aaKnown RBP5.8□□□□□ -1.48
SMC4-215ENST00000484799 RPTORQ8N122 1335 aa5.79□□□□□ -1.48
SMC4-215ENST00000484799 B5MCH6 92 aa5.79□□□□□ -1.48
SMC4-215ENST00000484799 ENPP3O14638 875 aa5.79□□□□□ -1.48
SMC4-215ENST00000484799 AKR1B10O60218 316 aa5.79□□□□□ -1.48
SMC4-215ENST00000484799 ITGA10O75578 1167 aa5.79□□□□□ -1.48
SMC4-215ENST00000484799 APOBEC3AP31941 199 aaPredicted RBP5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms