RNA–Protein interactions for RNA: ENST00000484328.1

NCL-209, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 369 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-209ENST00000484328 PPIGQ13427 754 aaKnown RBP eCLIP7.05□□□□□ -1.28
NCL-209ENST00000484328 NFIL3Q16649 462 aa7.05□□□□□ -1.28
NCL-209ENST00000484328 KNOP1Q1ED39 458 aaKnown RBP7.05□□□□□ -1.28
NCL-209ENST00000484328 ZSCAN23Q3MJ62 389 aa7.05□□□□□ -1.28
NCL-209ENST00000484328 UBXN11Q5T124 520 aa7.05□□□□□ -1.28
NCL-209ENST00000484328 EEF1DP3Q658K8 133 aa7.05□□□□□ -1.28
NCL-209ENST00000484328 CENPPQ6IPU0 288 aa7.05□□□□□ -1.28
NCL-209ENST00000484328 CNKSR3Q6P9H4 555 aa7.05□□□□□ -1.28
NCL-209ENST00000484328 C16orf59Q7L2K0 433 aa7.05□□□□□ -1.28
NCL-209ENST00000484328 CATSPER4Q7RTX7 472 aa7.05□□□□□ -1.28
NCL-209ENST00000484328 ZC3H3Q8IXZ2 948 aaKnown RBP7.05□□□□□ -1.28
NCL-209ENST00000484328 SMYD4Q8IYR2 804 aaPredicted RBP7.05□□□□□ -1.28
NCL-209ENST00000484328 CRIPAKQ8N1N5 446 aa7.05□□□□□ -1.28
NCL-209ENST00000484328 MLKLQ8NB16 471 aa7.05□□□□□ -1.28
NCL-209ENST00000484328 BADQ92934 168 aa7.05□□□□□ -1.28
NCL-209ENST00000484328 ACCSQ96QU6 501 aa7.05□□□□□ -1.28
NCL-209ENST00000484328 ACO2Q99798 780 aaKnown RBP7.05□□□□□ -1.28
NCL-209ENST00000484328 TARS2Q9BW92 718 aaKnown RBP7.05□□□□□ -1.28
NCL-209ENST00000484328 FTHL17Q9BXU8 183 aa7.05□□□□□ -1.28
NCL-209ENST00000484328 HAPLN2Q9GZV7 340 aa7.05□□□□□ -1.28
NCL-209ENST00000484328 CDT1Q9H211 546 aa7.05□□□□□ -1.28
NCL-209ENST00000484328 IKZF4Q9H2S9 585 aa7.05□□□□□ -1.28
NCL-209ENST00000484328 IL23AQ9NPF7 189 aa7.05□□□□□ -1.28
NCL-209ENST00000484328 AGPAT3Q9NRZ7 376 aa7.05□□□□□ -1.28
NCL-209ENST00000484328 RGS18Q9NS28 235 aa7.05□□□□□ -1.28
NCL-209ENST00000484328 TYW1Q9NV66 732 aaKnown RBP7.05□□□□□ -1.28
NCL-209ENST00000484328 CGNQ9P2M7 1197 aaKnown RBP7.05□□□□□ -1.28
NCL-209ENST00000484328 PRKAG2Q9UGJ0 569 aa7.05□□□□□ -1.28
NCL-209ENST00000484328 EXOC7Q9UPT5 735 aa7.05□□□□□ -1.28
NCL-209ENST00000484328 TRAF3IP3Q9Y228 551 aa7.05□□□□□ -1.28
NCL-209ENST00000484328 PIN4Q9Y237 131 aaKnown RBP7.05□□□□□ -1.28
NCL-209ENST00000484328 KIAA1671Q9BY89 1806 aa7.05□□□□□ -1.28
NCL-209ENST00000484328 TTC3P53804 2025 aa7.05□□□□□ -1.28
NCL-209ENST00000484328 FNDC1Q4ZHG4 1894 aaPredicted RBP7.04□□□□□ -1.28
NCL-209ENST00000484328 GBF1Q92538 1859 aa7.04□□□□□ -1.28
NCL-209ENST00000484328 CEP290O15078 2479 aa7.04□□□□□ -1.28
NCL-209ENST00000484328 A0A0B4J269 797 aa7.04□□□□□ -1.28
NCL-209ENST00000484328 SYCE3A1L190 88 aa7.04□□□□□ -1.28
NCL-209ENST00000484328 TISP43B9A030 160 aa7.04□□□□□ -1.28
NCL-209ENST00000484328 C9IYK1 514 aa7.04□□□□□ -1.28
NCL-209ENST00000484328 ANKRD63C9JTQ0 380 aa7.04□□□□□ -1.28
NCL-209ENST00000484328 RBAK-RBAKDNI3L0D1 243 aa7.04□□□□□ -1.28
NCL-209ENST00000484328 PDXKO00764 312 aa7.04□□□□□ -1.28
NCL-209ENST00000484328 PSMA7O14818 248 aa7.04□□□□□ -1.28
NCL-209ENST00000484328 N4BP3O15049 544 aa7.04□□□□□ -1.28
NCL-209ENST00000484328 MGEA5O60502 916 aa7.04□□□□□ -1.28
NCL-209ENST00000484328 BAIAP3O94812 1187 aa7.04□□□□□ -1.28
NCL-209ENST00000484328 MCF2P10911 925 aa7.04□□□□□ -1.28
NCL-209ENST00000484328 ATF7P17544 494 aaPredicted RBP7.04□□□□□ -1.28
NCL-209ENST00000484328 SYN1P17600 705 aa7.04□□□□□ -1.28
NCL-209ENST00000484328 ADSSP30520 456 aa7.04□□□□□ -1.28
NCL-209ENST00000484328 LIG4P49917 911 aa7.04□□□□□ -1.28
NCL-209ENST00000484328 RAB27AP51159 221 aa7.04□□□□□ -1.28
NCL-209ENST00000484328 EPHB4P54760 987 aa7.04□□□□□ -1.28
NCL-209ENST00000484328 LRRC63Q05C16 580 aa7.04□□□□□ -1.28
NCL-209ENST00000484328 TYRO3Q06418 890 aa7.04□□□□□ -1.28
NCL-209ENST00000484328 MYBPC2Q14324 1141 aa7.04□□□□□ -1.28
NCL-209ENST00000484328 STX1AQ16623 288 aa7.04□□□□□ -1.28
NCL-209ENST00000484328 EDRF1Q3B7T1 1238 aa7.04□□□□□ -1.28
NCL-209ENST00000484328 DCAF4L1Q3SXM0 396 aa7.04□□□□□ -1.28
NCL-209ENST00000484328 ZNF568Q3ZCX4 644 aa7.04□□□□□ -1.28
NCL-209ENST00000484328 CT47A1Q5JQC4 288 aaPredicted RBP7.04□□□□□ -1.28
NCL-209ENST00000484328 ATF7IP2Q5U623 682 aa7.04□□□□□ -1.28
NCL-209ENST00000484328 RASIP1Q5U651 963 aa7.04□□□□□ -1.28
NCL-209ENST00000484328 TTI2Q6NXR4 508 aa7.04□□□□□ -1.28
NCL-209ENST00000484328 NOTUMQ6P988 496 aa7.04□□□□□ -1.28
NCL-209ENST00000484328 SLC27A1Q6PCB7 646 aa7.04□□□□□ -1.28
NCL-209ENST00000484328 PSRC1Q6PGN9 363 aaPredicted RBP7.04□□□□□ -1.28
NCL-209ENST00000484328 MPZL3Q6UWV2 235 aa7.04□□□□□ -1.28
NCL-209ENST00000484328 LRRC55Q6ZSA7 311 aa7.04□□□□□ -1.28
NCL-209ENST00000484328 RTN4RL1Q86UN2 441 aaPredicted RBP7.04□□□□□ -1.28
NCL-209ENST00000484328 SLC9A9Q8IVB4 645 aa7.04□□□□□ -1.28
NCL-209ENST00000484328 DBF4BQ8NFT6 615 aa7.04□□□□□ -1.28
NCL-209ENST00000484328 GOLGA5Q8TBA6 731 aa7.04□□□□□ -1.28
NCL-209ENST00000484328 SEPT8Q92599 483 aa7.04□□□□□ -1.28
NCL-209ENST00000484328 DPF3Q92784 378 aa7.04□□□□□ -1.28
NCL-209ENST00000484328 DHTKD1Q96HY7 919 aaPredicted RBP7.04□□□□□ -1.28
NCL-209ENST00000484328 CPB2Q96IY4 423 aa7.04□□□□□ -1.28
NCL-209ENST00000484328 MED15Q96RN5 788 aa7.04□□□□□ -1.28
NCL-209ENST00000484328 GBP3Q9H0R5 595 aa7.04□□□□□ -1.28
NCL-209ENST00000484328 TSPYL2Q9H2G4 693 aaPredicted RBP7.04□□□□□ -1.28
NCL-209ENST00000484328 SEMA6BQ9H3T3 888 aa7.04□□□□□ -1.28
NCL-209ENST00000484328 C1orf112Q9NSG2 853 aa7.04□□□□□ -1.28
NCL-209ENST00000484328 PCDH10Q9P2E7 1040 aa7.04□□□□□ -1.28
NCL-209ENST00000484328 ZMYND8Q9ULU4 1186 aaPredicted RBP7.04□□□□□ -1.28
NCL-209ENST00000484328 USP20Q9Y2K6 914 aa7.04□□□□□ -1.28
NCL-209ENST00000484328 NR2E3Q9Y5X4 410 aa7.04□□□□□ -1.28
NCL-209ENST00000484328 TDRD15B5MCY1 1934 aaKnown RBP7.03□□□□□ -1.28
NCL-209ENST00000484328 PDE4DIPQ5VU43 2346 aa7.03□□□□□ -1.28
NCL-209ENST00000484328 A0A0U1RQF3 1178 aa7.03□□□□□ -1.28
NCL-209ENST00000484328 ABHD14A-ACY1A0A1B0GW23 586 aa7.03□□□□□ -1.28
NCL-209ENST00000484328 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.03□□□□□ -1.28
NCL-209ENST00000484328 KIAA0391O15091 583 aaKnown RBP7.03□□□□□ -1.28
NCL-209ENST00000484328 INPPL1O15357 1258 aa7.03□□□□□ -1.28
NCL-209ENST00000484328 CLDN3O15551 220 aa7.03□□□□□ -1.28
NCL-209ENST00000484328 EFCAB14O75071 495 aa7.03□□□□□ -1.28
NCL-209ENST00000484328 ZNF623O75123 536 aa7.03□□□□□ -1.28
NCL-209ENST00000484328 GARTP22102 1010 aa7.03□□□□□ -1.28
NCL-209ENST00000484328 CCNE1P24864 410 aa7.03□□□□□ -1.28
NCL-209ENST00000484328 ERCC5P28715 1186 aaPredicted RBP7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms