RNA–Protein interactions for RNA: ENST00000483847.1

SMARCC1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-205ENST00000483847 ADD1P35611 737 aaKnown RBP12.21□□□□□ -0.45
SMARCC1-205ENST00000483847 OR1G1P47890 313 aa12.21□□□□□ -0.45
SMARCC1-205ENST00000483847 DNM2P50570 870 aa12.21□□□□□ -0.45
SMARCC1-205ENST00000483847 JAK3P52333 1124 aa12.21□□□□□ -0.45
SMARCC1-205ENST00000483847 EXOSC10Q01780 885 aaKnown RBP12.21□□□□□ -0.45
SMARCC1-205ENST00000483847 ZNF528Q3MIS6 628 aa12.21□□□□□ -0.45
SMARCC1-205ENST00000483847 XKR3Q5GH77 459 aa12.21□□□□□ -0.45
SMARCC1-205ENST00000483847 LRCH2Q5VUJ6 765 aa12.21□□□□□ -0.45
SMARCC1-205ENST00000483847 PARM1Q6UWI2 310 aa12.21□□□□□ -0.45
SMARCC1-205ENST00000483847 GLYCTKQ8IVS8 523 aa12.21□□□□□ -0.45
SMARCC1-205ENST00000483847 COLGALT2Q8IYK4 626 aa12.21□□□□□ -0.45
SMARCC1-205ENST00000483847 RIT2Q99578 217 aa12.21□□□□□ -0.45
SMARCC1-205ENST00000483847 CNTNAP2Q9UHC6 1331 aa12.2□□□□□ -0.46
SMARCC1-205ENST00000483847 KLF18A0A0U1RQI7 1052 aa12.2□□□□□ -0.46
SMARCC1-205ENST00000483847 KANSL1LA0AUZ9 987 aa12.2□□□□□ -0.46
SMARCC1-205ENST00000483847 SPTLC1O15269 473 aa12.2□□□□□ -0.46
SMARCC1-205ENST00000483847 LAMTOR5O43504 91 aa12.2□□□□□ -0.46
SMARCC1-205ENST00000483847 GAS2O43903 313 aaKnown RBP12.2□□□□□ -0.46
SMARCC1-205ENST00000483847 RPL17P18621 184 aaKnown RBP12.2□□□□□ -0.46
SMARCC1-205ENST00000483847 CD72P21854 359 aa12.2□□□□□ -0.46
SMARCC1-205ENST00000483847 SFNP31947 248 aa12.2□□□□□ -0.46
SMARCC1-205ENST00000483847 NTHL1P78549 312 aa12.2□□□□□ -0.46
SMARCC1-205ENST00000483847 DSG1Q02413 1049 aa12.2□□□□□ -0.46
SMARCC1-205ENST00000483847 CSTF1Q05048 431 aaKnown RBP12.2□□□□□ -0.46
SMARCC1-205ENST00000483847 PLA2G4FQ68DD2 849 aa12.2□□□□□ -0.46
SMARCC1-205ENST00000483847 LILRA6Q6PI73 481 aa12.2□□□□□ -0.46
SMARCC1-205ENST00000483847 ELMSAN1Q6PJG2 1045 aa12.2□□□□□ -0.46
SMARCC1-205ENST00000483847 ANO5Q75V66 913 aa12.2□□□□□ -0.46
SMARCC1-205ENST00000483847 MIER3Q7Z3K6 550 aa12.2□□□□□ -0.46
SMARCC1-205ENST00000483847 SMG8Q8ND04 991 aaKnown RBP12.2□□□□□ -0.46
SMARCC1-205ENST00000483847 HDAC7Q8WUI4 952 aa12.2□□□□□ -0.46
SMARCC1-205ENST00000483847 CCDC136Q96JN2 1154 aa12.2□□□□□ -0.46
SMARCC1-205ENST00000483847 DDX23Q9BUQ8 820 aaKnown RBP12.2□□□□□ -0.46
SMARCC1-205ENST00000483847 TEKT3Q9BXF9 490 aa12.2□□□□□ -0.46
SMARCC1-205ENST00000483847 PRKD2Q9BZL6 878 aa12.2□□□□□ -0.46
SMARCC1-205ENST00000483847 RNF39Q9H2S5 420 aa12.2□□□□□ -0.46
SMARCC1-205ENST00000483847 PLEKHA4Q9H4M7 779 aa12.2□□□□□ -0.46
SMARCC1-205ENST00000483847 C6orf50Q9HD87 102 aa12.2□□□□□ -0.46
SMARCC1-205ENST00000483847 CHST7Q9NS84 486 aa12.2□□□□□ -0.46
SMARCC1-205ENST00000483847 KANSL3Q9P2N6 904 aa12.2□□□□□ -0.46
SMARCC1-205ENST00000483847 DPP7Q9UHL4 492 aa12.2□□□□□ -0.46
SMARCC1-205ENST00000483847 FBXO4Q9UKT5 387 aa12.2□□□□□ -0.46
SMARCC1-205ENST00000483847 SSX2IPQ9Y2D8 614 aa12.2□□□□□ -0.46
SMARCC1-205ENST00000483847 ARL5CA6NH57 179 aa12.19□□□□□ -0.46
SMARCC1-205ENST00000483847 DDX11L8A8MPP1 907 aa12.19□□□□□ -0.46
SMARCC1-205ENST00000483847 PSMD10O75832 226 aa12.19□□□□□ -0.46
SMARCC1-205ENST00000483847 TGM1P22735 817 aa12.19□□□□□ -0.46
SMARCC1-205ENST00000483847 DSC1Q08554 894 aa12.19□□□□□ -0.46
SMARCC1-205ENST00000483847 UBXN2BQ14CS0 331 aa12.19□□□□□ -0.46
SMARCC1-205ENST00000483847 ST3GAL2Q16842 350 aa12.19□□□□□ -0.46
SMARCC1-205ENST00000483847 TSSK4Q6SA08 328 aa12.19□□□□□ -0.46
SMARCC1-205ENST00000483847 B3GNT9Q6UX72 402 aa12.19□□□□□ -0.46
SMARCC1-205ENST00000483847 ZNF579Q8NAF0 562 aaKnown RBP12.19□□□□□ -0.46
SMARCC1-205ENST00000483847 ZBTB44Q8NCP5 570 aa12.19□□□□□ -0.46
SMARCC1-205ENST00000483847 PHKBQ93100 1093 aa12.19□□□□□ -0.46
SMARCC1-205ENST00000483847 SHDQ96IW2 340 aa12.19□□□□□ -0.46
SMARCC1-205ENST00000483847 ZFP42Q96MM3 310 aa12.19□□□□□ -0.46
SMARCC1-205ENST00000483847 GAD1Q99259 594 aa12.19□□□□□ -0.46
SMARCC1-205ENST00000483847 ESYT1Q9BSJ8 1104 aa12.19□□□□□ -0.46
SMARCC1-205ENST00000483847 BCO2Q9BYV7 579 aa12.19□□□□□ -0.46
SMARCC1-205ENST00000483847 GPR62Q9BZJ7 368 aa12.19□□□□□ -0.46
SMARCC1-205ENST00000483847 PARD6AQ9NPB6 346 aa12.19□□□□□ -0.46
SMARCC1-205ENST00000483847 MIOSQ9NXC5 875 aa12.19□□□□□ -0.46
SMARCC1-205ENST00000483847 ZDHHC7Q9NXF8 308 aa12.19□□□□□ -0.46
SMARCC1-205ENST00000483847 SMG5Q9UPR3 1016 aaKnown RBP12.19□□□□□ -0.46
SMARCC1-205ENST00000483847 PCDHGA2Q9Y5H1 932 aa12.19□□□□□ -0.46
SMARCC1-205ENST00000483847 COL4A3BPQ9Y5P4 624 aa12.19□□□□□ -0.46
SMARCC1-205ENST00000483847 TDRD15B5MCY1 1934 aaKnown RBP12.18□□□□□ -0.46
SMARCC1-205ENST00000483847 FAM170BA6NMN3 283 aa12.18□□□□□ -0.46
SMARCC1-205ENST00000483847 LILRB5O75023 590 aa12.18□□□□□ -0.46
SMARCC1-205ENST00000483847 ZMYND10O75800 440 aa12.18□□□□□ -0.46
SMARCC1-205ENST00000483847 SRGAP2CP0DJJ0 459 aa12.18□□□□□ -0.46
SMARCC1-205ENST00000483847 ITGA4P13612 1032 aa12.18□□□□□ -0.46
SMARCC1-205ENST00000483847 NCLP19338 710 aaKnown RBP12.18□□□□□ -0.46
SMARCC1-205ENST00000483847 SDHBP21912 280 aa12.18□□□□□ -0.46
SMARCC1-205ENST00000483847 FSHRP23945 695 aa12.18□□□□□ -0.46
SMARCC1-205ENST00000483847 MLH1P40692 756 aa12.18□□□□□ -0.46
SMARCC1-205ENST00000483847 SCNN1GP51170 649 aa12.18□□□□□ -0.46
SMARCC1-205ENST00000483847 LMNB2Q03252 620 aa12.18□□□□□ -0.46
SMARCC1-205ENST00000483847 MLF2Q15773 248 aaPredicted RBP12.18□□□□□ -0.46
SMARCC1-205ENST00000483847 ADCK5Q3MIX3 580 aa12.18□□□□□ -0.46
SMARCC1-205ENST00000483847 SLC44A4Q53GD3 710 aa12.18□□□□□ -0.46
SMARCC1-205ENST00000483847 GRASPQ7Z6J2 395 aaPredicted RBP12.18□□□□□ -0.46
SMARCC1-205ENST00000483847 PRPF31Q8WWY3 499 aaKnown RBP12.18□□□□□ -0.46
SMARCC1-205ENST00000483847 ATRIPQ8WXE1 791 aa12.18□□□□□ -0.46
SMARCC1-205ENST00000483847 RABGGTAQ92696 567 aa12.18□□□□□ -0.46
SMARCC1-205ENST00000483847 NELL1Q92832 810 aa12.18□□□□□ -0.46
SMARCC1-205ENST00000483847 EIF2AQ9BY44 585 aaKnown RBP12.18□□□□□ -0.46
SMARCC1-205ENST00000483847 EPC1Q9H2F5 836 aa12.18□□□□□ -0.46
SMARCC1-205ENST00000483847 ANO2Q9NQ90 1003 aa12.18□□□□□ -0.46
SMARCC1-205ENST00000483847 CDV3Q9UKY7 258 aaKnown RBP12.18□□□□□ -0.46
SMARCC1-205ENST00000483847 NAP1L2Q9ULW6 460 aaPredicted RBP12.18□□□□□ -0.46
SMARCC1-205ENST00000483847 HES2Q9Y543 173 aa12.18□□□□□ -0.46
SMARCC1-205ENST00000483847 IPPQ9Y573 584 aa12.18□□□□□ -0.46
SMARCC1-205ENST00000483847 PRR5-ARHGAP8B1AHC4 643 aa12.17□□□□□ -0.46
SMARCC1-205ENST00000483847 TDP2O95551 362 aa12.17□□□□□ -0.46
SMARCC1-205ENST00000483847 GNA11P29992 359 aa12.17□□□□□ -0.46
SMARCC1-205ENST00000483847 NPEPPSP55786 919 aa12.17□□□□□ -0.46
SMARCC1-205ENST00000483847 ARHGAP8P85298 464 aa12.17□□□□□ -0.46
SMARCC1-205ENST00000483847 FUT10Q6P4F1 479 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms