RNA–Protein interactions for RNA: ENST00000483495.5

CPNE1-225, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-225ENST00000483495 PNMA6AP0CW24 399 aaPredicted RBP14.36□□□□□ -0.11
CPNE1-225ENST00000483495 ZBTB48P10074 688 aaPredicted RBP14.36□□□□□ -0.11
CPNE1-225ENST00000483495 KLRC1P26715 233 aa14.36□□□□□ -0.11
CPNE1-225ENST00000483495 STRN3Q13033 797 aa14.36□□□□□ -0.11
CPNE1-225ENST00000483495 TTLL4Q14679 1199 aa14.36□□□□□ -0.11
CPNE1-225ENST00000483495 KIF22Q14807 665 aa14.36□□□□□ -0.11
CPNE1-225ENST00000483495 KIAA0753Q2KHM9 967 aa14.36□□□□□ -0.11
CPNE1-225ENST00000483495 KRT39Q6A163 491 aa14.36□□□□□ -0.11
CPNE1-225ENST00000483495 ALKBH5Q6P6C2 394 aaKnown RBP14.36□□□□□ -0.11
CPNE1-225ENST00000483495 ARMCX2Q7L311 632 aa14.36□□□□□ -0.11
CPNE1-225ENST00000483495 ZNF467Q7Z7K2 595 aaPredicted RBP14.36□□□□□ -0.11
CPNE1-225ENST00000483495 DHX37Q8IY37 1157 aaKnown RBP14.36□□□□□ -0.11
CPNE1-225ENST00000483495 ANKRD13CQ8N6S4 541 aa14.36□□□□□ -0.11
CPNE1-225ENST00000483495 SCFD2Q8WU76 684 aa14.36□□□□□ -0.11
CPNE1-225ENST00000483495 BICD1Q96G01 975 aa14.36□□□□□ -0.11
CPNE1-225ENST00000483495 SPATA33Q96N06 139 aa14.36□□□□□ -0.11
CPNE1-225ENST00000483495 INTUQ9ULD6 942 aa14.36□□□□□ -0.11
CPNE1-225ENST00000483495 SNX12Q9UMY4 172 aa14.36□□□□□ -0.11
CPNE1-225ENST00000483495 SIP14410 1827 aa14.36□□□□□ -0.11
CPNE1-225ENST00000483495 CTAGE15A4D2H0 777 aa14.35□□□□□ -0.11
CPNE1-225ENST00000483495 TFRCP02786 760 aaKnown RBP14.35□□□□□ -0.11
CPNE1-225ENST00000483495 CTAGE8P0CG41 777 aa14.35□□□□□ -0.11
CPNE1-225ENST00000483495 TXNP10599 105 aaKnown RBP14.35□□□□□ -0.11
CPNE1-225ENST00000483495 LIG4P49917 911 aa14.35□□□□□ -0.11
CPNE1-225ENST00000483495 CLDN10P78369 228 aa14.35□□□□□ -0.11
CPNE1-225ENST00000483495 TEX35Q5T0J7 233 aa14.35□□□□□ -0.11
CPNE1-225ENST00000483495 IER5Q5VY09 327 aa14.35□□□□□ -0.11
CPNE1-225ENST00000483495 SPRYD7Q5W111 196 aa14.35□□□□□ -0.11
CPNE1-225ENST00000483495 CTAGE6Q86UF2 777 aa14.35□□□□□ -0.11
CPNE1-225ENST00000483495 CTAGE4Q8IX94 777 aa14.35□□□□□ -0.11
CPNE1-225ENST00000483495 PSPC1Q8WXF1 523 aaKnown RBP14.35□□□□□ -0.11
CPNE1-225ENST00000483495 GLG1Q92896 1179 aa14.35□□□□□ -0.11
CPNE1-225ENST00000483495 PACSIN1Q9BY11 444 aa14.35□□□□□ -0.11
CPNE1-225ENST00000483495 PUF60Q9UHX1 559 aaKnown RBP14.35□□□□□ -0.11
CPNE1-225ENST00000483495 PCDHGC5Q9Y5F6 944 aa14.35□□□□□ -0.11
CPNE1-225ENST00000483495 RBM47A0AV96 593 aaKnown RBP14.35□□□□□ -0.11
CPNE1-225ENST00000483495 LRRIQ4A6NIV6 560 aa14.35□□□□□ -0.11
CPNE1-225ENST00000483495 ZNF233A6NK53 670 aa14.35□□□□□ -0.11
CPNE1-225ENST00000483495 K7ERI5 159 aa14.35□□□□□ -0.11
CPNE1-225ENST00000483495 ADCY3O60266 1144 aa14.35□□□□□ -0.11
CPNE1-225ENST00000483495 ADORA2AP29274 412 aa14.35□□□□□ -0.11
CPNE1-225ENST00000483495 GPC3P51654 580 aa14.35□□□□□ -0.11
CPNE1-225ENST00000483495 CAPSQ13938 189 aa14.35□□□□□ -0.11
CPNE1-225ENST00000483495 PLCB4Q15147 1175 aa14.35□□□□□ -0.11
CPNE1-225ENST00000483495 SLFN12LQ6IEE8 588 aa14.35□□□□□ -0.11
CPNE1-225ENST00000483495 ARHGEF19Q8IW93 802 aa14.35□□□□□ -0.11
CPNE1-225ENST00000483495 C2orf69Q8N8R5 385 aa14.35□□□□□ -0.11
CPNE1-225ENST00000483495 SMARCAD1Q9H4L7 1026 aa14.35□□□□□ -0.11
CPNE1-225ENST00000483495 VTA1Q9NP79 307 aa14.35□□□□□ -0.11
CPNE1-225ENST00000483495 UBE2TQ9NPD8 197 aaPredicted RBP14.35□□□□□ -0.11
CPNE1-225ENST00000483495 PDGFCQ9NRA1 345 aa14.35□□□□□ -0.11
CPNE1-225ENST00000483495 FOXN3O00409 490 aaPredicted RBP14.34□□□□□ -0.11
CPNE1-225ENST00000483495 LRRN2O75325 713 aa14.34□□□□□ -0.11
CPNE1-225ENST00000483495 ZSCAN20P17040 1043 aaPredicted RBP14.34□□□□□ -0.11
CPNE1-225ENST00000483495 PSMD6Q15008 389 aa14.34□□□□□ -0.11
CPNE1-225ENST00000483495 CDCA2Q69YH5 1023 aaPredicted RBP14.34□□□□□ -0.11
CPNE1-225ENST00000483495 TAPT1Q6NXT6 567 aa14.34□□□□□ -0.11
CPNE1-225ENST00000483495 TRIM50Q86XT4 487 aa14.34□□□□□ -0.11
CPNE1-225ENST00000483495 LNX1Q8TBB1 728 aaPredicted RBP14.34□□□□□ -0.11
CPNE1-225ENST00000483495 TCP11Q8WWU5 503 aa14.34□□□□□ -0.11
CPNE1-225ENST00000483495 SEMA4DQ92854 862 aa14.34□□□□□ -0.11
CPNE1-225ENST00000483495 COPS5Q92905 334 aa14.34□□□□□ -0.11
CPNE1-225ENST00000483495 CCDC127Q96BQ5 260 aa14.34□□□□□ -0.11
CPNE1-225ENST00000483495 RPGRIP1Q96KN7 1286 aa14.34□□□□□ -0.11
CPNE1-225ENST00000483495 FAM213AQ9BRX8 229 aa14.34□□□□□ -0.11
CPNE1-225ENST00000483495 ZNFX1Q9P2E3 1918 aaKnown RBP14.34□□□□□ -0.11
CPNE1-225ENST00000483495 A0A0A6YYK5 440 aaPredicted RBP14.33□□□□□ -0.11
CPNE1-225ENST00000483495 BUB1O43683 1085 aa14.33□□□□□ -0.11
CPNE1-225ENST00000483495 SRGAP2O75044 1071 aa14.33□□□□□ -0.11
CPNE1-225ENST00000483495 CELF2O95319 508 aaKnown RBP14.33□□□□□ -0.11
CPNE1-225ENST00000483495 EFNA5P52803 228 aa14.33□□□□□ -0.11
CPNE1-225ENST00000483495 MAP2K1Q02750 393 aaPredicted RBP14.33□□□□□ -0.11
CPNE1-225ENST00000483495 CKAP4Q07065 602 aaKnown RBP14.33□□□□□ -0.11
CPNE1-225ENST00000483495 ARHGAP1Q07960 439 aa14.33□□□□□ -0.11
CPNE1-225ENST00000483495 MKRN4PQ13434 485 aaPredicted RBP14.33□□□□□ -0.11
CPNE1-225ENST00000483495 DRP2Q13474 957 aa14.33□□□□□ -0.11
CPNE1-225ENST00000483495 ARHGAP44Q17R89 818 aa14.33□□□□□ -0.11
CPNE1-225ENST00000483495 MAMDC4Q6UXC1 1216 aa14.33□□□□□ -0.11
CPNE1-225ENST00000483495 C15orf39Q6ZRI6 1047 aa14.33□□□□□ -0.11
CPNE1-225ENST00000483495 SV2AQ7L0J3 742 aa14.33□□□□□ -0.11
CPNE1-225ENST00000483495 FBXL13Q8NEE6 735 aa14.33□□□□□ -0.11
CPNE1-225ENST00000483495 PRPF31Q8WWY3 499 aaKnown RBP14.33□□□□□ -0.11
CPNE1-225ENST00000483495 EMID1Q96A84 441 aaPredicted RBP14.33□□□□□ -0.11
CPNE1-225ENST00000483495 PARK7Q99497 189 aaKnown RBP14.33□□□□□ -0.11
CPNE1-225ENST00000483495 POP1Q99575 1024 aaKnown RBP14.33□□□□□ -0.11
CPNE1-225ENST00000483495 JPH2Q9BR39 696 aaPredicted RBP14.33□□□□□ -0.11
CPNE1-225ENST00000483495 HAPLN2Q9GZV7 340 aa14.33□□□□□ -0.11
CPNE1-225ENST00000483495 KATNBL1Q9H079 304 aa14.33□□□□□ -0.11
CPNE1-225ENST00000483495 TSKSQ9UJT2 592 aa14.33□□□□□ -0.11
CPNE1-225ENST00000483495 AGO2Q9UKV8 859 aaKnown RBP14.33□□□□□ -0.11
CPNE1-225ENST00000483495 ADGRA2Q96PE1 1338 aa14.33□□□□□ -0.12
CPNE1-225ENST00000483495 A0A0B4J269 797 aa14.33□□□□□ -0.12
CPNE1-225ENST00000483495 HBP1O60381 514 aa14.33□□□□□ -0.12
CPNE1-225ENST00000483495 LDHAP00338 332 aaKnown RBP14.33□□□□□ -0.12
CPNE1-225ENST00000483495 H2AFZP0C0S5 128 aa14.33□□□□□ -0.12
CPNE1-225ENST00000483495 TCP1P17987 556 aaKnown RBP14.33□□□□□ -0.12
CPNE1-225ENST00000483495 MARK3P27448 753 aa14.33□□□□□ -0.12
CPNE1-225ENST00000483495 MKRN3Q13064 507 aaKnown RBP14.33□□□□□ -0.12
CPNE1-225ENST00000483495 LAMC2Q13753 1193 aa14.33□□□□□ -0.12
CPNE1-225ENST00000483495 MXD4Q14582 209 aaPredicted RBP14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms