RNA–Protein interactions for RNA: ENST00000483275.1

VARS-226, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-226ENST00000483275 CCDC149Q6ZUS6 474 aa15.52■□□□□ 0.08
VARS-226ENST00000483275 SRGAP1Q7Z6B7 1085 aa15.52■□□□□ 0.08
VARS-226ENST00000483275 FERMT3Q86UX7 667 aa15.52■□□□□ 0.08
VARS-226ENST00000483275 CDR2LQ86X02 465 aaPredicted RBP15.52■□□□□ 0.08
VARS-226ENST00000483275 ST13P5Q8NFI4 369 aaPredicted RBP15.52■□□□□ 0.08
VARS-226ENST00000483275 ASAP3Q8TDY4 903 aa15.52■□□□□ 0.08
VARS-226ENST00000483275 FAM20AQ96MK3 541 aa15.52■□□□□ 0.08
VARS-226ENST00000483275 GAD1Q99259 594 aa15.52■□□□□ 0.08
VARS-226ENST00000483275 EMILIN2Q9BXX0 1053 aa15.52■□□□□ 0.08
VARS-226ENST00000483275 IPPQ9Y573 584 aa15.52■□□□□ 0.08
VARS-226ENST00000483275 ZNF292O60281 2723 aa15.52■□□□□ 0.08
VARS-226ENST00000483275 MTCL1Q9Y4B5 1905 aaKnown RBP15.52■□□□□ 0.07
VARS-226ENST00000483275 ARL5CA6NH57 179 aa15.51■□□□□ 0.07
VARS-226ENST00000483275 B4GALT5O43286 388 aa15.51■□□□□ 0.07
VARS-226ENST00000483275 LILRB3O75022 631 aa15.51■□□□□ 0.07
VARS-226ENST00000483275 RFPL2O75678 378 aa15.51■□□□□ 0.07
VARS-226ENST00000483275 ERLIN2O94905 339 aa15.51■□□□□ 0.07
VARS-226ENST00000483275 CTDNEP1O95476 244 aa15.51■□□□□ 0.07
VARS-226ENST00000483275 URODP06132 367 aa15.51■□□□□ 0.07
VARS-226ENST00000483275 ITGA4P13612 1032 aa15.51■□□□□ 0.07
VARS-226ENST00000483275 NCLP19338 710 aaKnown RBP15.51■□□□□ 0.07
VARS-226ENST00000483275 GIT2Q14161 759 aa15.51■□□□□ 0.07
VARS-226ENST00000483275 PPP4R3AQ6IN85 833 aa15.51■□□□□ 0.07
VARS-226ENST00000483275 GLYCTKQ8IVS8 523 aa15.51■□□□□ 0.07
VARS-226ENST00000483275 TPH2Q8IWU9 490 aa15.51■□□□□ 0.07
VARS-226ENST00000483275 COLGALT2Q8IYK4 626 aa15.51■□□□□ 0.07
VARS-226ENST00000483275 RSAD2Q8WXG1 361 aa15.51■□□□□ 0.07
VARS-226ENST00000483275 MTRQ99707 1265 aa15.51■□□□□ 0.07
VARS-226ENST00000483275 HERC2P3Q9BVR0 1158 aa15.51■□□□□ 0.07
VARS-226ENST00000483275 NXF3Q9H4D5 531 aaKnown RBP15.51■□□□□ 0.07
VARS-226ENST00000483275 MRPL17Q9NRX2 175 aaKnown RBP15.51■□□□□ 0.07
VARS-226ENST00000483275 MIOSQ9NXC5 875 aa15.51■□□□□ 0.07
VARS-226ENST00000483275 TPCN1Q9ULQ1 816 aa15.51■□□□□ 0.07
VARS-226ENST00000483275 COL4A3Q01955 1670 aa15.51■□□□□ 0.07
VARS-226ENST00000483275 STK36Q9NRP7 1315 aa15.5■□□□□ 0.07
VARS-226ENST00000483275 CNTNAP2Q9UHC6 1331 aa15.5■□□□□ 0.07
VARS-226ENST00000483275 INO80B-WBP1J3KQ70 363 aa15.5■□□□□ 0.07
VARS-226ENST00000483275 TEX28O15482 410 aa15.5■□□□□ 0.07
VARS-226ENST00000483275 PI15O43692 258 aa15.5■□□□□ 0.07
VARS-226ENST00000483275 SOD2P04179 222 aa15.5■□□□□ 0.07
VARS-226ENST00000483275 GCFC2P16383 781 aaKnown RBP15.5■□□□□ 0.07
VARS-226ENST00000483275 CAPSQ13938 189 aa15.5■□□□□ 0.07
VARS-226ENST00000483275 EPHA7Q15375 998 aa15.5■□□□□ 0.07
VARS-226ENST00000483275 FRMD5Q7Z6J6 570 aa15.5■□□□□ 0.07
VARS-226ENST00000483275 PPFIBP1Q86W92 1011 aa15.5■□□□□ 0.07
VARS-226ENST00000483275 C4orf19Q8IY42 314 aa15.5■□□□□ 0.07
VARS-226ENST00000483275 SIX5Q8N196 739 aa15.5■□□□□ 0.07
VARS-226ENST00000483275 NECAB1Q8N987 351 aa15.5■□□□□ 0.07
VARS-226ENST00000483275 RSPH1Q8WYR4 309 aa15.5■□□□□ 0.07
VARS-226ENST00000483275 RPS6KC1Q96S38 1066 aa15.5■□□□□ 0.07
VARS-226ENST00000483275 TMEM175Q9BSA9 504 aa15.5■□□□□ 0.07
VARS-226ENST00000483275 TM6SF1Q9BZW5 370 aa15.5■□□□□ 0.07
VARS-226ENST00000483275 USTQ9Y2C2 406 aa15.5■□□□□ 0.07
VARS-226ENST00000483275 DMXL1Q9Y485 3027 aa15.5■□□□□ 0.07
VARS-226ENST00000483275 LARGE1O95461 756 aa15.49■□□□□ 0.07
VARS-226ENST00000483275 ALDH2P05091 517 aa15.49■□□□□ 0.07
VARS-226ENST00000483275 NPR3P17342 541 aa15.49■□□□□ 0.07
VARS-226ENST00000483275 RPL17P18621 184 aaKnown RBP15.49■□□□□ 0.07
VARS-226ENST00000483275 AKAP5P24588 427 aa15.49■□□□□ 0.07
VARS-226ENST00000483275 GLUD2P49448 558 aa15.49■□□□□ 0.07
VARS-226ENST00000483275 MBTD1Q05BQ5 628 aa15.49■□□□□ 0.07
VARS-226ENST00000483275 AMHR2Q16671 573 aa15.49■□□□□ 0.07
VARS-226ENST00000483275 OTOP3Q7RTS5 596 aa15.49■□□□□ 0.07
VARS-226ENST00000483275 PLCD3Q8N3E9 789 aa15.49■□□□□ 0.07
VARS-226ENST00000483275 ACSF2Q96CM8 615 aaPredicted RBP15.49■□□□□ 0.07
VARS-226ENST00000483275 EIF2AK1Q9BQI3 630 aaKnown RBP15.49■□□□□ 0.07
VARS-226ENST00000483275 ZSWIM4Q9H7M6 989 aa15.49■□□□□ 0.07
VARS-226ENST00000483275 KCNK12Q9HB15 430 aa15.49■□□□□ 0.07
VARS-226ENST00000483275 KLK14Q9P0G3 267 aa15.49■□□□□ 0.07
VARS-226ENST00000483275 ORC3Q9UBD5 711 aaPredicted RBP15.49■□□□□ 0.07
VARS-226ENST00000483275 FBXL21Q9UKT6 434 aa15.49■□□□□ 0.07
VARS-226ENST00000483275 VWA8A3KMH1 1905 aa15.49■□□□□ 0.07
VARS-226ENST00000483275 MYH15Q9Y2K3 1946 aa15.49■□□□□ 0.07
VARS-226ENST00000483275 DCHS1Q96JQ0 3298 aa15.48■□□□□ 0.07
VARS-226ENST00000483275 CCDC195A0A1B0GUA6 201 aa15.48■□□□□ 0.07
VARS-226ENST00000483275 PRR23AA6NEV1 266 aa15.48■□□□□ 0.07
VARS-226ENST00000483275 INPPL1O15357 1258 aa15.48■□□□□ 0.07
VARS-226ENST00000483275 PFKFB2O60825 505 aa15.48■□□□□ 0.07
VARS-226ENST00000483275 DKC1O60832 514 aaKnown RBP eCLIP15.48■□□□□ 0.07
VARS-226ENST00000483275 CDKL5O76039 1030 aa15.48■□□□□ 0.07
VARS-226ENST00000483275 NPTXRO95502 500 aa15.48■□□□□ 0.07
VARS-226ENST00000483275 GLUD1P00367 558 aa15.48■□□□□ 0.07
VARS-226ENST00000483275 CFHP08603 1231 aa15.48■□□□□ 0.07
VARS-226ENST00000483275 ARF4P18085 180 aaPredicted RBP15.48■□□□□ 0.07
VARS-226ENST00000483275 GBP2P32456 591 aaPredicted RBP15.48■□□□□ 0.07
VARS-226ENST00000483275 PTENP60484 403 aa15.48■□□□□ 0.07
VARS-226ENST00000483275 DSC1Q08554 894 aa15.48■□□□□ 0.07
VARS-226ENST00000483275 TDGQ13569 410 aa15.48■□□□□ 0.07
VARS-226ENST00000483275 NOTUMQ6P988 496 aa15.48■□□□□ 0.07
VARS-226ENST00000483275 PALB2Q86YC2 1186 aa15.48■□□□□ 0.07
VARS-226ENST00000483275 PIGOQ8TEQ8 1089 aa15.48■□□□□ 0.07
VARS-226ENST00000483275 HASPINQ8TF76 798 aa15.48■□□□□ 0.07
VARS-226ENST00000483275 TCP11Q8WWU5 503 aa15.48■□□□□ 0.07
VARS-226ENST00000483275 TNFRSF25Q93038 417 aa15.48■□□□□ 0.07
VARS-226ENST00000483275 MYADMQ96S97 322 aa15.48■□□□□ 0.07
VARS-226ENST00000483275 CSRNP2Q9H175 543 aa15.48■□□□□ 0.07
VARS-226ENST00000483275 POLR3FQ9H1D9 316 aaPredicted RBP15.48■□□□□ 0.07
VARS-226ENST00000483275 GPRC5CQ9NQ84 441 aa15.48■□□□□ 0.07
VARS-226ENST00000483275 KANSL3Q9P2N6 904 aa15.48■□□□□ 0.07
VARS-226ENST00000483275 TRIP11Q15643 1979 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms