RNA–Protein interactions for RNA: ENST00000482878.5

CCDC78-213, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 3,458 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-213ENST00000482878 GSTA1P08263 222 aa13.34□□□□□ -0.27
CCDC78-213ENST00000482878 ZNF76P36508 570 aa13.34□□□□□ -0.27
CCDC78-213ENST00000482878 ZNF211Q13398 564 aaPredicted RBP13.34□□□□□ -0.27
CCDC78-213ENST00000482878 APOBEC3HQ6NTF7 200 aaKnown RBP13.34□□□□□ -0.27
CCDC78-213ENST00000482878 CHADLQ6NUI6 762 aa13.34□□□□□ -0.27
CCDC78-213ENST00000482878 FAM186BQ8IYM0 893 aa13.34□□□□□ -0.27
CCDC78-213ENST00000482878 RFFLQ8WZ73 363 aa13.34□□□□□ -0.27
CCDC78-213ENST00000482878 FMO2Q99518 471 aa13.34□□□□□ -0.27
CCDC78-213ENST00000482878 EPAS1Q99814 870 aa13.34□□□□□ -0.27
CCDC78-213ENST00000482878 EIF2AK1Q9BQI3 630 aaKnown RBP13.34□□□□□ -0.27
CCDC78-213ENST00000482878 GPR88Q9GZN0 384 aa13.34□□□□□ -0.27
CCDC78-213ENST00000482878 TAS2R14Q9NYV8 317 aa13.34□□□□□ -0.27
CCDC78-213ENST00000482878 DNAJC12Q9UKB3 198 aa13.34□□□□□ -0.27
CCDC78-213ENST00000482878 TTC7AQ9ULT0 858 aaPredicted RBP13.34□□□□□ -0.27
CCDC78-213ENST00000482878 RABGAP1Q9Y3P9 1069 aa13.34□□□□□ -0.27
CCDC78-213ENST00000482878 C2CD2Q9Y426 696 aa13.34□□□□□ -0.27
CCDC78-213ENST00000482878 C10orf71Q711Q0 1435 aa13.34□□□□□ -0.27
CCDC78-213ENST00000482878 ZBTB39O15060 712 aa13.34□□□□□ -0.27
CCDC78-213ENST00000482878 HOXA13P31271 388 aaPredicted RBP13.34□□□□□ -0.27
CCDC78-213ENST00000482878 UBXN2AP68543 259 aa13.34□□□□□ -0.27
CCDC78-213ENST00000482878 CBWD6Q4V339 395 aa13.34□□□□□ -0.27
CCDC78-213ENST00000482878 CBWD3Q5JTY5 395 aa13.34□□□□□ -0.27
CCDC78-213ENST00000482878 CBWD5Q5RIA9 395 aa13.34□□□□□ -0.27
CCDC78-213ENST00000482878 RINT1Q6NUQ1 792 aa13.34□□□□□ -0.27
CCDC78-213ENST00000482878 ARHGAP22Q7Z5H3 698 aa13.34□□□□□ -0.27
CCDC78-213ENST00000482878 PALB2Q86YC2 1186 aa13.34□□□□□ -0.27
CCDC78-213ENST00000482878 GLG1Q92896 1179 aa13.34□□□□□ -0.27
CCDC78-213ENST00000482878 SYT11Q9BT88 431 aa13.34□□□□□ -0.27
CCDC78-213ENST00000482878 TXLNGYQ9BZA5 131 aa13.34□□□□□ -0.27
CCDC78-213ENST00000482878 A0A1B0GVG6 124 aa13.34□□□□□ -0.27
CCDC78-213ENST00000482878 SPDYE3A6NKU9 549 aa13.34□□□□□ -0.27
CCDC78-213ENST00000482878 PAEPP09466 180 aa13.34□□□□□ -0.27
CCDC78-213ENST00000482878 SREBF1P36956 1147 aa13.34□□□□□ -0.27
CCDC78-213ENST00000482878 PTENP60484 403 aa13.34□□□□□ -0.27
CCDC78-213ENST00000482878 CUL3Q13618 768 aa13.34□□□□□ -0.27
CCDC78-213ENST00000482878 PLS1Q14651 629 aa13.34□□□□□ -0.27
CCDC78-213ENST00000482878 SIAH1Q8IUQ4 282 aa13.34□□□□□ -0.27
CCDC78-213ENST00000482878 UHMK1Q8TAS1 419 aaKnown RBP13.34□□□□□ -0.27
CCDC78-213ENST00000482878 STK33Q9BYT3 514 aa13.34□□□□□ -0.27
CCDC78-213ENST00000482878 INTS9Q9NV88 658 aaKnown RBP13.34□□□□□ -0.27
CCDC78-213ENST00000482878 PPFIA2O75334 1257 aa13.33□□□□□ -0.27
CCDC78-213ENST00000482878 EYA4O95677 639 aa13.33□□□□□ -0.27
CCDC78-213ENST00000482878 SHBGP04278 402 aa13.33□□□□□ -0.27
CCDC78-213ENST00000482878 TMEM253P0C7T8 217 aa13.33□□□□□ -0.27
CCDC78-213ENST00000482878 PSMC2P35998 433 aaKnown RBP13.33□□□□□ -0.27
CCDC78-213ENST00000482878 FMO5P49326 533 aa13.33□□□□□ -0.27
CCDC78-213ENST00000482878 CTTNQ14247 550 aaKnown RBP13.33□□□□□ -0.27
CCDC78-213ENST00000482878 MGARPQ8TDB4 240 aa13.33□□□□□ -0.27
CCDC78-213ENST00000482878 IFT74Q96LB3 600 aa13.33□□□□□ -0.27
CCDC78-213ENST00000482878 FAM20AQ96MK3 541 aa13.33□□□□□ -0.27
CCDC78-213ENST00000482878 AMNQ9BXJ7 453 aa13.33□□□□□ -0.27
CCDC78-213ENST00000482878 FAM129AQ9BZQ8 928 aa13.33□□□□□ -0.27
CCDC78-213ENST00000482878 EPB41L4BQ9H329 900 aa13.33□□□□□ -0.27
CCDC78-213ENST00000482878 OLFML3Q9NRN5 406 aa13.33□□□□□ -0.27
CCDC78-213ENST00000482878 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.33□□□□□ -0.27
CCDC78-213ENST00000482878 RPS6KL1Q9Y6S9 549 aa13.33□□□□□ -0.27
CCDC78-213ENST00000482878 MYH4Q9Y623 1939 aa13.33□□□□□ -0.28
CCDC78-213ENST00000482878 NCANO14594 1321 aa13.33□□□□□ -0.28
CCDC78-213ENST00000482878 TCP10L2B9ZVM9 353 aa13.33□□□□□ -0.28
CCDC78-213ENST00000482878 LMNB1P20700 586 aa13.33□□□□□ -0.28
CCDC78-213ENST00000482878 DR1Q01658 176 aa13.33□□□□□ -0.28
CCDC78-213ENST00000482878 PPP1R15BQ5SWA1 713 aa13.33□□□□□ -0.28
CCDC78-213ENST00000482878 HHATQ5VTY9 493 aa13.33□□□□□ -0.28
CCDC78-213ENST00000482878 LONP2Q86WA8 852 aa13.33□□□□□ -0.28
CCDC78-213ENST00000482878 MYCT1Q8N699 235 aa13.33□□□□□ -0.28
CCDC78-213ENST00000482878 SLC17A8Q8NDX2 589 aa13.33□□□□□ -0.28
CCDC78-213ENST00000482878 DCAF4Q8WV16 495 aa13.33□□□□□ -0.28
CCDC78-213ENST00000482878 CTNNBL1Q8WYA6 563 aaPredicted RBP13.33□□□□□ -0.28
CCDC78-213ENST00000482878 MKL1Q969V6 931 aa13.33□□□□□ -0.28
CCDC78-213ENST00000482878 THAP2Q9H0W7 228 aa13.33□□□□□ -0.28
CCDC78-213ENST00000482878 CNOT10Q9H9A5 744 aaKnown RBP13.33□□□□□ -0.28
CCDC78-213ENST00000482878 ZDHHC18Q9NUE0 388 aa13.33□□□□□ -0.28
CCDC78-213ENST00000482878 COG5Q9UP83 839 aa13.33□□□□□ -0.28
CCDC78-213ENST00000482878 SLC12A4Q9UP95 1085 aa13.33□□□□□ -0.28
CCDC78-213ENST00000482878 KRT16P08779 473 aa13.33□□□□□ -0.28
CCDC78-213ENST00000482878 TRIM49P0CI25 452 aa13.33□□□□□ -0.28
CCDC78-213ENST00000482878 TRIM49CP0CI26 452 aa13.33□□□□□ -0.28
CCDC78-213ENST00000482878 ZNF268Q14587 947 aaPredicted RBP13.33□□□□□ -0.28
CCDC78-213ENST00000482878 DUPD1Q68J44 220 aa13.33□□□□□ -0.28
CCDC78-213ENST00000482878 AADACL2Q6P093 401 aa13.33□□□□□ -0.28
CCDC78-213ENST00000482878 SPATA21Q7Z572 469 aa13.33□□□□□ -0.28
CCDC78-213ENST00000482878 ALG3Q92685 438 aa13.33□□□□□ -0.28
CCDC78-213ENST00000482878 CNKSR1Q969H4 720 aa13.33□□□□□ -0.28
CCDC78-213ENST00000482878 TLCD1Q96CP7 247 aa13.33□□□□□ -0.28
CCDC78-213ENST00000482878 CCDC17Q96LX7 622 aa13.33□□□□□ -0.28
CCDC78-213ENST00000482878 COA1Q9GZY4 146 aa13.33□□□□□ -0.28
CCDC78-213ENST00000482878 FAM13AO94988 1023 aa13.32□□□□□ -0.28
CCDC78-213ENST00000482878 TMEM154Q6P9G4 183 aa13.32□□□□□ -0.28
CCDC78-213ENST00000482878 PRMT1Q99873 361 aaKnown RBP13.32□□□□□ -0.28
CCDC78-213ENST00000482878 ERP44Q9BS26 406 aa13.32□□□□□ -0.28
CCDC78-213ENST00000482878 POLR3CQ9BUI4 534 aaPredicted RBP13.32□□□□□ -0.28
CCDC78-213ENST00000482878 TMOD4Q9NZQ9 345 aa13.32□□□□□ -0.28
CCDC78-213ENST00000482878 SUGT1Q9Y2Z0 365 aa13.32□□□□□ -0.28
CCDC78-213ENST00000482878 RAD17O75943 681 aa13.32□□□□□ -0.28
CCDC78-213ENST00000482878 PYGBP11216 843 aa13.32□□□□□ -0.28
CCDC78-213ENST00000482878 HOXA10P31260 410 aaPredicted RBP13.32□□□□□ -0.28
CCDC78-213ENST00000482878 RAB17Q9H0T7 212 aa13.32□□□□□ -0.28
CCDC78-213ENST00000482878 CARD9Q9H257 536 aa13.32□□□□□ -0.28
CCDC78-213ENST00000482878 SEPT11Q9NVA2 429 aaKnown RBP13.32□□□□□ -0.28
CCDC78-213ENST00000482878 FOCADQ5VW36 1801 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms