RNA–Protein interactions for RNA: ENST00000482217.1

VPS41-212, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 951 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-212ENST00000482217 CD40P25942 277 aa4.79□□□□□ -1.64
VPS41-212ENST00000482217 LSP1P33241 339 aa4.79□□□□□ -1.64
VPS41-212ENST00000482217 GALNSP34059 522 aa4.79□□□□□ -1.64
VPS41-212ENST00000482217 ALDH5A1P51649 535 aaPredicted RBP4.79□□□□□ -1.64
VPS41-212ENST00000482217 GJA9P57773 515 aa4.79□□□□□ -1.64
VPS41-212ENST00000482217 SMAD3P84022 425 aaKnown RBP4.79□□□□□ -1.64
VPS41-212ENST00000482217 MPP1Q00013 466 aa4.79□□□□□ -1.64
VPS41-212ENST00000482217 PFKPQ01813 784 aa4.79□□□□□ -1.64
VPS41-212ENST00000482217 ADCY1Q08828 1119 aa4.79□□□□□ -1.64
VPS41-212ENST00000482217 DBPQ10586 325 aaPredicted RBP4.79□□□□□ -1.64
VPS41-212ENST00000482217 G3BP1Q13283 466 aaKnown RBP eCLIP4.79□□□□□ -1.64
VPS41-212ENST00000482217 PPP2R5BQ15173 497 aa4.79□□□□□ -1.64
VPS41-212ENST00000482217 EPHA7Q15375 998 aa4.79□□□□□ -1.64
VPS41-212ENST00000482217 TERF2Q15554 542 aa4.79□□□□□ -1.64
VPS41-212ENST00000482217 SMAD2Q15796 467 aaKnown RBP4.79□□□□□ -1.64
VPS41-212ENST00000482217 PKN2Q16513 984 aaKnown RBP4.79□□□□□ -1.64
VPS41-212ENST00000482217 DDB1Q16531 1140 aa4.79□□□□□ -1.64
VPS41-212ENST00000482217 CR1LQ2VPA4 569 aa4.79□□□□□ -1.64
VPS41-212ENST00000482217 CATSPEREQ5SY80 951 aa4.79□□□□□ -1.64
VPS41-212ENST00000482217 CC2D1BQ5T0F9 858 aaKnown RBP4.79□□□□□ -1.64
VPS41-212ENST00000482217 ANKRD45Q5TZF3 282 aa4.79□□□□□ -1.64
VPS41-212ENST00000482217 IQSEC1Q6DN90 963 aa4.79□□□□□ -1.64
VPS41-212ENST00000482217 LCA5Q86VQ0 697 aa4.79□□□□□ -1.64
VPS41-212ENST00000482217 LDHDQ86WU2 507 aa4.79□□□□□ -1.64
VPS41-212ENST00000482217 C1QL4Q86Z23 238 aa4.79□□□□□ -1.64
VPS41-212ENST00000482217 SLC41A1Q8IVJ1 513 aa4.79□□□□□ -1.64
VPS41-212ENST00000482217 BRSK2Q8IWQ3 736 aa4.79□□□□□ -1.64
VPS41-212ENST00000482217 CNTD1Q8N815 330 aa4.79□□□□□ -1.64
VPS41-212ENST00000482217 ZNF610Q8N9Z0 462 aa4.79□□□□□ -1.64
VPS41-212ENST00000482217 VMP1Q96GC9 406 aa4.79□□□□□ -1.64
VPS41-212ENST00000482217 C16orf92Q96LL3 132 aa4.79□□□□□ -1.64
VPS41-212ENST00000482217 ZMAT2Q96NC0 199 aaKnown RBP4.79□□□□□ -1.64
VPS41-212ENST00000482217 MAP3K14Q99558 947 aa4.79□□□□□ -1.64
VPS41-212ENST00000482217 ABCG4Q9H172 646 aa4.79□□□□□ -1.64
VPS41-212ENST00000482217 BCAS3Q9H6U6 928 aa4.79□□□□□ -1.64
VPS41-212ENST00000482217 CNTD2Q9H8S5 307 aa4.79□□□□□ -1.64
VPS41-212ENST00000482217 KCNK12Q9HB15 430 aa4.79□□□□□ -1.64
VPS41-212ENST00000482217 KIAA1586Q9HCI6 787 aa4.79□□□□□ -1.64
VPS41-212ENST00000482217 GCM1Q9NP62 436 aa4.79□□□□□ -1.64
VPS41-212ENST00000482217 LUC7LQ9NQ29 371 aaKnown RBP4.79□□□□□ -1.64
VPS41-212ENST00000482217 DDX21Q9NR30 783 aaKnown RBP eCLIP4.79□□□□□ -1.64
VPS41-212ENST00000482217 TOMM22Q9NS69 142 aa4.79□□□□□ -1.64
VPS41-212ENST00000482217 ANKEF1Q9NU02 776 aa4.79□□□□□ -1.64
VPS41-212ENST00000482217 RRN3Q9NYV6 651 aa4.79□□□□□ -1.64
VPS41-212ENST00000482217 MBD1Q9UIS9 605 aaPredicted RBP4.79□□□□□ -1.64
VPS41-212ENST00000482217 AFG3L2Q9Y4W6 797 aa4.79□□□□□ -1.64
VPS41-212ENST00000482217 ASB1Q9Y576 335 aa4.79□□□□□ -1.64
VPS41-212ENST00000482217 PCDHA5Q9Y5H7 936 aa4.79□□□□□ -1.64
VPS41-212ENST00000482217 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.78□□□□□ -1.64
VPS41-212ENST00000482217 K7ESF4 209 aa4.78□□□□□ -1.64
VPS41-212ENST00000482217 EYA2O00167 538 aa4.78□□□□□ -1.64
VPS41-212ENST00000482217 N4BP3O15049 544 aa4.78□□□□□ -1.64
VPS41-212ENST00000482217 CYP2C8P10632 490 aa4.78□□□□□ -1.64
VPS41-212ENST00000482217 MTHFD1P11586 935 aaKnown RBP4.78□□□□□ -1.64
VPS41-212ENST00000482217 AOAHP28039 575 aa4.78□□□□□ -1.64
VPS41-212ENST00000482217 KRT20P35900 424 aa4.78□□□□□ -1.64
VPS41-212ENST00000482217 CDR1P51861 262 aa4.78□□□□□ -1.64
VPS41-212ENST00000482217 IFT88Q13099 833 aa4.78□□□□□ -1.64
VPS41-212ENST00000482217 ZNF385BQ569K4 471 aa4.78□□□□□ -1.64
VPS41-212ENST00000482217 BROXQ5VW32 411 aa4.78□□□□□ -1.64
VPS41-212ENST00000482217 CD276Q5ZPR3 534 aa4.78□□□□□ -1.64
VPS41-212ENST00000482217 SWSAP1Q6NVH7 229 aa4.78□□□□□ -1.64
VPS41-212ENST00000482217 CD300LDQ6UXZ3 194 aa4.78□□□□□ -1.64
VPS41-212ENST00000482217 TMEM151BQ8IW70 566 aa4.78□□□□□ -1.64
VPS41-212ENST00000482217 FAM186BQ8IYM0 893 aa4.78□□□□□ -1.64
VPS41-212ENST00000482217 ARL6IP6Q8N6S5 226 aa4.78□□□□□ -1.64
VPS41-212ENST00000482217 LSMEM1Q8N8F7 131 aa4.78□□□□□ -1.64
VPS41-212ENST00000482217 MZB1Q8WU39 189 aa4.78□□□□□ -1.64
VPS41-212ENST00000482217 ASB15Q8WXK1 588 aa4.78□□□□□ -1.64
VPS41-212ENST00000482217 BORCS6Q96GS4 357 aa4.78□□□□□ -1.64
VPS41-212ENST00000482217 SIGLEC10Q96LC7 697 aa4.78□□□□□ -1.64
VPS41-212ENST00000482217 TBATAQ96M53 351 aa4.78□□□□□ -1.64
VPS41-212ENST00000482217 LRGUKQ96M69 825 aa4.78□□□□□ -1.64
VPS41-212ENST00000482217 PPM1MQ96MI6 270 aa4.78□□□□□ -1.64
VPS41-212ENST00000482217 SPAG5Q96R06 1193 aa4.78□□□□□ -1.64
VPS41-212ENST00000482217 BARD1Q99728 777 aaKnown RBP4.78□□□□□ -1.64
VPS41-212ENST00000482217 MENTQ9BUN1 341 aa4.78□□□□□ -1.64
VPS41-212ENST00000482217 ZMAT4Q9H898 229 aa4.78□□□□□ -1.64
VPS41-212ENST00000482217 RSAD1Q9HA92 442 aa4.78□□□□□ -1.64
VPS41-212ENST00000482217 USP36Q9P275 1121 aaKnown RBP4.78□□□□□ -1.64
VPS41-212ENST00000482217 CNOT6Q9ULM6 557 aaKnown RBP4.78□□□□□ -1.64
VPS41-212ENST00000482217 PLA2G2DQ9UNK4 145 aa4.78□□□□□ -1.64
VPS41-212ENST00000482217 LUC7L2Q9Y383 392 aaKnown RBP4.78□□□□□ -1.64
VPS41-212ENST00000482217 SLC4A7Q9Y6M7 1214 aa4.78□□□□□ -1.64
VPS41-212ENST00000482217 A0A1B0GVC2 190 aa4.77□□□□□ -1.65
VPS41-212ENST00000482217 ERICH4A6NGS2 130 aa4.77□□□□□ -1.65
VPS41-212ENST00000482217 A6NNZ2 444 aa4.77□□□□□ -1.65
VPS41-212ENST00000482217 GOLGA6L22H0YM25 854 aa4.77□□□□□ -1.65
VPS41-212ENST00000482217 M0R3H8 397 aa4.77□□□□□ -1.65
VPS41-212ENST00000482217 IPO8O15397 1037 aaKnown RBP4.77□□□□□ -1.65
VPS41-212ENST00000482217 NUAK1O60285 661 aa4.77□□□□□ -1.65
VPS41-212ENST00000482217 TIPRLO75663 272 aa4.77□□□□□ -1.65
VPS41-212ENST00000482217 C8BP07358 591 aa4.77□□□□□ -1.65
VPS41-212ENST00000482217 MMEP08473 750 aa4.77□□□□□ -1.65
VPS41-212ENST00000482217 ZSCAN22P10073 491 aaPredicted RBP4.77□□□□□ -1.65
VPS41-212ENST00000482217 PF4V1P10720 104 aa4.77□□□□□ -1.65
VPS41-212ENST00000482217 IDEP14735 1019 aa4.77□□□□□ -1.65
VPS41-212ENST00000482217 LPOP22079 712 aaPredicted RBP4.77□□□□□ -1.65
VPS41-212ENST00000482217 IGFBP6P24592 240 aaPredicted RBP4.77□□□□□ -1.65
VPS41-212ENST00000482217 PTX3P26022 381 aaPredicted RBP4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms