RNA–Protein interactions for RNA: ENST00000481109.5

PRPF4B-206, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 2,364 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-206ENST00000481109 RIN3Q8TB24 985 aa11.04□□□□□ -0.64
PRPF4B-206ENST00000481109 OSCP1Q8WVF1 389 aa11.04□□□□□ -0.64
PRPF4B-206ENST00000481109 SGCDQ92629 289 aa11.04□□□□□ -0.64
PRPF4B-206ENST00000481109 CDKL2Q92772 493 aa11.04□□□□□ -0.64
PRPF4B-206ENST00000481109 SLC7A6OSQ96CW6 309 aaPredicted RBP11.04□□□□□ -0.64
PRPF4B-206ENST00000481109 FNBP1Q96RU3 617 aa11.04□□□□□ -0.64
PRPF4B-206ENST00000481109 SENP7Q9BQF6 1050 aa11.04□□□□□ -0.64
PRPF4B-206ENST00000481109 GPATCH1Q9BRR8 931 aaKnown RBP11.04□□□□□ -0.64
PRPF4B-206ENST00000481109 STMN4Q9H169 189 aaPredicted RBP11.04□□□□□ -0.64
PRPF4B-206ENST00000481109 TBC1D23Q9NUY8 699 aa11.04□□□□□ -0.64
PRPF4B-206ENST00000481109 ARMC1Q9NVT9 282 aa11.04□□□□□ -0.64
PRPF4B-206ENST00000481109 MTRF1LQ9UGC7 380 aaKnown RBP11.04□□□□□ -0.64
PRPF4B-206ENST00000481109 ZRANB1Q9UGI0 708 aa11.04□□□□□ -0.64
PRPF4B-206ENST00000481109 DIP2CQ9Y2E4 1556 aa11.04□□□□□ -0.64
PRPF4B-206ENST00000481109 MAP3K19Q56UN5 1328 aa11.04□□□□□ -0.64
PRPF4B-206ENST00000481109 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.04□□□□□ -0.64
PRPF4B-206ENST00000481109 ZSCAN5CA6NGD5 496 aaPredicted RBP11.04□□□□□ -0.64
PRPF4B-206ENST00000481109 TMCC2O75069 709 aa11.04□□□□□ -0.64
PRPF4B-206ENST00000481109 NUDT17P0C025 328 aa11.04□□□□□ -0.64
PRPF4B-206ENST00000481109 OCM2P0CE71 109 aa11.04□□□□□ -0.64
PRPF4B-206ENST00000481109 OCMP0CE72 109 aaPredicted RBP11.04□□□□□ -0.64
PRPF4B-206ENST00000481109 IL32P24001 234 aa11.04□□□□□ -0.64
PRPF4B-206ENST00000481109 ATP5DP30049 168 aa11.04□□□□□ -0.64
PRPF4B-206ENST00000481109 NEK3P51956 506 aa11.04□□□□□ -0.64
PRPF4B-206ENST00000481109 HNRNPFP52597 415 aaKnown RBP11.04□□□□□ -0.64
PRPF4B-206ENST00000481109 DSTNP60981 165 aa11.04□□□□□ -0.64
PRPF4B-206ENST00000481109 IKQ13123 557 aaPredicted RBP11.04□□□□□ -0.64
PRPF4B-206ENST00000481109 PPP2R5BQ15173 497 aa11.04□□□□□ -0.64
PRPF4B-206ENST00000481109 CERKLQ49MI3 558 aaPredicted RBP11.04□□□□□ -0.64
PRPF4B-206ENST00000481109 SLC30A10Q6XR72 485 aa11.04□□□□□ -0.64
PRPF4B-206ENST00000481109 DCDC5Q6ZRR9 648 aa11.04□□□□□ -0.64
PRPF4B-206ENST00000481109 COL23A1Q86Y22 540 aaPredicted RBP11.04□□□□□ -0.64
PRPF4B-206ENST00000481109 ERI1Q8IV48 349 aaKnown RBP11.04□□□□□ -0.64
PRPF4B-206ENST00000481109 TRMT44Q8IYL2 757 aaKnown RBP11.04□□□□□ -0.64
PRPF4B-206ENST00000481109 HACE1Q8IYU2 909 aa11.04□□□□□ -0.64
PRPF4B-206ENST00000481109 LILRB2Q8N423 598 aa11.04□□□□□ -0.64
PRPF4B-206ENST00000481109 ENAHQ8N8S7 591 aaPredicted RBP11.04□□□□□ -0.64
PRPF4B-206ENST00000481109 PRPF31Q8WWY3 499 aaKnown RBP11.04□□□□□ -0.64
PRPF4B-206ENST00000481109 GIMAP5Q96F15 307 aa11.04□□□□□ -0.64
PRPF4B-206ENST00000481109 MAP3K14Q99558 947 aa11.04□□□□□ -0.64
PRPF4B-206ENST00000481109 TTC1Q99614 292 aa11.04□□□□□ -0.64
PRPF4B-206ENST00000481109 ANKRD2Q9GZV1 360 aa11.04□□□□□ -0.64
PRPF4B-206ENST00000481109 GPBP1L1Q9HC44 474 aaPredicted RBP11.04□□□□□ -0.64
PRPF4B-206ENST00000481109 NDFIP2Q9NV92 336 aa11.04□□□□□ -0.64
PRPF4B-206ENST00000481109 FBXL5Q9UKA1 691 aa11.04□□□□□ -0.64
PRPF4B-206ENST00000481109 ARHGEF10O15013 1369 aa11.04□□□□□ -0.64
PRPF4B-206ENST00000481109 SMIM23A6NLE4 172 aa11.03□□□□□ -0.64
PRPF4B-206ENST00000481109 GOLGA8BA8MQT2 603 aa11.03□□□□□ -0.64
PRPF4B-206ENST00000481109 ELL2O00472 640 aaPredicted RBP11.03□□□□□ -0.64
PRPF4B-206ENST00000481109 RGS13O14921 159 aa11.03□□□□□ -0.64
PRPF4B-206ENST00000481109 CTDNEP1O95476 244 aa11.03□□□□□ -0.64
PRPF4B-206ENST00000481109 CHEK2O96017 543 aa11.03□□□□□ -0.64
PRPF4B-206ENST00000481109 PTPN4P29074 926 aa11.03□□□□□ -0.64
PRPF4B-206ENST00000481109 PHKA2P46019 1235 aa11.03□□□□□ -0.64
PRPF4B-206ENST00000481109 TNNI2P48788 182 aa11.03□□□□□ -0.64
PRPF4B-206ENST00000481109 YARSP54577 528 aaKnown RBP11.03□□□□□ -0.64
PRPF4B-206ENST00000481109 SF3B3Q15393 1217 aaKnown RBP11.03□□□□□ -0.64
PRPF4B-206ENST00000481109 INTS8Q75QN2 995 aaKnown RBP11.03□□□□□ -0.64
PRPF4B-206ENST00000481109 CADM3Q8N126 398 aa11.03□□□□□ -0.64
PRPF4B-206ENST00000481109 UBLCP1Q8WVY7 318 aaPredicted RBP11.03□□□□□ -0.64
PRPF4B-206ENST00000481109 FBXL18Q96ME1 805 aa11.03□□□□□ -0.64
PRPF4B-206ENST00000481109 SELENOSQ9BQE4 189 aa11.03□□□□□ -0.64
PRPF4B-206ENST00000481109 IMPG2Q9BZV3 1241 aa11.03□□□□□ -0.64
PRPF4B-206ENST00000481109 MTFR1LQ9H019 292 aa11.03□□□□□ -0.64
PRPF4B-206ENST00000481109 PVALEFA0A1B0GWK0 134 aa11.03□□□□□ -0.64
PRPF4B-206ENST00000481109 RCCD1A6NED2 376 aa11.03□□□□□ -0.64
PRPF4B-206ENST00000481109 CCDC169A6NNP5 214 aa11.03□□□□□ -0.64
PRPF4B-206ENST00000481109 A8MXQ7 604 aa11.03□□□□□ -0.64
PRPF4B-206ENST00000481109 RNF225M0QZC1 329 aaPredicted RBP11.03□□□□□ -0.64
PRPF4B-206ENST00000481109 DKC1O60832 514 aaKnown RBP eCLIP11.03□□□□□ -0.64
PRPF4B-206ENST00000481109 KRT75O95678 551 aa11.03□□□□□ -0.64
PRPF4B-206ENST00000481109 KRT6AP02538 564 aa11.03□□□□□ -0.64
PRPF4B-206ENST00000481109 KRT6BP04259 564 aa11.03□□□□□ -0.64
PRPF4B-206ENST00000481109 S100BP04271 92 aaPredicted RBP11.03□□□□□ -0.64
PRPF4B-206ENST00000481109 XIAPP98170 497 aa11.03□□□□□ -0.64
PRPF4B-206ENST00000481109 IRF5Q13568 498 aa11.03□□□□□ -0.64
PRPF4B-206ENST00000481109 CNGA2Q16280 664 aa11.03□□□□□ -0.64
PRPF4B-206ENST00000481109 BBS9Q3SYG4 887 aa11.03□□□□□ -0.64
PRPF4B-206ENST00000481109 RWDD4Q6NW29 188 aaKnown RBP11.03□□□□□ -0.64
PRPF4B-206ENST00000481109 NFRKBQ6P4R8 1299 aa11.03□□□□□ -0.64
PRPF4B-206ENST00000481109 SHC4Q6S5L8 630 aa11.03□□□□□ -0.64
PRPF4B-206ENST00000481109 TMC3Q7Z5M5 1100 aa11.03□□□□□ -0.64
PRPF4B-206ENST00000481109 EXD1Q8NHP7 514 aa11.03□□□□□ -0.64
PRPF4B-206ENST00000481109 GSDMBQ8TAX9 411 aa11.03□□□□□ -0.64
PRPF4B-206ENST00000481109 SPATA20Q8TB22 786 aa11.03□□□□□ -0.64
PRPF4B-206ENST00000481109 DDX54Q8TDD1 881 aaKnown RBP11.03□□□□□ -0.64
PRPF4B-206ENST00000481109 AIFM3Q96NN9 605 aa11.03□□□□□ -0.64
PRPF4B-206ENST00000481109 DHRS9Q9BPW9 319 aa11.03□□□□□ -0.64
PRPF4B-206ENST00000481109 SH2D4AQ9H788 454 aa11.03□□□□□ -0.64
PRPF4B-206ENST00000481109 SYCE1LA8MT33 242 aa11.02□□□□□ -0.65
PRPF4B-206ENST00000481109 SH2B2O14492 632 aaPredicted RBP11.02□□□□□ -0.65
PRPF4B-206ENST00000481109 AQP9O43315 295 aa11.02□□□□□ -0.65
PRPF4B-206ENST00000481109 EPHB2P29323 1055 aa11.02□□□□□ -0.65
PRPF4B-206ENST00000481109 CHRNEQ04844 493 aa11.02□□□□□ -0.65
PRPF4B-206ENST00000481109 GALNT1Q10472 559 aaPredicted RBP11.02□□□□□ -0.65
PRPF4B-206ENST00000481109 KCNJ8Q15842 424 aa11.02□□□□□ -0.65
PRPF4B-206ENST00000481109 DGLUCYQ7Z3D6 616 aa11.02□□□□□ -0.65
PRPF4B-206ENST00000481109 TMC7Q7Z402 723 aa11.02□□□□□ -0.65
PRPF4B-206ENST00000481109 CHPT1Q8WUD6 406 aa11.02□□□□□ -0.65
PRPF4B-206ENST00000481109 CDHR1Q96JP9 859 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms