RNA–Protein interactions for RNA: ENST00000480961.1

CTSA-206, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 513 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-206ENST00000480961 AMPD3Q01432 767 aa22.38■■□□□ 1.17
CTSA-206ENST00000480961 CUL4BQ13620 913 aa22.38■■□□□ 1.17
CTSA-206ENST00000480961 GRIN2CQ14957 1233 aa22.38■■□□□ 1.17
CTSA-206ENST00000480961 ZC2HC1CQ53FD0 456 aaPredicted RBP22.38■■□□□ 1.17
CTSA-206ENST00000480961 HERC4Q5GLZ8 1057 aaPredicted RBP22.38■■□□□ 1.17
CTSA-206ENST00000480961 ATF7IP2Q5U623 682 aa22.38■■□□□ 1.17
CTSA-206ENST00000480961 GPR153Q6NV75 609 aa22.38■■□□□ 1.17
CTSA-206ENST00000480961 SLC27A1Q6PCB7 646 aa22.38■■□□□ 1.17
CTSA-206ENST00000480961 FIBCD1Q8N539 461 aa22.38■■□□□ 1.17
CTSA-206ENST00000480961 ARNTL2Q8WYA1 636 aa22.38■■□□□ 1.17
CTSA-206ENST00000480961 CCDC51Q96ER9 411 aa22.38■■□□□ 1.17
CTSA-206ENST00000480961 PAGE5Q96GU1 130 aa22.38■■□□□ 1.17
CTSA-206ENST00000480961 PYM1Q9BRP8 204 aaKnown RBP22.38■■□□□ 1.17
CTSA-206ENST00000480961 C17orf80Q9BSJ5 609 aa22.38■■□□□ 1.17
CTSA-206ENST00000480961 TRIM6Q9C030 488 aaPredicted RBP22.38■■□□□ 1.17
CTSA-206ENST00000480961 LRRC27Q9C0I9 530 aa22.38■■□□□ 1.17
CTSA-206ENST00000480961 NXF3Q9H4D5 531 aaKnown RBP22.38■■□□□ 1.17
CTSA-206ENST00000480961 RNF216Q9NWF9 866 aaPredicted RBP22.38■■□□□ 1.17
CTSA-206ENST00000480961 KCNG1Q9UIX4 513 aa22.38■■□□□ 1.17
CTSA-206ENST00000480961 IPPQ9Y573 584 aa22.38■■□□□ 1.17
CTSA-206ENST00000480961 MRPL42Q9Y6G3 142 aaKnown RBP22.38■■□□□ 1.17
CTSA-206ENST00000480961 RFXAPO00287 272 aa22.37■■□□□ 1.17
CTSA-206ENST00000480961 N4BP3O15049 544 aa22.37■■□□□ 1.17
CTSA-206ENST00000480961 ZNF623O75123 536 aa22.37■■□□□ 1.17
CTSA-206ENST00000480961 SKIP12755 728 aa22.37■■□□□ 1.17
CTSA-206ENST00000480961 RAB27AP51159 221 aa22.37■■□□□ 1.17
CTSA-206ENST00000480961 STRN3Q13033 797 aa22.37■■□□□ 1.17
CTSA-206ENST00000480961 MRPL10Q7Z7H8 261 aaKnown RBP22.37■■□□□ 1.17
CTSA-206ENST00000480961 ZBTB33Q86T24 672 aa22.37■■□□□ 1.17
CTSA-206ENST00000480961 CASD1Q96PB1 797 aa22.37■■□□□ 1.17
CTSA-206ENST00000480961 ACO2Q99798 780 aaKnown RBP22.37■■□□□ 1.17
CTSA-206ENST00000480961 C7orf25Q9BPX7 421 aa22.37■■□□□ 1.17
CTSA-206ENST00000480961 MRPL4Q9BYD3 311 aaKnown RBP22.37■■□□□ 1.17
CTSA-206ENST00000480961 INPP5FQ9Y2H2 1132 aa22.37■■□□□ 1.17
CTSA-206ENST00000480961 CDH23Q9H251 3354 aa22.36■■□□□ 1.17
CTSA-206ENST00000480961 EPOPA6NHQ4 379 aa22.36■■□□□ 1.17
CTSA-206ENST00000480961 ITGA4P13612 1032 aa22.36■■□□□ 1.17
CTSA-206ENST00000480961 GAP43P17677 238 aa22.36■■□□□ 1.17
CTSA-206ENST00000480961 AKAP5P24588 427 aa22.36■■□□□ 1.17
CTSA-206ENST00000480961 AGMOQ6ZNB7 445 aa22.36■■□□□ 1.17
CTSA-206ENST00000480961 CCDC65Q8IXS2 484 aa22.36■■□□□ 1.17
CTSA-206ENST00000480961 ABI1Q8IZP0 508 aa22.36■■□□□ 1.17
CTSA-206ENST00000480961 PGBD4Q96DM1 585 aa22.36■■□□□ 1.17
CTSA-206ENST00000480961 ZBTB45Q96K62 511 aaPredicted RBP22.36■■□□□ 1.17
CTSA-206ENST00000480961 FGFBP2Q9BYJ0 223 aa22.36■■□□□ 1.17
CTSA-206ENST00000480961 PRDM12Q9H4Q4 367 aa22.36■■□□□ 1.17
CTSA-206ENST00000480961 MRPL44Q9H9J2 332 aaKnown RBP22.36■■□□□ 1.17
CTSA-206ENST00000480961 MAGEF1Q9HAY2 307 aa22.36■■□□□ 1.17
CTSA-206ENST00000480961 TBX20Q9UMR3 447 aa22.36■■□□□ 1.17
CTSA-206ENST00000480961 TTC3P53804 2025 aa22.36■■□□□ 1.17
CTSA-206ENST00000480961 FRMD3A2A2Y4 597 aa22.35■■□□□ 1.17
CTSA-206ENST00000480961 ZNF202O95125 648 aa22.35■■□□□ 1.17
CTSA-206ENST00000480961 AFF1P51825 1210 aaKnown RBP22.35■■□□□ 1.17
CTSA-206ENST00000480961 COASYQ13057 564 aa22.35■■□□□ 1.17
CTSA-206ENST00000480961 LRRC55Q6ZSA7 311 aa22.35■■□□□ 1.17
CTSA-206ENST00000480961 ZNF720Q7Z2F6 126 aa22.35■■□□□ 1.17
CTSA-206ENST00000480961 CMTR2Q8IYT2 770 aaKnown RBP22.35■■□□□ 1.17
CTSA-206ENST00000480961 TGS1Q96RS0 853 aaKnown RBP22.35■■□□□ 1.17
CTSA-206ENST00000480961 TCHPQ9BT92 498 aa22.35■■□□□ 1.17
CTSA-206ENST00000480961 TMEM117Q9H0C3 514 aa22.35■■□□□ 1.17
CTSA-206ENST00000480961 IKZF4Q9H2S9 585 aa22.35■■□□□ 1.17
CTSA-206ENST00000480961 TYW1Q9NV66 732 aaKnown RBP22.35■■□□□ 1.17
CTSA-206ENST00000480961 TMEM265A0A087WTH1 108 aa22.34■■□□□ 1.17
CTSA-206ENST00000480961 H0YCG3 227 aa22.34■■□□□ 1.17
CTSA-206ENST00000480961 HOXA2O43364 376 aa22.34■■□□□ 1.17
CTSA-206ENST00000480961 OFD1O75665 1012 aa22.34■■□□□ 1.17
CTSA-206ENST00000480961 MYBP10242 640 aa22.34■■□□□ 1.17
CTSA-206ENST00000480961 HARSP12081 509 aaKnown RBP22.34■■□□□ 1.17
CTSA-206ENST00000480961 CASP5P51878 434 aa22.34■■□□□ 1.17
CTSA-206ENST00000480961 GLB1LQ6UWU2 654 aa22.34■■□□□ 1.17
CTSA-206ENST00000480961 CNNM3Q8NE01 707 aa22.34■■□□□ 1.17
CTSA-206ENST00000480961 GLIS3Q8NEA6 775 aa22.34■■□□□ 1.17
CTSA-206ENST00000480961 BICD1Q96G01 975 aa22.34■■□□□ 1.17
CTSA-206ENST00000480961 MTMR10Q9NXD2 777 aa22.34■■□□□ 1.17
CTSA-206ENST00000480961 SNTG2Q9NY99 539 aa22.34■■□□□ 1.17
CTSA-206ENST00000480961 KLK14Q9P0G3 267 aa22.34■■□□□ 1.17
CTSA-206ENST00000480961 PARP2Q9UGN5 583 aa22.34■■□□□ 1.17
CTSA-206ENST00000480961 USP25Q9UHP3 1055 aa22.34■■□□□ 1.17
CTSA-206ENST00000480961 TNFSF13BQ9Y275 285 aa22.34■■□□□ 1.17
CTSA-206ENST00000480961 GCNT3O95395 438 aa22.33■■□□□ 1.17
CTSA-206ENST00000480961 LINC00271P0C7V0 271 aa22.33■■□□□ 1.17
CTSA-206ENST00000480961 PRR29P0C7W0 189 aa22.33■■□□□ 1.17
CTSA-206ENST00000480961 ERVK-21P61565 698 aa22.33■■□□□ 1.17
CTSA-206ENST00000480961 GTF2BQ00403 316 aa22.33■■□□□ 1.17
CTSA-206ENST00000480961 CSPP1Q1MSJ5 1256 aa22.33■■□□□ 1.17
CTSA-206ENST00000480961 SPOUT1Q5T280 376 aaKnown RBP22.33■■□□□ 1.17
CTSA-206ENST00000480961 KRBA2Q6ZNG9 492 aa22.33■■□□□ 1.17
CTSA-206ENST00000480961 FMR1NBQ8N0W7 255 aaPredicted RBP22.33■■□□□ 1.17
CTSA-206ENST00000480961 GUCD1Q96NT3 240 aa22.33■■□□□ 1.17
CTSA-206ENST00000480961 CDX2Q99626 313 aaPredicted RBP22.33■■□□□ 1.17
CTSA-206ENST00000480961 ADPGKQ9BRR6 497 aa22.33■■□□□ 1.17
CTSA-206ENST00000480961 RSAD1Q9HA92 442 aa22.33■■□□□ 1.17
CTSA-206ENST00000480961 PTPRHQ9HD43 1115 aa22.33■■□□□ 1.17
CTSA-206ENST00000480961 ANKFY1Q9P2R3 1169 aa22.33■■□□□ 1.17
CTSA-206ENST00000480961 SEL1LQ9UBV2 794 aa22.33■■□□□ 1.17
CTSA-206ENST00000480961 COL4A6Q14031 1691 aa22.33■■□□□ 1.16
CTSA-206ENST00000480961 CTNNB1P35222 781 aa22.32■■□□□ 1.16
CTSA-206ENST00000480961 OSTNP61366 133 aa22.32■■□□□ 1.16
CTSA-206ENST00000480961 KCNA1Q09470 495 aa22.32■■□□□ 1.16
CTSA-206ENST00000480961 ZNF568Q3ZCX4 644 aa22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms