RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 UBN1Q9NPG3 1134 aa16.94■□□□□ 0.3
LIMS3-203ENST00000480744 PRG3Q9Y2Y8 225 aaPredicted RBP16.94■□□□□ 0.3
LIMS3-203ENST00000480744 NR2E1Q9Y466 385 aa16.94■□□□□ 0.3
LIMS3-203ENST00000480744 HES2Q9Y543 173 aa16.94■□□□□ 0.3
LIMS3-203ENST00000480744 IRAK3Q9Y616 596 aa16.94■□□□□ 0.3
LIMS3-203ENST00000480744 C2orf16Q68DN1 1984 aa16.94■□□□□ 0.3
LIMS3-203ENST00000480744 PLXNA3P51805 1871 aa16.94■□□□□ 0.3
LIMS3-203ENST00000480744 KMT2EQ8IZD2 1858 aa16.93■□□□□ 0.3
LIMS3-203ENST00000480744 NRP1O14786 923 aa16.93■□□□□ 0.3
LIMS3-203ENST00000480744 GLRA2P23416 452 aa16.93■□□□□ 0.3
LIMS3-203ENST00000480744 ARL2P36404 184 aa16.93■□□□□ 0.3
LIMS3-203ENST00000480744 MLH1P40692 756 aa16.93■□□□□ 0.3
LIMS3-203ENST00000480744 MTHFRP42898 656 aa16.93■□□□□ 0.3
LIMS3-203ENST00000480744 OR1G1P47890 313 aa16.93■□□□□ 0.3
LIMS3-203ENST00000480744 PCBP1Q15365 356 aaKnown RBP eCLIP16.93■□□□□ 0.3
LIMS3-203ENST00000480744 PTPN21Q16825 1174 aa16.93■□□□□ 0.3
LIMS3-203ENST00000480744 CABP7Q86V35 215 aa16.93■□□□□ 0.3
LIMS3-203ENST00000480744 SUGP1Q8IWZ8 645 aaKnown RBP16.93■□□□□ 0.3
LIMS3-203ENST00000480744 SLC22A17Q8WUG5 538 aa16.93■□□□□ 0.3
LIMS3-203ENST00000480744 FBXL18Q96ME1 805 aa16.93■□□□□ 0.3
LIMS3-203ENST00000480744 GAD1Q99259 594 aa16.93■□□□□ 0.3
LIMS3-203ENST00000480744 EMILIN2Q9BXX0 1053 aa16.93■□□□□ 0.3
LIMS3-203ENST00000480744 CSRNP2Q9H175 543 aa16.93■□□□□ 0.3
LIMS3-203ENST00000480744 RNF39Q9H2S5 420 aa16.93■□□□□ 0.3
LIMS3-203ENST00000480744 LIMCH1Q9UPQ0 1083 aa16.93■□□□□ 0.3
LIMS3-203ENST00000480744 DENND4AQ7Z401 1863 aa16.93■□□□□ 0.3
LIMS3-203ENST00000480744 ARL5CA6NH57 179 aa16.92■□□□□ 0.3
LIMS3-203ENST00000480744 LRRIQ4A6NIV6 560 aa16.92■□□□□ 0.3
LIMS3-203ENST00000480744 C2CD4DB7Z1M9 353 aa16.92■□□□□ 0.3
LIMS3-203ENST00000480744 C2CD2LO14523 706 aa16.92■□□□□ 0.3
LIMS3-203ENST00000480744 B4GALT5O43286 388 aa16.92■□□□□ 0.3
LIMS3-203ENST00000480744 ARF4P18085 180 aaPredicted RBP16.92■□□□□ 0.3
LIMS3-203ENST00000480744 KLRC2P26717 231 aa16.92■□□□□ 0.3
LIMS3-203ENST00000480744 SCNN1GP51170 649 aa16.92■□□□□ 0.3
LIMS3-203ENST00000480744 POU5F1BQ06416 359 aa16.92■□□□□ 0.3
LIMS3-203ENST00000480744 SIGLEC14Q08ET2 396 aa16.92■□□□□ 0.3
LIMS3-203ENST00000480744 GNL2Q13823 731 aaKnown RBP16.92■□□□□ 0.3
LIMS3-203ENST00000480744 ZNF174Q15697 407 aa16.92■□□□□ 0.3
LIMS3-203ENST00000480744 TMC5Q6UXY8 1006 aa16.92■□□□□ 0.3
LIMS3-203ENST00000480744 PPFIBP1Q86W92 1011 aa16.92■□□□□ 0.3
LIMS3-203ENST00000480744 CDR2LQ86X02 465 aaPredicted RBP16.92■□□□□ 0.3
LIMS3-203ENST00000480744 IFNLR1Q8IU57 520 aaPredicted RBP16.92■□□□□ 0.3
LIMS3-203ENST00000480744 HACE1Q8IYU2 909 aa16.92■□□□□ 0.3
LIMS3-203ENST00000480744 ZFP42Q96MM3 310 aa16.92■□□□□ 0.3
LIMS3-203ENST00000480744 NXF3Q9H4D5 531 aaKnown RBP16.92■□□□□ 0.3
LIMS3-203ENST00000480744 GPRC5CQ9NQ84 441 aa16.92■□□□□ 0.3
LIMS3-203ENST00000480744 STK39Q9UEW8 545 aa16.92■□□□□ 0.3
LIMS3-203ENST00000480744 DBR1Q9UK59 544 aaKnown RBP16.92■□□□□ 0.3
LIMS3-203ENST00000480744 MED24O75448 989 aa16.91■□□□□ 0.3
LIMS3-203ENST00000480744 NPTXRO95502 500 aa16.91■□□□□ 0.3
LIMS3-203ENST00000480744 URODP06132 367 aa16.91■□□□□ 0.3
LIMS3-203ENST00000480744 SPATA31C1P0DKV0 1188 aa16.91■□□□□ 0.3
LIMS3-203ENST00000480744 AMHR2Q16671 573 aa16.91■□□□□ 0.3
LIMS3-203ENST00000480744 ATAT1Q5SQI0 421 aa16.91■□□□□ 0.3
LIMS3-203ENST00000480744 KIAA1841Q6NSI8 718 aa16.91■□□□□ 0.3
LIMS3-203ENST00000480744 BMP8AQ7Z5Y6 402 aa16.91■□□□□ 0.3
LIMS3-203ENST00000480744 CATSPER3Q86XQ3 398 aa16.91■□□□□ 0.3
LIMS3-203ENST00000480744 COLGALT2Q8IYK4 626 aa16.91■□□□□ 0.3
LIMS3-203ENST00000480744 ERMNQ8TAM6 284 aa16.91■□□□□ 0.3
LIMS3-203ENST00000480744 KLHL5Q96PQ7 755 aa16.91■□□□□ 0.3
LIMS3-203ENST00000480744 KCNH6Q9H252 994 aa16.91■□□□□ 0.3
LIMS3-203ENST00000480744 TUFT1Q9NNX1 390 aa16.91■□□□□ 0.3
LIMS3-203ENST00000480744 MRPL17Q9NRX2 175 aaKnown RBP16.91■□□□□ 0.3
LIMS3-203ENST00000480744 NR1I2O75469 434 aa16.9■□□□□ 0.3
LIMS3-203ENST00000480744 SOD2P04179 222 aa16.9■□□□□ 0.3
LIMS3-203ENST00000480744 CNPP09543 421 aaKnown RBP16.9■□□□□ 0.3
LIMS3-203ENST00000480744 OR52Z1P0C646 297 aa16.9■□□□□ 0.3
LIMS3-203ENST00000480744 XRCC6P12956 609 aaKnown RBP eCLIP16.9■□□□□ 0.3
LIMS3-203ENST00000480744 AKAP5P24588 427 aa16.9■□□□□ 0.3
LIMS3-203ENST00000480744 SLC27A1Q6PCB7 646 aa16.9■□□□□ 0.3
LIMS3-203ENST00000480744 POTEGQ6S5H5 508 aa16.9■□□□□ 0.3
LIMS3-203ENST00000480744 ALYREFQ86V81 257 aaKnown RBP16.9■□□□□ 0.3
LIMS3-203ENST00000480744 FBXL6Q8N531 539 aa16.9■□□□□ 0.3
LIMS3-203ENST00000480744 TDRD5Q8NAT2 981 aaKnown RBP16.9■□□□□ 0.3
LIMS3-203ENST00000480744 KREMEN2Q8NCW0 462 aa16.9■□□□□ 0.3
LIMS3-203ENST00000480744 NACC1Q96RE7 527 aa16.9■□□□□ 0.3
LIMS3-203ENST00000480744 LLPHQ9BRT6 129 aaKnown RBP16.9■□□□□ 0.3
LIMS3-203ENST00000480744 HERC2P3Q9BVR0 1158 aa16.9■□□□□ 0.3
LIMS3-203ENST00000480744 NFKBIZQ9BYH8 718 aa16.9■□□□□ 0.3
LIMS3-203ENST00000480744 SFXN1Q9H9B4 322 aa16.9■□□□□ 0.3
LIMS3-203ENST00000480744 MARCH5Q9NX47 278 aa16.9■□□□□ 0.3
LIMS3-203ENST00000480744 MIOSQ9NXC5 875 aa16.9■□□□□ 0.3
LIMS3-203ENST00000480744 PARP2Q9UGN5 583 aa16.9■□□□□ 0.3
LIMS3-203ENST00000480744 ZDBF2Q9HCK1 2354 aa16.89■□□□□ 0.3
LIMS3-203ENST00000480744 NHLH1Q02575 133 aa16.89■□□□□ 0.29
LIMS3-203ENST00000480744 TMEM132AQ24JP5 1023 aa16.89■□□□□ 0.29
LIMS3-203ENST00000480744 TTC38Q5R3I4 469 aa16.89■□□□□ 0.29
LIMS3-203ENST00000480744 TAS1R1Q7RTX1 841 aa16.89■□□□□ 0.29
LIMS3-203ENST00000480744 ZBTB8OSQ8IWT0 167 aa16.89■□□□□ 0.29
LIMS3-203ENST00000480744 FAM184AQ8NB25 1140 aa16.89■□□□□ 0.29
LIMS3-203ENST00000480744 MCPH1Q8NEM0 835 aa16.89■□□□□ 0.29
LIMS3-203ENST00000480744 FEZF2Q8TBJ5 459 aa16.89■□□□□ 0.29
LIMS3-203ENST00000480744 POLR3CQ9BUI4 534 aaPredicted RBP16.89■□□□□ 0.29
LIMS3-203ENST00000480744 FOXP1Q9H334 677 aaPredicted RBP16.89■□□□□ 0.29
LIMS3-203ENST00000480744 KLK14Q9P0G3 267 aa16.89■□□□□ 0.29
LIMS3-203ENST00000480744 GIT1Q9Y2X7 761 aa16.89■□□□□ 0.29
LIMS3-203ENST00000480744 MTCL1Q9Y4B5 1905 aaKnown RBP16.89■□□□□ 0.29
LIMS3-203ENST00000480744 ARHGEF35A5YM69 484 aa16.88■□□□□ 0.29
LIMS3-203ENST00000480744 F8W810 466 aa16.88■□□□□ 0.29
LIMS3-203ENST00000480744 INPPL1O15357 1258 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms