RNA–Protein interactions for RNA: ENST00000480638.1

CALD1-219, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 560 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-219ENST00000480638 LILRA3Q8N6C8 439 aaPredicted RBP7.02□□□□□ -1.29
CALD1-219ENST00000480638 OR5M3Q8NGP4 307 aa7.02□□□□□ -1.29
CALD1-219ENST00000480638 ZNF480Q8WV37 535 aa7.02□□□□□ -1.29
CALD1-219ENST00000480638 RIN2Q8WYP3 895 aaPredicted RBP7.02□□□□□ -1.29
CALD1-219ENST00000480638 FAM89AQ96GI7 184 aa7.02□□□□□ -1.29
CALD1-219ENST00000480638 CDK5RAP1Q96SZ6 601 aaKnown RBP7.02□□□□□ -1.29
CALD1-219ENST00000480638 RPTORQ8N122 1335 aa7.01□□□□□ -1.29
CALD1-219ENST00000480638 CAPN14A8MX76 684 aa7.01□□□□□ -1.29
CALD1-219ENST00000480638 STC2O76061 302 aa7.01□□□□□ -1.29
CALD1-219ENST00000480638 MALLQ13021 153 aa7.01□□□□□ -1.29
CALD1-219ENST00000480638 CLUL1Q15846 466 aa7.01□□□□□ -1.29
CALD1-219ENST00000480638 MST1LQ2TV78 715 aa7.01□□□□□ -1.29
CALD1-219ENST00000480638 BRDTQ58F21 947 aaPredicted RBP7.01□□□□□ -1.29
CALD1-219ENST00000480638 MUM1L1Q5H9M0 696 aa7.01□□□□□ -1.29
CALD1-219ENST00000480638 FKBP15Q5T1M5 1219 aa7.01□□□□□ -1.29
CALD1-219ENST00000480638 SSH1Q8WYL5 1049 aa7.01□□□□□ -1.29
CALD1-219ENST00000480638 FAXDC2Q96IV6 333 aa7.01□□□□□ -1.29
CALD1-219ENST00000480638 ZNF512Q96ME7 567 aaPredicted RBP7.01□□□□□ -1.29
CALD1-219ENST00000480638 SMAD5Q99717 465 aaKnown RBP7.01□□□□□ -1.29
CALD1-219ENST00000480638 GREM2Q9H772 168 aa7.01□□□□□ -1.29
CALD1-219ENST00000480638 DMRT3Q9NQL9 472 aa7.01□□□□□ -1.29
CALD1-219ENST00000480638 MKS1Q9NXB0 559 aa7.01□□□□□ -1.29
CALD1-219ENST00000480638 TSC22D4Q9Y3Q8 395 aa7.01□□□□□ -1.29
CALD1-219ENST00000480638 SHTN1A0MZ66 631 aa7□□□□□ -1.29
CALD1-219ENST00000480638 PHF2O75151 1096 aa7□□□□□ -1.29
CALD1-219ENST00000480638 ITGA10O75578 1167 aa7□□□□□ -1.29
CALD1-219ENST00000480638 RBP3P10745 1247 aa7□□□□□ -1.29
CALD1-219ENST00000480638 ANAPC15P60006 121 aa7□□□□□ -1.29
CALD1-219ENST00000480638 HHEXQ03014 270 aa7□□□□□ -1.29
CALD1-219ENST00000480638 PRKD1Q15139 912 aaPredicted RBP7□□□□□ -1.29
CALD1-219ENST00000480638 ELAVL1Q15717 326 aaKnown RBP7□□□□□ -1.29
CALD1-219ENST00000480638 GPR156Q8NFN8 814 aa7□□□□□ -1.29
CALD1-219ENST00000480638 IL17RAQ96F46 866 aa7□□□□□ -1.29
CALD1-219ENST00000480638 FUBP3Q96I24 572 aaKnown RBP eCLIP7□□□□□ -1.29
CALD1-219ENST00000480638 SLC2A13Q96QE2 648 aa7□□□□□ -1.29
CALD1-219ENST00000480638 GPRC5DQ9NZD1 345 aa7□□□□□ -1.29
CALD1-219ENST00000480638 ZBTB21Q9ULJ3 1066 aa7□□□□□ -1.29
CALD1-219ENST00000480638 AKR1B10O60218 316 aa6.99□□□□□ -1.29
CALD1-219ENST00000480638 PCDHGA12O60330 932 aa6.99□□□□□ -1.29
CALD1-219ENST00000480638 MCAMP43121 646 aa6.99□□□□□ -1.29
CALD1-219ENST00000480638 KRT85P78386 507 aa6.99□□□□□ -1.29
CALD1-219ENST00000480638 PPP3CAQ08209 521 aa6.99□□□□□ -1.29
CALD1-219ENST00000480638 FAM214AQ32MH5 1076 aa6.99□□□□□ -1.29
CALD1-219ENST00000480638 GJC2Q5T442 439 aaPredicted RBP6.99□□□□□ -1.29
CALD1-219ENST00000480638 SPTY2D1Q68D10 685 aaPredicted RBP6.99□□□□□ -1.29
CALD1-219ENST00000480638 MFSD5Q6N075 450 aa6.99□□□□□ -1.29
CALD1-219ENST00000480638 SGMS1Q86VZ5 419 aa6.99□□□□□ -1.29
CALD1-219ENST00000480638 JADE3Q92613 823 aa6.99□□□□□ -1.29
CALD1-219ENST00000480638 ADI1Q9BV57 179 aa6.99□□□□□ -1.29
CALD1-219ENST00000480638 RBM12Q9NTZ6 932 aaKnown RBP6.99□□□□□ -1.29
CALD1-219ENST00000480638 TRPS1Q9UHF7 1281 aa6.99□□□□□ -1.29
CALD1-219ENST00000480638 TESMINQ9Y4I5 508 aa6.99□□□□□ -1.29
CALD1-219ENST00000480638 PCDHGA9Q9Y5G4 932 aaKnown RBP6.99□□□□□ -1.29
CALD1-219ENST00000480638 PCDHGA8Q9Y5G5 932 aa6.99□□□□□ -1.29
CALD1-219ENST00000480638 PCDHGA7Q9Y5G6 932 aa6.99□□□□□ -1.29
CALD1-219ENST00000480638 PCDHGA6Q9Y5G7 932 aa6.99□□□□□ -1.29
CALD1-219ENST00000480638 PCDHGA3Q9Y5H0 932 aa6.99□□□□□ -1.29
CALD1-219ENST00000480638 PCDHGA2Q9Y5H1 932 aa6.99□□□□□ -1.29
CALD1-219ENST00000480638 TNKSO95271 1327 aa6.99□□□□□ -1.29
CALD1-219ENST00000480638 ADSLP30566 484 aaPredicted RBP6.98□□□□□ -1.29
CALD1-219ENST00000480638 CRHR1P34998 444 aa6.98□□□□□ -1.29
CALD1-219ENST00000480638 GZMKP49863 264 aa6.98□□□□□ -1.29
CALD1-219ENST00000480638 IGBP1P78318 339 aa6.98□□□□□ -1.29
CALD1-219ENST00000480638 MRPL49Q13405 166 aaKnown RBP6.98□□□□□ -1.29
CALD1-219ENST00000480638 ACAP2Q15057 778 aa6.98□□□□□ -1.29
CALD1-219ENST00000480638 PCBP2Q15366 365 aaKnown RBP eCLIP6.98□□□□□ -1.29
CALD1-219ENST00000480638 PTPN21Q16825 1174 aa6.98□□□□□ -1.29
CALD1-219ENST00000480638 SPDYAQ5MJ70 313 aa6.98□□□□□ -1.29
CALD1-219ENST00000480638 Q6ZVL8 140 aa6.98□□□□□ -1.29
CALD1-219ENST00000480638 ANKRD35Q8N283 1001 aa6.98□□□□□ -1.29
CALD1-219ENST00000480638 HOXB13Q92826 284 aaPredicted RBP6.98□□□□□ -1.29
CALD1-219ENST00000480638 MIEF2Q96C03 454 aa6.98□□□□□ -1.29
CALD1-219ENST00000480638 BORCS6Q96GS4 357 aa6.98□□□□□ -1.29
CALD1-219ENST00000480638 HECAQ9UBI9 543 aaPredicted RBP6.98□□□□□ -1.29
CALD1-219ENST00000480638 C1QTNF3-AMACRE9PGA6 284 aa6.97□□□□□ -1.29
CALD1-219ENST00000480638 ADCY6O43306 1168 aa6.97□□□□□ -1.29
CALD1-219ENST00000480638 HOXA3O43365 443 aaPredicted RBP6.97□□□□□ -1.29
CALD1-219ENST00000480638 XPOTO43592 962 aaKnown RBP6.97□□□□□ -1.29
CALD1-219ENST00000480638 GASTP01350 101 aa6.97□□□□□ -1.29
CALD1-219ENST00000480638 ACRV1P26436 265 aa6.97□□□□□ -1.29
CALD1-219ENST00000480638 ECHS1P30084 290 aa6.97□□□□□ -1.29
CALD1-219ENST00000480638 HIBADHP31937 336 aaKnown RBP6.97□□□□□ -1.29
CALD1-219ENST00000480638 EXOSC10Q01780 885 aaKnown RBP6.97□□□□□ -1.29
CALD1-219ENST00000480638 FAM180AQ6UWF9 173 aa6.97□□□□□ -1.29
CALD1-219ENST00000480638 APBB1IPQ7Z5R6 666 aaPredicted RBP6.97□□□□□ -1.29
CALD1-219ENST00000480638 ELOA2Q8IYF1 753 aaPredicted RBP6.97□□□□□ -1.29
CALD1-219ENST00000480638 CDC5LQ99459 802 aaKnown RBP6.97□□□□□ -1.29
CALD1-219ENST00000480638 GPR20Q99678 358 aa6.97□□□□□ -1.29
CALD1-219ENST00000480638 SLC13A1Q9BZW2 595 aa6.97□□□□□ -1.29
CALD1-219ENST00000480638 EPC1Q9H2F5 836 aa6.97□□□□□ -1.29
CALD1-219ENST00000480638 TYW1Q9NV66 732 aaKnown RBP6.97□□□□□ -1.29
CALD1-219ENST00000480638 TUBD1Q9UJT1 453 aa6.97□□□□□ -1.29
CALD1-219ENST00000480638 KLHL33A6NCF5 533 aa6.96□□□□□ -1.3
CALD1-219ENST00000480638 CYP27B1O15528 508 aa6.96□□□□□ -1.3
CALD1-219ENST00000480638 NDUFS2O75306 463 aa6.96□□□□□ -1.3
CALD1-219ENST00000480638 IPO13O94829 963 aaKnown RBP6.96□□□□□ -1.3
CALD1-219ENST00000480638 C5AR1P21730 350 aa6.96□□□□□ -1.3
CALD1-219ENST00000480638 MGAT2Q10469 447 aa6.96□□□□□ -1.3
CALD1-219ENST00000480638 PRAMEF14Q5SWL7 426 aa6.96□□□□□ -1.3
CALD1-219ENST00000480638 MB21D1Q8N884 522 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms