RNA–Protein interactions for RNA: ENST00000480362.5

UPF3A-206, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 965 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-206ENST00000480362 CBFA2T2O43439 604 aa19.21■□□□□ 0.67
UPF3A-206ENST00000480362 B4GALT4O60513 344 aa19.21■□□□□ 0.67
UPF3A-206ENST00000480362 EPB41P11171 864 aaKnown RBP19.21■□□□□ 0.67
UPF3A-206ENST00000480362 DARSP14868 501 aaKnown RBP19.21■□□□□ 0.67
UPF3A-206ENST00000480362 PSMC2P35998 433 aaKnown RBP19.21■□□□□ 0.67
UPF3A-206ENST00000480362 MATR3P43243 847 aaKnown RBP eCLIP19.21■□□□□ 0.67
UPF3A-206ENST00000480362 GJA8P48165 433 aa19.21■□□□□ 0.67
UPF3A-206ENST00000480362 MNX1P50219 401 aaPredicted RBP19.21■□□□□ 0.67
UPF3A-206ENST00000480362 CDK7P50613 346 aa19.21■□□□□ 0.67
UPF3A-206ENST00000480362 CRYBB1P53674 252 aaPredicted RBP19.21■□□□□ 0.67
UPF3A-206ENST00000480362 MARSP56192 900 aaKnown RBP19.21■□□□□ 0.67
UPF3A-206ENST00000480362 AMHR2Q16671 573 aa19.21■□□□□ 0.67
UPF3A-206ENST00000480362 TMEM132AQ24JP5 1023 aa19.21■□□□□ 0.67
UPF3A-206ENST00000480362 FRMD5Q7Z6J6 570 aa19.21■□□□□ 0.67
UPF3A-206ENST00000480362 PRIMPOLQ96LW4 560 aa19.21■□□□□ 0.67
UPF3A-206ENST00000480362 MKNK1Q9BUB5 465 aa19.21■□□□□ 0.67
UPF3A-206ENST00000480362 TRPV6Q9H1D0 765 aa19.21■□□□□ 0.67
UPF3A-206ENST00000480362 TRPV2Q9Y5S1 764 aa19.21■□□□□ 0.67
UPF3A-206ENST00000480362 CDY2AQ9Y6F7 541 aa19.21■□□□□ 0.67
UPF3A-206ENST00000480362 GOLGA8IPA6NC78 632 aa19.2■□□□□ 0.66
UPF3A-206ENST00000480362 GOLGA8JA6NMD2 632 aa19.2■□□□□ 0.66
UPF3A-206ENST00000480362 TOM1L1O75674 476 aa19.2■□□□□ 0.66
UPF3A-206ENST00000480362 PRKCSHP14314 528 aaPredicted RBP19.2■□□□□ 0.66
UPF3A-206ENST00000480362 FGFR4P22455 802 aa19.2■□□□□ 0.66
UPF3A-206ENST00000480362 EIF4BP23588 611 aaKnown RBP19.2■□□□□ 0.66
UPF3A-206ENST00000480362 THPOP40225 353 aa19.2■□□□□ 0.66
UPF3A-206ENST00000480362 SNX17Q15036 470 aa19.2■□□□□ 0.66
UPF3A-206ENST00000480362 ATF7IP2Q5U623 682 aa19.2■□□□□ 0.66
UPF3A-206ENST00000480362 TSHZ1Q6ZSZ6 1077 aa19.2■□□□□ 0.66
UPF3A-206ENST00000480362 FAM186BQ8IYM0 893 aa19.2■□□□□ 0.66
UPF3A-206ENST00000480362 RDH13Q8NBN7 331 aa19.2■□□□□ 0.66
UPF3A-206ENST00000480362 ZSWIM2Q8NEG5 633 aa19.2■□□□□ 0.66
UPF3A-206ENST00000480362 DHX38Q92620 1227 aaKnown RBP19.2■□□□□ 0.66
UPF3A-206ENST00000480362 SAAL1Q96ER3 474 aa19.2■□□□□ 0.66
UPF3A-206ENST00000480362 TCHPQ9BT92 498 aa19.2■□□□□ 0.66
UPF3A-206ENST00000480362 HAPLN2Q9GZV7 340 aa19.2■□□□□ 0.66
UPF3A-206ENST00000480362 METTL14Q9HCE5 456 aaKnown RBP19.2■□□□□ 0.66
UPF3A-206ENST00000480362 ANKFY1Q9P2R3 1169 aa19.2■□□□□ 0.66
UPF3A-206ENST00000480362 TNFSF13BQ9Y275 285 aa19.2■□□□□ 0.66
UPF3A-206ENST00000480362 A0A0B4J269 797 aa19.19■□□□□ 0.66
UPF3A-206ENST00000480362 A0A1B0GTH6 734 aa19.19■□□□□ 0.66
UPF3A-206ENST00000480362 N4BP3O15049 544 aa19.19■□□□□ 0.66
UPF3A-206ENST00000480362 CLDN3O15551 220 aa19.19■□□□□ 0.66
UPF3A-206ENST00000480362 TSPAN1O60635 241 aa19.19■□□□□ 0.66
UPF3A-206ENST00000480362 ERLIN2O94905 339 aa19.19■□□□□ 0.66
UPF3A-206ENST00000480362 NR1I3Q14994 352 aa19.19■□□□□ 0.66
UPF3A-206ENST00000480362 TRIM71Q2Q1W2 868 aaKnown RBP19.19■□□□□ 0.66
UPF3A-206ENST00000480362 FILIP1LQ4L180 1135 aa19.19■□□□□ 0.66
UPF3A-206ENST00000480362 CATSPER4Q7RTX7 472 aa19.19■□□□□ 0.66
UPF3A-206ENST00000480362 TMEM40Q8WWA1 233 aa19.19■□□□□ 0.66
UPF3A-206ENST00000480362 MRFAP1L1Q96HT8 127 aa19.19■□□□□ 0.66
UPF3A-206ENST00000480362 NOC4LQ9BVI4 516 aaKnown RBP19.19■□□□□ 0.66
UPF3A-206ENST00000480362 MCOLN1Q9GZU1 580 aa19.19■□□□□ 0.66
UPF3A-206ENST00000480362 RTN4Q9NQC3 1192 aaKnown RBP19.19■□□□□ 0.66
UPF3A-206ENST00000480362 ARMCX3Q9UH62 379 aaPredicted RBP19.19■□□□□ 0.66
UPF3A-206ENST00000480362 AGO2Q9UKV8 859 aaKnown RBP19.19■□□□□ 0.66
UPF3A-206ENST00000480362 CNTNAP2Q9UHC6 1331 aa19.19■□□□□ 0.66
UPF3A-206ENST00000480362 ABLIM1O14639 778 aa19.18■□□□□ 0.66
UPF3A-206ENST00000480362 KIAA0391O15091 583 aaKnown RBP19.18■□□□□ 0.66
UPF3A-206ENST00000480362 CHRNA1P02708 482 aa19.18■□□□□ 0.66
UPF3A-206ENST00000480362 TPM2P07951 284 aa19.18■□□□□ 0.66
UPF3A-206ENST00000480362 CTSHP09668 335 aa19.18■□□□□ 0.66
UPF3A-206ENST00000480362 ARF4P18085 180 aaPredicted RBP19.18■□□□□ 0.66
UPF3A-206ENST00000480362 PROZP22891 400 aa19.18■□□□□ 0.66
UPF3A-206ENST00000480362 MGAT3Q09327 533 aa19.18■□□□□ 0.66
UPF3A-206ENST00000480362 PCBP1Q15365 356 aaKnown RBP eCLIP19.18■□□□□ 0.66
UPF3A-206ENST00000480362 MAN2A1Q16706 1144 aa19.18■□□□□ 0.66
UPF3A-206ENST00000480362 EEF1DP3Q658K8 133 aa19.18■□□□□ 0.66
UPF3A-206ENST00000480362 SLC39A5Q6ZMH5 540 aa19.18■□□□□ 0.66
UPF3A-206ENST00000480362 ZBTB33Q86T24 672 aa19.18■□□□□ 0.66
UPF3A-206ENST00000480362 CDR2LQ86X02 465 aaPredicted RBP19.18■□□□□ 0.66
UPF3A-206ENST00000480362 TRIM59Q8IWR1 403 aa19.18■□□□□ 0.66
UPF3A-206ENST00000480362 GPD1LQ8N335 351 aa19.18■□□□□ 0.66
UPF3A-206ENST00000480362 BORCS6Q96GS4 357 aa19.18■□□□□ 0.66
UPF3A-206ENST00000480362 CPB2Q96IY4 423 aa19.18■□□□□ 0.66
UPF3A-206ENST00000480362 MSTO1Q9BUK6 570 aa19.18■□□□□ 0.66
UPF3A-206ENST00000480362 TMEM106CQ9BVX2 250 aa19.18■□□□□ 0.66
UPF3A-206ENST00000480362 PTPRHQ9HD43 1115 aa19.18■□□□□ 0.66
UPF3A-206ENST00000480362 HTTP42858 3142 aa19.18■□□□□ 0.66
UPF3A-206ENST00000480362 MAPK13O15264 365 aa19.17■□□□□ 0.66
UPF3A-206ENST00000480362 TEX33O43247 280 aa19.17■□□□□ 0.66
UPF3A-206ENST00000480362 EXTL3O43909 919 aa19.17■□□□□ 0.66
UPF3A-206ENST00000480362 LDHAP00338 332 aaKnown RBP19.17■□□□□ 0.66
UPF3A-206ENST00000480362 TPM3P06753 285 aa19.17■□□□□ 0.66
UPF3A-206ENST00000480362 HARSP12081 509 aaKnown RBP19.17■□□□□ 0.66
UPF3A-206ENST00000480362 SFPQP23246 707 aaKnown RBP eCLIP19.17■□□□□ 0.66
UPF3A-206ENST00000480362 MCL1Q07820 350 aa19.17■□□□□ 0.66
UPF3A-206ENST00000480362 NCBP1Q09161 790 aaKnown RBP19.17■□□□□ 0.66
UPF3A-206ENST00000480362 VWA3BQ502W6 1294 aa19.17■□□□□ 0.66
UPF3A-206ENST00000480362 MIIPQ5JXC2 388 aa19.17■□□□□ 0.66
UPF3A-206ENST00000480362 MPZL3Q6UWV2 235 aa19.17■□□□□ 0.66
UPF3A-206ENST00000480362 CBWD2Q8IUF1 395 aa19.17■□□□□ 0.66
UPF3A-206ENST00000480362 FAM126BQ8IXS8 530 aa19.17■□□□□ 0.66
UPF3A-206ENST00000480362 ANKLE1Q8NAG6 615 aa19.17■□□□□ 0.66
UPF3A-206ENST00000480362 FBXL18Q96ME1 805 aa19.17■□□□□ 0.66
UPF3A-206ENST00000480362 FAM213AQ9BRX8 229 aa19.17■□□□□ 0.66
UPF3A-206ENST00000480362 KIAA1586Q9HCI6 787 aa19.17■□□□□ 0.66
UPF3A-206ENST00000480362 INTS13Q9NVM9 706 aa19.17■□□□□ 0.66
UPF3A-206ENST00000480362 A0A1B0GUA9 196 aa19.16■□□□□ 0.66
UPF3A-206ENST00000480362 PES1O00541 588 aaKnown RBP19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms