RNA–Protein interactions for RNA: ENST00000480219.1

SCAMP3-207, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 2

Gene SCAMP3, Length 752 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-207ENST00000480219 TPM4P67936 248 aa18.43■□□□□ 0.54
SCAMP3-207ENST00000480219 ENPEPQ07075 957 aa18.43■□□□□ 0.54
SCAMP3-207ENST00000480219 SPAG1Q07617 926 aa18.43■□□□□ 0.54
SCAMP3-207ENST00000480219 MCL1Q07820 350 aa18.43■□□□□ 0.54
SCAMP3-207ENST00000480219 ADAM9Q13443 819 aa18.43■□□□□ 0.54
SCAMP3-207ENST00000480219 PRPF4BQ13523 1007 aaKnown RBP18.43■□□□□ 0.54
SCAMP3-207ENST00000480219 SLFN12LQ6IEE8 588 aa18.43■□□□□ 0.54
SCAMP3-207ENST00000480219 SARM1Q6SZW1 724 aa18.43■□□□□ 0.54
SCAMP3-207ENST00000480219 APTXQ7Z2E3 356 aaKnown RBP18.43■□□□□ 0.54
SCAMP3-207ENST00000480219 NECAB2Q7Z6G3 386 aa18.43■□□□□ 0.54
SCAMP3-207ENST00000480219 CCDC155Q8N6L0 562 aa18.43■□□□□ 0.54
SCAMP3-207ENST00000480219 USP38Q8NB14 1042 aa18.43■□□□□ 0.54
SCAMP3-207ENST00000480219 PAWRQ96IZ0 340 aaKnown RBP18.43■□□□□ 0.54
SCAMP3-207ENST00000480219 ZNF668Q96K58 619 aaPredicted RBP18.43■□□□□ 0.54
SCAMP3-207ENST00000480219 A0A1B0GUA9 196 aa18.42■□□□□ 0.54
SCAMP3-207ENST00000480219 TISP43B9A030 160 aa18.42■□□□□ 0.54
SCAMP3-207ENST00000480219 SFPQP23246 707 aaKnown RBP eCLIP18.42■□□□□ 0.54
SCAMP3-207ENST00000480219 HOXA11P31270 313 aaPredicted RBP18.42■□□□□ 0.54
SCAMP3-207ENST00000480219 THPOP40225 353 aa18.42■□□□□ 0.54
SCAMP3-207ENST00000480219 MRE11P49959 708 aa18.42■□□□□ 0.54
SCAMP3-207ENST00000480219 TPD52L1Q16890 204 aaPredicted RBP18.42■□□□□ 0.54
SCAMP3-207ENST00000480219 FAM114A1Q8IWE2 563 aa18.42■□□□□ 0.54
SCAMP3-207ENST00000480219 BORCS6Q96GS4 357 aa18.42■□□□□ 0.54
SCAMP3-207ENST00000480219 CBWD1Q9BRT8 395 aa18.42■□□□□ 0.54
SCAMP3-207ENST00000480219 HAPLN2Q9GZV7 340 aa18.42■□□□□ 0.54
SCAMP3-207ENST00000480219 AGPAT5Q9NUQ2 364 aa18.42■□□□□ 0.54
SCAMP3-207ENST00000480219 HSPBP1Q9NZL4 362 aa18.42■□□□□ 0.54
SCAMP3-207ENST00000480219 LIMA1Q9UHB6 759 aaKnown RBP18.42■□□□□ 0.54
SCAMP3-207ENST00000480219 KIAA0100Q14667 2235 aaKnown RBP18.42■□□□□ 0.54
SCAMP3-207ENST00000480219 CLIC2O15247 247 aa18.41■□□□□ 0.54
SCAMP3-207ENST00000480219 B4GALT5O43286 388 aa18.41■□□□□ 0.54
SCAMP3-207ENST00000480219 FAM189A1O60320 539 aa18.41■□□□□ 0.54
SCAMP3-207ENST00000480219 ARF4P18085 180 aaPredicted RBP18.41■□□□□ 0.54
SCAMP3-207ENST00000480219 POU5F1Q01860 360 aaKnown RBP18.41■□□□□ 0.54
SCAMP3-207ENST00000480219 BFSP2Q13515 415 aa18.41■□□□□ 0.54
SCAMP3-207ENST00000480219 HSP90AA2PQ14568 343 aaPredicted RBP18.41■□□□□ 0.54
SCAMP3-207ENST00000480219 TCP11X2Q5H9J9 407 aa18.41■□□□□ 0.54
SCAMP3-207ENST00000480219 FBXO47Q5MNV8 452 aa18.41■□□□□ 0.54
SCAMP3-207ENST00000480219 ZNF618Q5T7W0 954 aa18.41■□□□□ 0.54
SCAMP3-207ENST00000480219 ATF7IP2Q5U623 682 aa18.41■□□□□ 0.54
SCAMP3-207ENST00000480219 ARMCX5Q6P1M9 558 aa18.41■□□□□ 0.54
SCAMP3-207ENST00000480219 MPZL3Q6UWV2 235 aa18.41■□□□□ 0.54
SCAMP3-207ENST00000480219 FRMD5Q7Z6J6 570 aa18.41■□□□□ 0.54
SCAMP3-207ENST00000480219 FAM228AQ86W67 206 aa18.41■□□□□ 0.54
SCAMP3-207ENST00000480219 XXYLT1Q8NBI6 393 aa18.41■□□□□ 0.54
SCAMP3-207ENST00000480219 CCDC51Q96ER9 411 aa18.41■□□□□ 0.54
SCAMP3-207ENST00000480219 BICD1Q96G01 975 aa18.41■□□□□ 0.54
SCAMP3-207ENST00000480219 SCLT1Q96NL6 688 aa18.41■□□□□ 0.54
SCAMP3-207ENST00000480219 PPP1R16BQ96T49 567 aa18.41■□□□□ 0.54
SCAMP3-207ENST00000480219 KIAA1586Q9HCI6 787 aa18.41■□□□□ 0.54
SCAMP3-207ENST00000480219 AKAP3O75969 853 aa18.4■□□□□ 0.54
SCAMP3-207ENST00000480219 ERLIN2O94905 339 aa18.4■□□□□ 0.54
SCAMP3-207ENST00000480219 ATP1A3P13637 1013 aa18.4■□□□□ 0.54
SCAMP3-207ENST00000480219 TLE2Q04725 743 aa18.4■□□□□ 0.54
SCAMP3-207ENST00000480219 FAAP100Q0VG06 881 aa18.4■□□□□ 0.54
SCAMP3-207ENST00000480219 CNOT6LQ96LI5 555 aaKnown RBP18.4■□□□□ 0.54
SCAMP3-207ENST00000480219 PDZD7Q9H5P4 517 aa18.4■□□□□ 0.54
SCAMP3-207ENST00000480219 METTL14Q9HCE5 456 aaKnown RBP18.4■□□□□ 0.54
SCAMP3-207ENST00000480219 TBX21Q9UL17 535 aa18.4■□□□□ 0.54
SCAMP3-207ENST00000480219 NOC2LQ9Y3T9 749 aaKnown RBP18.4■□□□□ 0.54
SCAMP3-207ENST00000480219 DCDC2CA8MYV0 355 aa18.39■□□□□ 0.53
SCAMP3-207ENST00000480219 KCNJ18B7U540 433 aa18.39■□□□□ 0.53
SCAMP3-207ENST00000480219 N4BP3O15049 544 aa18.39■□□□□ 0.53
SCAMP3-207ENST00000480219 CLDN3O15551 220 aa18.39■□□□□ 0.53
SCAMP3-207ENST00000480219 CSDE1O75534 798 aaKnown RBP18.39■□□□□ 0.53
SCAMP3-207ENST00000480219 LDHAP00338 332 aaKnown RBP18.39■□□□□ 0.53
SCAMP3-207ENST00000480219 MCF2P10911 925 aa18.39■□□□□ 0.53
SCAMP3-207ENST00000480219 SELPP16109 830 aa18.39■□□□□ 0.53
SCAMP3-207ENST00000480219 PSMC2P35998 433 aaKnown RBP18.39■□□□□ 0.53
SCAMP3-207ENST00000480219 CASP4P49662 377 aa18.39■□□□□ 0.53
SCAMP3-207ENST00000480219 ATN1P54259 1190 aaPredicted RBP18.39■□□□□ 0.53
SCAMP3-207ENST00000480219 KCNJ12Q14500 433 aa18.39■□□□□ 0.53
SCAMP3-207ENST00000480219 LPIN1Q14693 890 aa18.39■□□□□ 0.53
SCAMP3-207ENST00000480219 TRIM60Q495X7 471 aa18.39■□□□□ 0.53
SCAMP3-207ENST00000480219 CATSPER4Q7RTX7 472 aa18.39■□□□□ 0.53
SCAMP3-207ENST00000480219 TRIM59Q8IWR1 403 aa18.39■□□□□ 0.53
SCAMP3-207ENST00000480219 POMGNT1Q8WZA1 660 aa18.39■□□□□ 0.53
SCAMP3-207ENST00000480219 ZBTB45Q96K62 511 aaPredicted RBP18.39■□□□□ 0.53
SCAMP3-207ENST00000480219 NOC4LQ9BVI4 516 aaKnown RBP18.39■□□□□ 0.53
SCAMP3-207ENST00000480219 ERVK-5Q9HDB9 667 aa18.39■□□□□ 0.53
SCAMP3-207ENST00000480219 CHST12Q9NRB3 414 aa18.39■□□□□ 0.53
SCAMP3-207ENST00000480219 USP20Q9Y2K6 914 aa18.39■□□□□ 0.53
SCAMP3-207ENST00000480219 TANC1Q9C0D5 1861 aa18.38■□□□□ 0.53
SCAMP3-207ENST00000480219 OGTO15294 1046 aa18.38■□□□□ 0.53
SCAMP3-207ENST00000480219 AP5Z1O43299 807 aa18.38■□□□□ 0.53
SCAMP3-207ENST00000480219 EXTL3O43909 919 aa18.38■□□□□ 0.53
SCAMP3-207ENST00000480219 PQBP1O60828 265 aaKnown RBP18.38■□□□□ 0.53
SCAMP3-207ENST00000480219 RPS6KA5O75582 802 aa18.38■□□□□ 0.53
SCAMP3-207ENST00000480219 PARNO95453 639 aaKnown RBP18.38■□□□□ 0.53
SCAMP3-207ENST00000480219 CTSHP09668 335 aa18.38■□□□□ 0.53
SCAMP3-207ENST00000480219 NCBP1Q09161 790 aaKnown RBP18.38■□□□□ 0.53
SCAMP3-207ENST00000480219 MBTPS1Q14703 1052 aa18.38■□□□□ 0.53
SCAMP3-207ENST00000480219 NOLC1Q14978 699 aaKnown RBP eCLIP18.38■□□□□ 0.53
SCAMP3-207ENST00000480219 LRRC26Q2I0M4 334 aa18.38■□□□□ 0.53
SCAMP3-207ENST00000480219 EEF1DP3Q658K8 133 aa18.38■□□□□ 0.53
SCAMP3-207ENST00000480219 NOTUMQ6P988 496 aa18.38■□□□□ 0.53
SCAMP3-207ENST00000480219 CRELD2Q6UXH1 353 aaPredicted RBP18.38■□□□□ 0.53
SCAMP3-207ENST00000480219 LRRC8DQ7L1W4 858 aa18.38■□□□□ 0.53
SCAMP3-207ENST00000480219 GPD1LQ8N335 351 aa18.38■□□□□ 0.53
SCAMP3-207ENST00000480219 TRAIPQ9BWF2 469 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms