RNA–Protein interactions for RNA: ENST00000480055.5

SMURF1-204, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

TSL 3

Gene SMURF1, Length 1,012 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-204ENST00000480055 CTSAP10619 480 aa11.6□□□□□ -0.55
SMURF1-204ENST00000480055 SKIP12755 728 aa11.6□□□□□ -0.55
SMURF1-204ENST00000480055 CIITAP33076 1130 aa11.6□□□□□ -0.55
SMURF1-204ENST00000480055 PHKA2P46019 1235 aa11.6□□□□□ -0.55
SMURF1-204ENST00000480055 POLGP54098 1239 aaPredicted RBP11.6□□□□□ -0.55
SMURF1-204ENST00000480055 NLRP5P59047 1200 aa11.6□□□□□ -0.55
SMURF1-204ENST00000480055 TDGQ13569 410 aa11.6□□□□□ -0.55
SMURF1-204ENST00000480055 UGCGQ16739 394 aa11.6□□□□□ -0.55
SMURF1-204ENST00000480055 TSGA10IPQ3SY00 556 aa11.6□□□□□ -0.55
SMURF1-204ENST00000480055 GLB1LQ6UWU2 654 aa11.6□□□□□ -0.55
SMURF1-204ENST00000480055 TMC5Q6UXY8 1006 aa11.6□□□□□ -0.55
SMURF1-204ENST00000480055 CCDC149Q6ZUS6 474 aa11.6□□□□□ -0.55
SMURF1-204ENST00000480055 DDX53Q86TM3 631 aaKnown RBP11.6□□□□□ -0.55
SMURF1-204ENST00000480055 TMEM173Q86WV6 379 aaPredicted RBP11.6□□□□□ -0.55
SMURF1-204ENST00000480055 RHPN2Q8IUC4 686 aa11.6□□□□□ -0.55
SMURF1-204ENST00000480055 RSPH1Q8WYR4 309 aa11.6□□□□□ -0.55
SMURF1-204ENST00000480055 GJA10Q969M2 543 aa11.6□□□□□ -0.55
SMURF1-204ENST00000480055 ACSF2Q96CM8 615 aaPredicted RBP11.6□□□□□ -0.55
SMURF1-204ENST00000480055 RIT2Q99578 217 aa11.6□□□□□ -0.55
SMURF1-204ENST00000480055 SH2D3AQ9BRG2 576 aa11.6□□□□□ -0.55
SMURF1-204ENST00000480055 SLC26A6Q9BXS9 759 aa11.6□□□□□ -0.55
SMURF1-204ENST00000480055 INO80BQ9C086 356 aaPredicted RBP11.6□□□□□ -0.55
SMURF1-204ENST00000480055 UNC45AQ9H3U1 944 aa11.6□□□□□ -0.55
SMURF1-204ENST00000480055 NCOR2Q9Y618 2525 aa11.6□□□□□ -0.55
SMURF1-204ENST00000480055 FRYLO94915 3013 aa11.6□□□□□ -0.55
SMURF1-204ENST00000480055 A0A087WZ62 844 aa11.59□□□□□ -0.55
SMURF1-204ENST00000480055 MED19A0JLT2 244 aaPredicted RBP11.59□□□□□ -0.55
SMURF1-204ENST00000480055 CARNS1A5YM72 827 aa11.59□□□□□ -0.55
SMURF1-204ENST00000480055 ACTN4O43707 911 aaKnown RBP11.59□□□□□ -0.55
SMURF1-204ENST00000480055 SSBP05455 408 aaKnown RBP eCLIP11.59□□□□□ -0.55
SMURF1-204ENST00000480055 KLRC2P26717 231 aa11.59□□□□□ -0.55
SMURF1-204ENST00000480055 USP11P51784 963 aa11.59□□□□□ -0.55
SMURF1-204ENST00000480055 DRP2Q13474 957 aa11.59□□□□□ -0.55
SMURF1-204ENST00000480055 XKR3Q5GH77 459 aa11.59□□□□□ -0.55
SMURF1-204ENST00000480055 NOMO2Q5JPE7 1267 aa11.59□□□□□ -0.55
SMURF1-204ENST00000480055 OTOP3Q7RTS5 596 aa11.59□□□□□ -0.55
SMURF1-204ENST00000480055 CATSPER4Q7RTX7 472 aa11.59□□□□□ -0.55
SMURF1-204ENST00000480055 GPR149Q86SP6 731 aa11.59□□□□□ -0.55
SMURF1-204ENST00000480055 PPFIBP1Q86W92 1011 aa11.59□□□□□ -0.55
SMURF1-204ENST00000480055 SIX5Q8N196 739 aa11.59□□□□□ -0.55
SMURF1-204ENST00000480055 URGCPQ8TCY9 931 aa11.59□□□□□ -0.55
SMURF1-204ENST00000480055 BCL7CQ8WUZ0 217 aaPredicted RBP11.59□□□□□ -0.55
SMURF1-204ENST00000480055 SLC5A5Q92911 643 aa11.59□□□□□ -0.55
SMURF1-204ENST00000480055 LENG9Q96B70 501 aa11.59□□□□□ -0.55
SMURF1-204ENST00000480055 RMDN1Q96DB5 314 aa11.59□□□□□ -0.55
SMURF1-204ENST00000480055 IGSF21Q96ID5 467 aa11.59□□□□□ -0.55
SMURF1-204ENST00000480055 NLRP4Q96MN2 994 aa11.59□□□□□ -0.55
SMURF1-204ENST00000480055 JAKMIP1Q96N16 626 aaKnown RBP11.59□□□□□ -0.55
SMURF1-204ENST00000480055 FAM193BQ96PV7 902 aaPredicted RBP11.59□□□□□ -0.55
SMURF1-204ENST00000480055 FDXACB1Q9BRP7 624 aaPredicted RBP11.59□□□□□ -0.55
SMURF1-204ENST00000480055 EMILIN2Q9BXX0 1053 aa11.59□□□□□ -0.55
SMURF1-204ENST00000480055 SEMA4AQ9H3S1 761 aa11.59□□□□□ -0.55
SMURF1-204ENST00000480055 KCNK12Q9HB15 430 aa11.59□□□□□ -0.55
SMURF1-204ENST00000480055 TBC1D13Q9NVG8 400 aa11.59□□□□□ -0.55
SMURF1-204ENST00000480055 VPS54Q9P1Q0 977 aa11.59□□□□□ -0.55
SMURF1-204ENST00000480055 SUCLA2Q9P2R7 463 aaPredicted RBP11.59□□□□□ -0.55
SMURF1-204ENST00000480055 FBXL21Q9UKT6 434 aa11.59□□□□□ -0.55
SMURF1-204ENST00000480055 PCDHB3Q9Y5E6 796 aa11.59□□□□□ -0.55
SMURF1-204ENST00000480055 EPG5Q9HCE0 2579 aa11.58□□□□□ -0.56
SMURF1-204ENST00000480055 TMEM150BA6NC51 233 aa11.58□□□□□ -0.56
SMURF1-204ENST00000480055 LMNAP02545 664 aaKnown RBP11.58□□□□□ -0.56
SMURF1-204ENST00000480055 GALTP07902 379 aa11.58□□□□□ -0.56
SMURF1-204ENST00000480055 RAB27AP51159 221 aa11.58□□□□□ -0.56
SMURF1-204ENST00000480055 CCT2P78371 535 aaKnown RBP11.58□□□□□ -0.56
SMURF1-204ENST00000480055 PTPN14Q15678 1187 aa11.58□□□□□ -0.56
SMURF1-204ENST00000480055 BMP2KLQ5H9B9 411 aa11.58□□□□□ -0.56
SMURF1-204ENST00000480055 BLOC1S2Q6QNY1 142 aa11.58□□□□□ -0.56
SMURF1-204ENST00000480055 TBCKQ8TEA7 893 aa11.58□□□□□ -0.56
SMURF1-204ENST00000480055 PGBD4Q96DM1 585 aa11.58□□□□□ -0.56
SMURF1-204ENST00000480055 VN1R3Q9BXE9 311 aa11.58□□□□□ -0.56
SMURF1-204ENST00000480055 NIFKQ9BYG3 293 aaKnown RBP11.58□□□□□ -0.56
SMURF1-204ENST00000480055 SLKQ9H2G2 1235 aaPredicted RBP11.58□□□□□ -0.56
SMURF1-204ENST00000480055 NRDE2Q9H7Z3 1164 aa11.58□□□□□ -0.56
SMURF1-204ENST00000480055 FAM105AQ9NUU6 356 aa11.58□□□□□ -0.56
SMURF1-204ENST00000480055 TPRP12270 2363 aaKnown RBP11.57□□□□□ -0.56
SMURF1-204ENST00000480055 CDC45O75419 566 aa11.57□□□□□ -0.56
SMURF1-204ENST00000480055 OFD1O75665 1012 aa11.57□□□□□ -0.56
SMURF1-204ENST00000480055 RFX1P22670 979 aa11.57□□□□□ -0.56
SMURF1-204ENST00000480055 TARBP2Q15633 366 aaKnown RBP11.57□□□□□ -0.56
SMURF1-204ENST00000480055 LETM2Q2VYF4 491 aa11.57□□□□□ -0.56
SMURF1-204ENST00000480055 C15orf39Q6ZRI6 1047 aa11.57□□□□□ -0.56
SMURF1-204ENST00000480055 DGLUCYQ7Z3D6 616 aa11.57□□□□□ -0.56
SMURF1-204ENST00000480055 ZNF410Q86VK4 478 aa11.57□□□□□ -0.56
SMURF1-204ENST00000480055 SKAP1Q86WV1 359 aa11.57□□□□□ -0.56
SMURF1-204ENST00000480055 KSR1Q8IVT5 923 aa11.57□□□□□ -0.56
SMURF1-204ENST00000480055 RDM1Q8NG50 284 aa11.57□□□□□ -0.56
SMURF1-204ENST00000480055 TRAIPQ9BWF2 469 aa11.57□□□□□ -0.56
SMURF1-204ENST00000480055 RNF26Q9BY78 433 aaPredicted RBP11.57□□□□□ -0.56
SMURF1-204ENST00000480055 IGSF9Q9P2J2 1179 aa11.57□□□□□ -0.56
SMURF1-204ENST00000480055 WNT16Q9UBV4 365 aa11.57□□□□□ -0.56
SMURF1-204ENST00000480055 DNAJB4Q9UDY4 337 aa11.57□□□□□ -0.56
SMURF1-204ENST00000480055 MEIS3P2A8K0S8 358 aa11.56□□□□□ -0.56
SMURF1-204ENST00000480055 C2CD2LO14523 706 aa11.56□□□□□ -0.56
SMURF1-204ENST00000480055 NARSO43776 548 aaKnown RBP11.56□□□□□ -0.56
SMURF1-204ENST00000480055 N4BP1O75113 896 aaKnown RBP11.56□□□□□ -0.56
SMURF1-204ENST00000480055 MAFO75444 373 aaPredicted RBP11.56□□□□□ -0.56
SMURF1-204ENST00000480055 PSMD10O75832 226 aa11.56□□□□□ -0.56
SMURF1-204ENST00000480055 ALDH2P05091 517 aa11.56□□□□□ -0.56
SMURF1-204ENST00000480055 SLC11A1P49279 550 aa11.56□□□□□ -0.56
SMURF1-204ENST00000480055 CLCN4P51793 760 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms