RNA–Protein interactions for RNA: ENST00000479653.5

CCDC18-208, Transcript of coiled-coil domain containing 18, humanhuman

TSL 3

Gene CCDC18, Length 541 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC18-208ENST00000479653 SFPQP23246 707 aaKnown RBP eCLIP12.59□□□□□ -0.39
CCDC18-208ENST00000479653 SMARCA1P28370 1054 aa12.59□□□□□ -0.39
CCDC18-208ENST00000479653 CCR3P51677 355 aa12.59□□□□□ -0.39
CCDC18-208ENST00000479653 RING1Q06587 406 aa12.59□□□□□ -0.39
CCDC18-208ENST00000479653 SF3A2Q15428 464 aaKnown RBP12.59□□□□□ -0.39
CCDC18-208ENST00000479653 B4GALNT3Q6L9W6 998 aa12.59□□□□□ -0.39
CCDC18-208ENST00000479653 HEATR3Q7Z4Q2 680 aa12.59□□□□□ -0.39
CCDC18-208ENST00000479653 CCDC82Q8N4S0 544 aa12.59□□□□□ -0.39
CCDC18-208ENST00000479653 SRBD1Q8N5C6 995 aaKnown RBP12.59□□□□□ -0.39
CCDC18-208ENST00000479653 ITFG1Q8TB96 612 aa12.59□□□□□ -0.39
CCDC18-208ENST00000479653 B3GALT6Q96L58 329 aa12.59□□□□□ -0.39
CCDC18-208ENST00000479653 LZTS2Q9BRK4 669 aa12.59□□□□□ -0.39
CCDC18-208ENST00000479653 NRBP2Q9NSY0 501 aa12.59□□□□□ -0.39
CCDC18-208ENST00000479653 SAMM50Q9Y512 469 aa12.59□□□□□ -0.39
CCDC18-208ENST00000479653 PCDHB2Q9Y5E7 798 aa12.59□□□□□ -0.39
CCDC18-208ENST00000479653 A0A087WZ62 844 aa12.58□□□□□ -0.4
CCDC18-208ENST00000479653 CHURC1-FNTBB4DL54 471 aa12.58□□□□□ -0.4
CCDC18-208ENST00000479653 AXIN1O15169 862 aa12.58□□□□□ -0.4
CCDC18-208ENST00000479653 ZNF623O75123 536 aa12.58□□□□□ -0.4
CCDC18-208ENST00000479653 RPL17P18621 184 aaKnown RBP12.58□□□□□ -0.4
CCDC18-208ENST00000479653 CXCL12P48061 93 aa12.58□□□□□ -0.4
CCDC18-208ENST00000479653 FNTBP49356 437 aa12.58□□□□□ -0.4
CCDC18-208ENST00000479653 GNAQP50148 359 aa12.58□□□□□ -0.4
CCDC18-208ENST00000479653 RAB27AP51159 221 aa12.58□□□□□ -0.4
CCDC18-208ENST00000479653 DSG1Q02413 1049 aa12.58□□□□□ -0.4
CCDC18-208ENST00000479653 FOXC1Q12948 553 aa12.58□□□□□ -0.4
CCDC18-208ENST00000479653 CCDC6Q16204 474 aa12.58□□□□□ -0.4
CCDC18-208ENST00000479653 PSAPL1Q6NUJ1 521 aa12.58□□□□□ -0.4
CCDC18-208ENST00000479653 AGMOQ6ZNB7 445 aa12.58□□□□□ -0.4
CCDC18-208ENST00000479653 CEP68Q76N32 757 aa12.58□□□□□ -0.4
CCDC18-208ENST00000479653 CATSPER4Q7RTX7 472 aa12.58□□□□□ -0.4
CCDC18-208ENST00000479653 RALYLQ86SE5 291 aaKnown RBP12.58□□□□□ -0.4
CCDC18-208ENST00000479653 PLA2G4DQ86XP0 818 aa12.58□□□□□ -0.4
CCDC18-208ENST00000479653 MAP4K1Q92918 833 aa12.58□□□□□ -0.4
CCDC18-208ENST00000479653 FAM167AQ96KS9 214 aa12.58□□□□□ -0.4
CCDC18-208ENST00000479653 FDXACB1Q9BRP7 624 aaPredicted RBP12.58□□□□□ -0.4
CCDC18-208ENST00000479653 RSAD1Q9HA92 442 aa12.58□□□□□ -0.4
CCDC18-208ENST00000479653 LMAN1LQ9HAT1 526 aa12.58□□□□□ -0.4
CCDC18-208ENST00000479653 MARCH5Q9NX47 278 aa12.58□□□□□ -0.4
CCDC18-208ENST00000479653 PCDHA10Q9Y5I2 948 aa12.58□□□□□ -0.4
CCDC18-208ENST00000479653 DSPP15924 2871 aaKnown RBP12.58□□□□□ -0.4
CCDC18-208ENST00000479653 SRRM3A6NNA2 597 aaPredicted RBP12.57□□□□□ -0.4
CCDC18-208ENST00000479653 IPO5O00410 1097 aaKnown RBP12.57□□□□□ -0.4
CCDC18-208ENST00000479653 DHX15O43143 795 aaKnown RBP12.57□□□□□ -0.4
CCDC18-208ENST00000479653 ZIC2O95409 532 aaPredicted RBP12.57□□□□□ -0.4
CCDC18-208ENST00000479653 PAPLNO95428 1278 aa12.57□□□□□ -0.4
CCDC18-208ENST00000479653 SPINK2P20155 84 aa12.57□□□□□ -0.4
CCDC18-208ENST00000479653 LIMK1P53667 647 aa12.57□□□□□ -0.4
CCDC18-208ENST00000479653 PPM1LQ5SGD2 360 aa12.57□□□□□ -0.4
CCDC18-208ENST00000479653 STPG1Q5TH74 334 aa12.57□□□□□ -0.4
CCDC18-208ENST00000479653 HEATR6Q6AI08 1181 aaKnown RBP12.57□□□□□ -0.4
CCDC18-208ENST00000479653 LILRA6Q6PI73 481 aa12.57□□□□□ -0.4
CCDC18-208ENST00000479653 ZNF654Q8IZM8 581 aa12.57□□□□□ -0.4
CCDC18-208ENST00000479653 FAM160A2Q8N612 972 aaPredicted RBP12.57□□□□□ -0.4
CCDC18-208ENST00000479653 ZNF577Q9BSK1 485 aa12.57□□□□□ -0.4
CCDC18-208ENST00000479653 INO80BQ9C086 356 aaPredicted RBP12.57□□□□□ -0.4
CCDC18-208ENST00000479653 CHRDQ9H2X0 955 aa12.57□□□□□ -0.4
CCDC18-208ENST00000479653 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.57□□□□□ -0.4
CCDC18-208ENST00000479653 RXFP3Q9NSD7 469 aa12.57□□□□□ -0.4
CCDC18-208ENST00000479653 MIA3Q5JRA6 1907 aa12.56□□□□□ -0.4
CCDC18-208ENST00000479653 EVPLQ92817 2033 aa12.56□□□□□ -0.4
CCDC18-208ENST00000479653 F8W810 466 aa12.56□□□□□ -0.4
CCDC18-208ENST00000479653 MAN2B1O00754 1011 aa12.56□□□□□ -0.4
CCDC18-208ENST00000479653 CCL16O15467 120 aa12.56□□□□□ -0.4
CCDC18-208ENST00000479653 NR1I2O75469 434 aa12.56□□□□□ -0.4
CCDC18-208ENST00000479653 C1RP00736 705 aa12.56□□□□□ -0.4
CCDC18-208ENST00000479653 FOSP01100 380 aaPredicted RBP12.56□□□□□ -0.4
CCDC18-208ENST00000479653 OATP04181 439 aa12.56□□□□□ -0.4
CCDC18-208ENST00000479653 CNR2P34972 360 aa12.56□□□□□ -0.4
CCDC18-208ENST00000479653 CDC42EP1Q00587 391 aa12.56□□□□□ -0.4
CCDC18-208ENST00000479653 SATB1Q01826 763 aa12.56□□□□□ -0.4
CCDC18-208ENST00000479653 DRP2Q13474 957 aa12.56□□□□□ -0.4
CCDC18-208ENST00000479653 LIN9Q5TKA1 542 aa12.56□□□□□ -0.4
CCDC18-208ENST00000479653 ZNF746Q6NUN9 644 aaPredicted RBP12.56□□□□□ -0.4
CCDC18-208ENST00000479653 MAMSTRQ6ZN01 415 aa12.56□□□□□ -0.4
CCDC18-208ENST00000479653 SMAP1Q8IYB5 467 aaPredicted RBP12.56□□□□□ -0.4
CCDC18-208ENST00000479653 MAP3K14Q99558 947 aa12.56□□□□□ -0.4
CCDC18-208ENST00000479653 LSM14BQ9BX40 385 aaKnown RBP12.56□□□□□ -0.4
CCDC18-208ENST00000479653 ANO3Q9BYT9 981 aa12.56□□□□□ -0.4
CCDC18-208ENST00000479653 PLA2G2FQ9BZM2 168 aa12.56□□□□□ -0.4
CCDC18-208ENST00000479653 ARRDC1-AS1Q9H2J1 176 aa12.56□□□□□ -0.4
CCDC18-208ENST00000479653 CHST7Q9NS84 486 aa12.56□□□□□ -0.4
CCDC18-208ENST00000479653 TBC1D22BQ9NU19 505 aa12.56□□□□□ -0.4
CCDC18-208ENST00000479653 NBEAQ8NFP9 2946 aa12.56□□□□□ -0.4
CCDC18-208ENST00000479653 FAM86B1E9PN63 330 aa12.55□□□□□ -0.4
CCDC18-208ENST00000479653 HIP1O00291 1037 aa12.55□□□□□ -0.4
CCDC18-208ENST00000479653 XYLBO75191 536 aa12.55□□□□□ -0.4
CCDC18-208ENST00000479653 DDAH1O94760 285 aa12.55□□□□□ -0.4
CCDC18-208ENST00000479653 FAM86B2P0C5J1 330 aa12.55□□□□□ -0.4
CCDC18-208ENST00000479653 RXRAP19793 462 aa12.55□□□□□ -0.4
CCDC18-208ENST00000479653 DNM2P50570 870 aa12.55□□□□□ -0.4
CCDC18-208ENST00000479653 CLCN6P51797 869 aa12.55□□□□□ -0.4
CCDC18-208ENST00000479653 USP41Q3LFD5 358 aa12.55□□□□□ -0.4
CCDC18-208ENST00000479653 NFXL1Q6ZNB6 911 aa12.55□□□□□ -0.4
CCDC18-208ENST00000479653 NIPA1Q7RTP0 329 aa12.55□□□□□ -0.4
CCDC18-208ENST00000479653 LONP2Q86WA8 852 aa12.55□□□□□ -0.4
CCDC18-208ENST00000479653 RHPN2Q8IUC4 686 aa12.55□□□□□ -0.4
CCDC18-208ENST00000479653 COLGALT2Q8IYK4 626 aa12.55□□□□□ -0.4
CCDC18-208ENST00000479653 RNF168Q8IYW5 571 aaPredicted RBP12.55□□□□□ -0.4
CCDC18-208ENST00000479653 NCOA7Q8NI08 942 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms