RNA–Protein interactions for RNA: ENST00000479169.5

HDLBP-237, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 1,017 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-237ENST00000479169 RNF149Q8NC42 400 aa12.31□□□□□ -0.44
HDLBP-237ENST00000479169 ST13P5Q8NFI4 369 aaPredicted RBP12.31□□□□□ -0.44
HDLBP-237ENST00000479169 PSPC1Q8WXF1 523 aaKnown RBP12.31□□□□□ -0.44
HDLBP-237ENST00000479169 SLC7A3Q8WY07 619 aa12.31□□□□□ -0.44
HDLBP-237ENST00000479169 RIN2Q8WYP3 895 aaPredicted RBP12.31□□□□□ -0.44
HDLBP-237ENST00000479169 SMG7Q92540 1137 aaKnown RBP12.31□□□□□ -0.44
HDLBP-237ENST00000479169 ZNF707Q96C28 371 aaPredicted RBP12.31□□□□□ -0.44
HDLBP-237ENST00000479169 CEP170P1Q96L14 293 aa12.31□□□□□ -0.44
HDLBP-237ENST00000479169 B3GALT6Q96L58 329 aa12.31□□□□□ -0.44
HDLBP-237ENST00000479169 GAD1Q99259 594 aa12.31□□□□□ -0.44
HDLBP-237ENST00000479169 LARP6Q9BRS8 491 aaKnown RBP12.31□□□□□ -0.44
HDLBP-237ENST00000479169 EIF2AQ9BY44 585 aaKnown RBP12.31□□□□□ -0.44
HDLBP-237ENST00000479169 C22orf23Q9BZE7 217 aa12.31□□□□□ -0.44
HDLBP-237ENST00000479169 RNF39Q9H2S5 420 aa12.31□□□□□ -0.44
HDLBP-237ENST00000479169 DHX33Q9H6R0 707 aaKnown RBP12.31□□□□□ -0.44
HDLBP-237ENST00000479169 TBC1D17Q9HA65 648 aa12.31□□□□□ -0.44
HDLBP-237ENST00000479169 KANSL3Q9P2N6 904 aa12.31□□□□□ -0.44
HDLBP-237ENST00000479169 STK39Q9UEW8 545 aa12.31□□□□□ -0.44
HDLBP-237ENST00000479169 HES2Q9Y543 173 aa12.31□□□□□ -0.44
HDLBP-237ENST00000479169 R4GN57 208 aa12.31□□□□□ -0.44
HDLBP-237ENST00000479169 COL4A3Q01955 1670 aa12.3□□□□□ -0.44
HDLBP-237ENST00000479169 ARL5CA6NH57 179 aa12.3□□□□□ -0.44
HDLBP-237ENST00000479169 ITGA4P13612 1032 aa12.3□□□□□ -0.44
HDLBP-237ENST00000479169 RFX1P22670 979 aa12.3□□□□□ -0.44
HDLBP-237ENST00000479169 MLH1P40692 756 aa12.3□□□□□ -0.44
HDLBP-237ENST00000479169 GLUD2P49448 558 aa12.3□□□□□ -0.44
HDLBP-237ENST00000479169 SCNN1GP51170 649 aa12.3□□□□□ -0.44
HDLBP-237ENST00000479169 SSRP1Q08945 709 aaKnown RBP12.3□□□□□ -0.44
HDLBP-237ENST00000479169 PPP2R5CQ13362 524 aa12.3□□□□□ -0.44
HDLBP-237ENST00000479169 EMC2Q15006 297 aa12.3□□□□□ -0.44
HDLBP-237ENST00000479169 KIAA0319Q5VV43 1072 aa12.3□□□□□ -0.44
HDLBP-237ENST00000479169 MOXD1Q6UVY6 613 aa12.3□□□□□ -0.44
HDLBP-237ENST00000479169 ERMP1Q7Z2K6 904 aa12.3□□□□□ -0.44
HDLBP-237ENST00000479169 GLYCTKQ8IVS8 523 aa12.3□□□□□ -0.44
HDLBP-237ENST00000479169 TRIM22Q8IYM9 498 aa12.3□□□□□ -0.44
HDLBP-237ENST00000479169 RNF168Q8IYW5 571 aaPredicted RBP12.3□□□□□ -0.44
HDLBP-237ENST00000479169 SLC44A3Q8N4M1 653 aa12.3□□□□□ -0.44
HDLBP-237ENST00000479169 KCNG4Q8TDN1 519 aa12.3□□□□□ -0.44
HDLBP-237ENST00000479169 CPB2Q96IY4 423 aa12.3□□□□□ -0.44
HDLBP-237ENST00000479169 ZFP42Q96MM3 310 aa12.3□□□□□ -0.44
HDLBP-237ENST00000479169 APOL6Q9BWW8 343 aa12.3□□□□□ -0.44
HDLBP-237ENST00000479169 SLKQ9H2G2 1235 aaPredicted RBP12.3□□□□□ -0.44
HDLBP-237ENST00000479169 MIOSQ9NXC5 875 aa12.3□□□□□ -0.44
HDLBP-237ENST00000479169 EPS15L1Q9UBC2 864 aa12.3□□□□□ -0.44
HDLBP-237ENST00000479169 WNT16Q9UBV4 365 aa12.3□□□□□ -0.44
HDLBP-237ENST00000479169 IPPQ9Y573 584 aa12.3□□□□□ -0.44
HDLBP-237ENST00000479169 SPTBN2O15020 2390 aa12.3□□□□□ -0.44
HDLBP-237ENST00000479169 NCOR2Q9Y618 2525 aa12.29□□□□□ -0.44
HDLBP-237ENST00000479169 ZBTB39O15060 712 aa12.29□□□□□ -0.44
HDLBP-237ENST00000479169 TSPAN1O60635 241 aa12.29□□□□□ -0.44
HDLBP-237ENST00000479169 ERLIN2O94905 339 aa12.29□□□□□ -0.44
HDLBP-237ENST00000479169 EFEMP2O95967 443 aa12.29□□□□□ -0.44
HDLBP-237ENST00000479169 DCNP07585 359 aaKnown RBP12.29□□□□□ -0.44
HDLBP-237ENST00000479169 EVCP57679 992 aa12.29□□□□□ -0.44
HDLBP-237ENST00000479169 DSC1Q08554 894 aa12.29□□□□□ -0.44
HDLBP-237ENST00000479169 TOB2Q14106 344 aaPredicted RBP12.29□□□□□ -0.44
HDLBP-237ENST00000479169 NONOQ15233 471 aaKnown RBP eCLIP12.29□□□□□ -0.44
HDLBP-237ENST00000479169 SPECC1Q5M775 1068 aa12.29□□□□□ -0.44
HDLBP-237ENST00000479169 POTEGQ6S5H5 508 aa12.29□□□□□ -0.44
HDLBP-237ENST00000479169 GET4Q7L5D6 327 aaPredicted RBP12.29□□□□□ -0.44
HDLBP-237ENST00000479169 FERMT3Q86UX7 667 aa12.29□□□□□ -0.44
HDLBP-237ENST00000479169 PALB2Q86YC2 1186 aa12.29□□□□□ -0.44
HDLBP-237ENST00000479169 DAGLBQ8NCG7 672 aa12.29□□□□□ -0.44
HDLBP-237ENST00000479169 GPR152Q8TDT2 470 aa12.29□□□□□ -0.44
HDLBP-237ENST00000479169 RABGGTAQ92696 567 aa12.29□□□□□ -0.44
HDLBP-237ENST00000479169 STAMQ92783 540 aa12.29□□□□□ -0.44
HDLBP-237ENST00000479169 LXNQ9BS40 222 aa12.29□□□□□ -0.44
HDLBP-237ENST00000479169 RXFP1Q9HBX9 757 aa12.29□□□□□ -0.44
HDLBP-237ENST00000479169 KCNMB3Q9NPA1 279 aa12.29□□□□□ -0.44
HDLBP-237ENST00000479169 RGL1Q9NZL6 768 aa12.29□□□□□ -0.44
HDLBP-237ENST00000479169 CACNG4Q9UBN1 327 aa12.29□□□□□ -0.44
HDLBP-237ENST00000479169 KCNJ14Q9UNX9 436 aa12.29□□□□□ -0.44
HDLBP-237ENST00000479169 VWA8A3KMH1 1905 aa12.29□□□□□ -0.44
HDLBP-237ENST00000479169 TRIP11Q15643 1979 aa12.29□□□□□ -0.44
HDLBP-237ENST00000479169 TGM5O43548 720 aa12.28□□□□□ -0.44
HDLBP-237ENST00000479169 DTNBO60941 627 aa12.28□□□□□ -0.44
HDLBP-237ENST00000479169 DEXIO95424 95 aa12.28□□□□□ -0.44
HDLBP-237ENST00000479169 LMNAP02545 664 aaKnown RBP12.28□□□□□ -0.44
HDLBP-237ENST00000479169 P4HBP07237 508 aaKnown RBP12.28□□□□□ -0.44
HDLBP-237ENST00000479169 SRFP11831 508 aa12.28□□□□□ -0.44
HDLBP-237ENST00000479169 RPL17P18621 184 aaKnown RBP12.28□□□□□ -0.44
HDLBP-237ENST00000479169 RFC5P40937 340 aa12.28□□□□□ -0.44
HDLBP-237ENST00000479169 DSG1Q02413 1049 aa12.28□□□□□ -0.44
HDLBP-237ENST00000479169 KRT25Q7Z3Z0 450 aa12.28□□□□□ -0.44
HDLBP-237ENST00000479169 RHOBTB2Q9BYZ6 727 aa12.28□□□□□ -0.44
HDLBP-237ENST00000479169 GPR62Q9BZJ7 368 aa12.28□□□□□ -0.44
HDLBP-237ENST00000479169 NT5C3AQ9H0P0 336 aa12.28□□□□□ -0.44
HDLBP-237ENST00000479169 NXF3Q9H4D5 531 aaKnown RBP12.28□□□□□ -0.44
HDLBP-237ENST00000479169 PIDD1Q9HB75 910 aa12.28□□□□□ -0.44
HDLBP-237ENST00000479169 SSX2IPQ9Y2D8 614 aa12.28□□□□□ -0.44
HDLBP-237ENST00000479169 NOTCH4Q99466 2003 aa12.28□□□□□ -0.44
HDLBP-237ENST00000479169 PATJQ8NI35 1801 aa12.27□□□□□ -0.44
HDLBP-237ENST00000479169 TPRP12270 2363 aaKnown RBP12.27□□□□□ -0.44
HDLBP-237ENST00000479169 CPLX1O14810 134 aa12.27□□□□□ -0.45
HDLBP-237ENST00000479169 GAS2O43903 313 aaKnown RBP12.27□□□□□ -0.45
HDLBP-237ENST00000479169 DKC1O60832 514 aaKnown RBP eCLIP12.27□□□□□ -0.45
HDLBP-237ENST00000479169 PSMA5P28066 241 aa12.27□□□□□ -0.45
HDLBP-237ENST00000479169 YWHABP31946 246 aaKnown RBP12.27□□□□□ -0.45
HDLBP-237ENST00000479169 CYP4A11Q02928 519 aa12.27□□□□□ -0.45
HDLBP-237ENST00000479169 STK3Q13188 491 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms