RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 AGMOQ6ZNB7 445 aa17.03■□□□□ 0.32
C9orf3-217ENST00000479161 SMG8Q8ND04 991 aaKnown RBP17.03■□□□□ 0.32
C9orf3-217ENST00000479161 ADPGKQ9BRR6 497 aa17.03■□□□□ 0.32
C9orf3-217ENST00000479161 MRPL4Q9BYD3 311 aaKnown RBP17.03■□□□□ 0.32
C9orf3-217ENST00000479161 CWH43Q9H720 699 aa17.03■□□□□ 0.32
C9orf3-217ENST00000479161 KBTBD4Q9NVX7 518 aa17.03■□□□□ 0.32
C9orf3-217ENST00000479161 FAM13BQ9NYF5 915 aa17.03■□□□□ 0.32
C9orf3-217ENST00000479161 IPPQ9Y573 584 aa17.03■□□□□ 0.32
C9orf3-217ENST00000479161 A0A087X0B3 334 aa17.02■□□□□ 0.32
C9orf3-217ENST00000479161 FRMD3A2A2Y4 597 aa17.02■□□□□ 0.32
C9orf3-217ENST00000479161 EPOPA6NHQ4 379 aa17.02■□□□□ 0.32
C9orf3-217ENST00000479161 B4GALT5O43286 388 aa17.02■□□□□ 0.32
C9orf3-217ENST00000479161 GAP43P17677 238 aa17.02■□□□□ 0.32
C9orf3-217ENST00000479161 AMPD3Q01432 767 aa17.02■□□□□ 0.32
C9orf3-217ENST00000479161 PTPROQ16827 1216 aa17.02■□□□□ 0.32
C9orf3-217ENST00000479161 DCAF4L1Q3SXM0 396 aa17.02■□□□□ 0.32
C9orf3-217ENST00000479161 NOMO2Q5JPE7 1267 aa17.02■□□□□ 0.32
C9orf3-217ENST00000479161 DDX12PQ92771 950 aa17.02■□□□□ 0.32
C9orf3-217ENST00000479161 DNAJC19Q96DA6 116 aa17.02■□□□□ 0.32
C9orf3-217ENST00000479161 CPB2Q96IY4 423 aa17.02■□□□□ 0.32
C9orf3-217ENST00000479161 SPATA32Q96LK8 384 aa17.02■□□□□ 0.32
C9orf3-217ENST00000479161 ACO2Q99798 780 aaKnown RBP17.02■□□□□ 0.32
C9orf3-217ENST00000479161 TRIM6Q9C030 488 aaPredicted RBP17.02■□□□□ 0.32
C9orf3-217ENST00000479161 PDZD7Q9H5P4 517 aa17.02■□□□□ 0.32
C9orf3-217ENST00000479161 RSAD1Q9HA92 442 aa17.02■□□□□ 0.32
C9orf3-217ENST00000479161 PTPRHQ9HD43 1115 aa17.02■□□□□ 0.32
C9orf3-217ENST00000479161 TYW1Q9NV66 732 aaKnown RBP17.02■□□□□ 0.32
C9orf3-217ENST00000479161 USP25Q9UHP3 1055 aa17.02■□□□□ 0.32
C9orf3-217ENST00000479161 LZTS1Q9Y250 596 aa17.02■□□□□ 0.32
C9orf3-217ENST00000479161 PCDHB12Q9Y5F1 795 aa17.02■□□□□ 0.32
C9orf3-217ENST00000479161 MTCH2Q9Y6C9 303 aa17.02■□□□□ 0.32
C9orf3-217ENST00000479161 MYO7AQ13402 2215 aa17.01■□□□□ 0.31
C9orf3-217ENST00000479161 COL4A4P53420 1690 aaPredicted RBP17.01■□□□□ 0.31
C9orf3-217ENST00000479161 MYMKA6NI61 221 aa17.01■□□□□ 0.31
C9orf3-217ENST00000479161 SFI1A8K8P3 1242 aa17.01■□□□□ 0.31
C9orf3-217ENST00000479161 TRAK2O60296 914 aa17.01■□□□□ 0.31
C9orf3-217ENST00000479161 TBCAO75347 108 aaKnown RBP17.01■□□□□ 0.31
C9orf3-217ENST00000479161 FAM13AO94988 1023 aa17.01■□□□□ 0.31
C9orf3-217ENST00000479161 KRT18P05783 430 aaKnown RBP17.01■□□□□ 0.31
C9orf3-217ENST00000479161 ITGA4P13612 1032 aa17.01■□□□□ 0.31
C9orf3-217ENST00000479161 PROZP22891 400 aa17.01■□□□□ 0.31
C9orf3-217ENST00000479161 CTNNB1P35222 781 aa17.01■□□□□ 0.31
C9orf3-217ENST00000479161 PPM1AP35813 382 aa17.01■□□□□ 0.31
C9orf3-217ENST00000479161 STRN3Q13033 797 aa17.01■□□□□ 0.31
C9orf3-217ENST00000479161 NT5DC1Q5TFE4 455 aa17.01■□□□□ 0.31
C9orf3-217ENST00000479161 ATF7IP2Q5U623 682 aa17.01■□□□□ 0.31
C9orf3-217ENST00000479161 LRRC55Q6ZSA7 311 aa17.01■□□□□ 0.31
C9orf3-217ENST00000479161 TAS1R3Q7RTX0 852 aa17.01■□□□□ 0.31
C9orf3-217ENST00000479161 SPRED2Q7Z698 418 aa17.01■□□□□ 0.31
C9orf3-217ENST00000479161 HVCN1Q96D96 273 aa17.01■□□□□ 0.31
C9orf3-217ENST00000479161 MRPL38Q96DV4 380 aaKnown RBP17.01■□□□□ 0.31
C9orf3-217ENST00000479161 FIZ1Q96SL8 496 aa17.01■□□□□ 0.31
C9orf3-217ENST00000479161 EIF2AQ9BY44 585 aaKnown RBP17.01■□□□□ 0.31
C9orf3-217ENST00000479161 CERS4Q9HA82 394 aa17.01■□□□□ 0.31
C9orf3-217ENST00000479161 POLD4Q9HCU8 107 aa17.01■□□□□ 0.31
C9orf3-217ENST00000479161 OLFML3Q9NRN5 406 aa17.01■□□□□ 0.31
C9orf3-217ENST00000479161 STK39Q9UEW8 545 aa17.01■□□□□ 0.31
C9orf3-217ENST00000479161 PLAGL2Q9UPG8 496 aa17.01■□□□□ 0.31
C9orf3-217ENST00000479161 TDRD15B5MCY1 1934 aaKnown RBP17.01■□□□□ 0.31
C9orf3-217ENST00000479161 NPHP3-ACAD11A0A0J9YXS1 232 aa17■□□□□ 0.31
C9orf3-217ENST00000479161 A0A1W2PQ27 194 aa17■□□□□ 0.31
C9orf3-217ENST00000479161 A0A1W2PQ64 194 aa17■□□□□ 0.31
C9orf3-217ENST00000479161 A0A1W2PQD8 194 aa17■□□□□ 0.31
C9orf3-217ENST00000479161 SLC16A4O15374 487 aa17■□□□□ 0.31
C9orf3-217ENST00000479161 PIGRP01833 764 aa17■□□□□ 0.31
C9orf3-217ENST00000479161 GATMP50440 423 aa17■□□□□ 0.31
C9orf3-217ENST00000479161 GTF2BQ00403 316 aa17■□□□□ 0.31
C9orf3-217ENST00000479161 PLCB3Q01970 1234 aa17■□□□□ 0.31
C9orf3-217ENST00000479161 RAD51AP2Q09MP3 1159 aa17■□□□□ 0.31
C9orf3-217ENST00000479161 GPM6BQ13491 265 aa17■□□□□ 0.31
C9orf3-217ENST00000479161 DHX8Q14562 1220 aaKnown RBP17■□□□□ 0.31
C9orf3-217ENST00000479161 FOXD4L6Q3SYB3 417 aaPredicted RBP17■□□□□ 0.31
C9orf3-217ENST00000479161 PAN2Q504Q3 1202 aaKnown RBP17■□□□□ 0.31
C9orf3-217ENST00000479161 FOXD4L3Q6VB84 417 aaPredicted RBP17■□□□□ 0.31
C9orf3-217ENST00000479161 HAUS6Q7Z4H7 955 aa17■□□□□ 0.31
C9orf3-217ENST00000479161 MYCT1Q8N699 235 aa17■□□□□ 0.31
C9orf3-217ENST00000479161 RNF169Q8NCN4 708 aa17■□□□□ 0.31
C9orf3-217ENST00000479161 URGCPQ8TCY9 931 aa17■□□□□ 0.31
C9orf3-217ENST00000479161 HELQQ8TDG4 1101 aa17■□□□□ 0.31
C9orf3-217ENST00000479161 KIFC3Q9BVG8 833 aa17■□□□□ 0.31
C9orf3-217ENST00000479161 CITO14578 2027 aa16.99■□□□□ 0.31
C9orf3-217ENST00000479161 TTLL13PA6NNM8 815 aa16.99■□□□□ 0.31
C9orf3-217ENST00000479161 TOM1L1O75674 476 aa16.99■□□□□ 0.31
C9orf3-217ENST00000479161 EDN1P05305 212 aa16.99■□□□□ 0.31
C9orf3-217ENST00000479161 ANP32AP39687 249 aaKnown RBP16.99■□□□□ 0.31
C9orf3-217ENST00000479161 ALCAMQ13740 583 aa16.99■□□□□ 0.31
C9orf3-217ENST00000479161 PDE12Q6L8Q7 609 aaKnown RBP16.99■□□□□ 0.31
C9orf3-217ENST00000479161 KCNT2Q6UVM3 1135 aa16.99■□□□□ 0.31
C9orf3-217ENST00000479161 FAM178BQ8IXR5 827 aa16.99■□□□□ 0.31
C9orf3-217ENST00000479161 PDILTQ8N807 584 aa16.99■□□□□ 0.31
C9orf3-217ENST00000479161 COLGALT1Q8NBJ5 622 aa16.99■□□□□ 0.31
C9orf3-217ENST00000479161 MAFAQ8NHW3 353 aaPredicted RBP16.99■□□□□ 0.31
C9orf3-217ENST00000479161 LPPQ93052 612 aa16.99■□□□□ 0.31
C9orf3-217ENST00000479161 TMEM175Q9BSA9 504 aa16.99■□□□□ 0.31
C9orf3-217ENST00000479161 STRA6Q9BX79 667 aa16.99■□□□□ 0.31
C9orf3-217ENST00000479161 TBC1D13Q9NVG8 400 aa16.99■□□□□ 0.31
C9orf3-217ENST00000479161 KCNH3Q9ULD8 1083 aa16.99■□□□□ 0.31
C9orf3-217ENST00000479161 HPSEQ9Y251 543 aa16.99■□□□□ 0.31
C9orf3-217ENST00000479161 TRIP11Q15643 1979 aa16.98■□□□□ 0.31
C9orf3-217ENST00000479161 VCANP13611 3396 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms