RNA–Protein interactions for RNA: ENST00000479113.1

RPN1-203, Transcript of ribophorin I, humanhuman

TSL 4

Gene RPN1, Length 558 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPN1-203ENST00000479113 CCSER2Q9H7U1 834 aa4.84□□□□□ -1.63
RPN1-203ENST00000479113 VAT1LQ9HCJ6 419 aa4.84□□□□□ -1.63
RPN1-203ENST00000479113 CTNNA3Q9UI47 895 aa4.84□□□□□ -1.63
RPN1-203ENST00000479113 PPT2Q9UMR5 302 aa4.84□□□□□ -1.63
RPN1-203ENST00000479113 ADAMTS5Q9UNA0 930 aa4.84□□□□□ -1.63
RPN1-203ENST00000479113 CEP131Q9UPN4 1083 aa4.84□□□□□ -1.63
RPN1-203ENST00000479113 EFR3BQ9Y2G0 817 aa4.84□□□□□ -1.63
RPN1-203ENST00000479113 MYH8P13535 1937 aa4.84□□□□□ -1.64
RPN1-203ENST00000479113 LOC285556D6RIA3 1793 aa4.83□□□□□ -1.64
RPN1-203ENST00000479113 CEP290O15078 2479 aa4.83□□□□□ -1.64
RPN1-203ENST00000479113 ROBO3Q96MS0 1386 aa4.83□□□□□ -1.64
RPN1-203ENST00000479113 CCDC171Q6TFL3 1326 aa4.83□□□□□ -1.64
RPN1-203ENST00000479113 IGKV6D-41A0A0C4DH26 115 aa4.83□□□□□ -1.64
RPN1-203ENST00000479113 A0A0D9SFI3 127 aa4.83□□□□□ -1.64
RPN1-203ENST00000479113 TRIM43BA6NCK2 446 aa4.83□□□□□ -1.64
RPN1-203ENST00000479113 ATP2A1O14983 1001 aa4.83□□□□□ -1.64
RPN1-203ENST00000479113 SNAI1O95863 264 aaPredicted RBP4.83□□□□□ -1.64
RPN1-203ENST00000479113 ICAM1P05362 532 aa4.83□□□□□ -1.64
RPN1-203ENST00000479113 MYL3P08590 195 aa4.83□□□□□ -1.64
RPN1-203ENST00000479113 GOLGA8HP0CJ92 632 aa4.83□□□□□ -1.64
RPN1-203ENST00000479113 HSPD1P10809 573 aaKnown RBP4.83□□□□□ -1.64
RPN1-203ENST00000479113 PCP11498 1178 aaKnown RBP4.83□□□□□ -1.64
RPN1-203ENST00000479113 SDSP20132 328 aa4.83□□□□□ -1.64
RPN1-203ENST00000479113 BEX3Q00994 111 aa4.83□□□□□ -1.64
RPN1-203ENST00000479113 BAATQ14032 418 aaPredicted RBP4.83□□□□□ -1.64
RPN1-203ENST00000479113 SART3Q15020 963 aaKnown RBP4.83□□□□□ -1.64
RPN1-203ENST00000479113 SHHQ15465 462 aa4.83□□□□□ -1.64
RPN1-203ENST00000479113 FSCN1Q16658 493 aaKnown RBP4.83□□□□□ -1.64
RPN1-203ENST00000479113 NKPD1Q17RQ9 610 aa4.83□□□□□ -1.64
RPN1-203ENST00000479113 CCDC178Q5BJE1 867 aa4.83□□□□□ -1.64
RPN1-203ENST00000479113 ARSHQ5FYA8 562 aa4.83□□□□□ -1.64
RPN1-203ENST00000479113 AKNAD1Q5T1N1 836 aa4.83□□□□□ -1.64
RPN1-203ENST00000479113 GPATCH4Q5T3I0 446 aaKnown RBP4.83□□□□□ -1.64
RPN1-203ENST00000479113 OVOS1Q6IE37 1185 aa4.83□□□□□ -1.64
RPN1-203ENST00000479113 NFXL1Q6ZNB6 911 aa4.83□□□□□ -1.64
RPN1-203ENST00000479113 RNF207Q6ZRF8 634 aa4.83□□□□□ -1.64
RPN1-203ENST00000479113 CHST3Q7LGC8 479 aa4.83□□□□□ -1.64
RPN1-203ENST00000479113 RALYLQ86SE5 291 aaKnown RBP4.83□□□□□ -1.64
RPN1-203ENST00000479113 TLK2Q86UE8 772 aa4.83□□□□□ -1.64
RPN1-203ENST00000479113 FBXO16Q8IX29 292 aaPredicted RBP4.83□□□□□ -1.64
RPN1-203ENST00000479113 REPS2Q8NFH8 660 aa4.83□□□□□ -1.64
RPN1-203ENST00000479113 OR6J1Q8NGC5 347 aa4.83□□□□□ -1.64
RPN1-203ENST00000479113 RUFY2Q8WXA3 655 aa4.83□□□□□ -1.64
RPN1-203ENST00000479113 PPM1EQ8WY54 764 aa4.83□□□□□ -1.64
RPN1-203ENST00000479113 TRIM43Q96BQ3 446 aaPredicted RBP4.83□□□□□ -1.64
RPN1-203ENST00000479113 KIF2CQ99661 725 aa4.83□□□□□ -1.64
RPN1-203ENST00000479113 PRO3102Q9H379 93 aa4.83□□□□□ -1.64
RPN1-203ENST00000479113 CNNM2Q9H8M5 875 aa4.83□□□□□ -1.64
RPN1-203ENST00000479113 A1CFQ9NQ94 594 aaKnown RBP4.83□□□□□ -1.64
RPN1-203ENST00000479113 PDLIM7Q9NR12 457 aa4.83□□□□□ -1.64
RPN1-203ENST00000479113 GMIPQ9P107 970 aa4.83□□□□□ -1.64
RPN1-203ENST00000479113 GTF2IRD1Q9UHL9 959 aa4.83□□□□□ -1.64
RPN1-203ENST00000479113 PNMA2Q9UL42 364 aa4.83□□□□□ -1.64
RPN1-203ENST00000479113 TPX2Q9ULW0 747 aaKnown RBP4.83□□□□□ -1.64
RPN1-203ENST00000479113 SIPA1L1O43166 1804 aa4.83□□□□□ -1.64
RPN1-203ENST00000479113 ELP1O95163 1332 aa4.82□□□□□ -1.64
RPN1-203ENST00000479113 KRTAP4-8A0A0G2JLE6 195 aa4.82□□□□□ -1.64
RPN1-203ENST00000479113 ORC4O43929 436 aa4.82□□□□□ -1.64
RPN1-203ENST00000479113 CABYRO75952 493 aa4.82□□□□□ -1.64
RPN1-203ENST00000479113 TIMP1P01033 207 aa4.82□□□□□ -1.64
RPN1-203ENST00000479113 PARP1P09874 1014 aaKnown RBP4.82□□□□□ -1.64
RPN1-203ENST00000479113 ACRP10323 421 aa4.82□□□□□ -1.64
RPN1-203ENST00000479113 FOSL2P15408 326 aa4.82□□□□□ -1.64
RPN1-203ENST00000479113 ITIH2P19823 946 aa4.82□□□□□ -1.64
RPN1-203ENST00000479113 POLR2BP30876 1174 aaKnown RBP4.82□□□□□ -1.64
RPN1-203ENST00000479113 SOX9P48436 509 aa4.82□□□□□ -1.64
RPN1-203ENST00000479113 CPT1AP50416 773 aa4.82□□□□□ -1.64
RPN1-203ENST00000479113 CCL23P55773 120 aa4.82□□□□□ -1.64
RPN1-203ENST00000479113 NUCB1Q02818 461 aa4.82□□□□□ -1.64
RPN1-203ENST00000479113 PPIGQ13427 754 aaKnown RBP eCLIP4.82□□□□□ -1.64
RPN1-203ENST00000479113 ITGA7Q13683 1181 aa4.82□□□□□ -1.64
RPN1-203ENST00000479113 PPP2R5BQ15173 497 aa4.82□□□□□ -1.64
RPN1-203ENST00000479113 ALX1Q15699 326 aa4.82□□□□□ -1.64
RPN1-203ENST00000479113 MUM1L1Q5H9M0 696 aa4.82□□□□□ -1.64
RPN1-203ENST00000479113 C9orf50Q5SZB4 431 aa4.82□□□□□ -1.64
RPN1-203ENST00000479113 IFIT1BQ5T764 474 aaKnown RBP4.82□□□□□ -1.64
RPN1-203ENST00000479113 CDCP2Q5VXM1 449 aa4.82□□□□□ -1.64
RPN1-203ENST00000479113 IQSEC1Q6DN90 963 aa4.82□□□□□ -1.64
RPN1-203ENST00000479113 CXCL17Q6UXB2 119 aa4.82□□□□□ -1.64
RPN1-203ENST00000479113 MAMDC4Q6UXC1 1216 aa4.82□□□□□ -1.64
RPN1-203ENST00000479113 ZNF589Q86UQ0 364 aaPredicted RBP4.82□□□□□ -1.64
RPN1-203ENST00000479113 MCF2L2Q86YR7 1114 aa4.82□□□□□ -1.64
RPN1-203ENST00000479113 TMEM40Q8WWA1 233 aa4.82□□□□□ -1.64
RPN1-203ENST00000479113 CCDC74BQ96LY2 380 aa4.82□□□□□ -1.64
RPN1-203ENST00000479113 TTC14Q96N46 770 aa4.82□□□□□ -1.64
RPN1-203ENST00000479113 WDR11Q9BZH6 1224 aa4.82□□□□□ -1.64
RPN1-203ENST00000479113 KRT23Q9C075 422 aa4.82□□□□□ -1.64
RPN1-203ENST00000479113 FTOQ9C0B1 505 aaKnown RBP eCLIP4.82□□□□□ -1.64
RPN1-203ENST00000479113 UBA5Q9GZZ9 404 aa4.82□□□□□ -1.64
RPN1-203ENST00000479113 HIPK3Q9H422 1215 aa4.82□□□□□ -1.64
RPN1-203ENST00000479113 VTA1Q9NP79 307 aa4.82□□□□□ -1.64
RPN1-203ENST00000479113 IL17RBQ9NRM6 502 aa4.82□□□□□ -1.64
RPN1-203ENST00000479113 CYP39A1Q9NYL5 469 aa4.82□□□□□ -1.64
RPN1-203ENST00000479113 MSRAQ9UJ68 235 aa4.82□□□□□ -1.64
RPN1-203ENST00000479113 ANAPC4Q9UJX5 808 aa4.82□□□□□ -1.64
RPN1-203ENST00000479113 MAPK8IP1Q9UQF2 711 aa4.82□□□□□ -1.64
RPN1-203ENST00000479113 INPP5FQ9Y2H2 1132 aa4.82□□□□□ -1.64
RPN1-203ENST00000479113 STXBP5LQ9Y2K9 1186 aa4.82□□□□□ -1.64
RPN1-203ENST00000479113 DNAH12Q6ZR08 3092 aa4.81□□□□□ -1.64
RPN1-203ENST00000479113 DNAJC25-GNG10A0A024R161 153 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 140 ms