RNA–Protein interactions for RNA: ENST00000478743.1

HDAC8-217, Transcript of histone deacetylase 8, humanhuman

TSL 4

Gene HDAC8, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-217ENST00000478743 RBM12Q9NTZ6 932 aaKnown RBP13.9□□□□□ -0.18
HDAC8-217ENST00000478743 FAM105AQ9NUU6 356 aa13.9□□□□□ -0.18
HDAC8-217ENST00000478743 KLK13Q9UKR3 277 aa13.9□□□□□ -0.18
HDAC8-217ENST00000478743 FAN1Q9Y2M0 1017 aa13.9□□□□□ -0.18
HDAC8-217ENST00000478743 TDRD15B5MCY1 1934 aaKnown RBP13.9□□□□□ -0.18
HDAC8-217ENST00000478743 CCL16O15467 120 aa13.89□□□□□ -0.19
HDAC8-217ENST00000478743 POMCP01189 267 aa13.89□□□□□ -0.19
HDAC8-217ENST00000478743 CXCL12P48061 93 aa13.89□□□□□ -0.19
HDAC8-217ENST00000478743 DSG1Q02413 1049 aa13.89□□□□□ -0.19
HDAC8-217ENST00000478743 TRAF1Q13077 416 aa13.89□□□□□ -0.19
HDAC8-217ENST00000478743 TWF2Q6IBS0 349 aaKnown RBP13.89□□□□□ -0.19
HDAC8-217ENST00000478743 SWSAP1Q6NVH7 229 aa13.89□□□□□ -0.19
HDAC8-217ENST00000478743 KBTBD6Q86V97 674 aa13.89□□□□□ -0.19
HDAC8-217ENST00000478743 HDAC7Q8WUI4 952 aa13.89□□□□□ -0.19
HDAC8-217ENST00000478743 PLEKHA4Q9H4M7 779 aa13.89□□□□□ -0.19
HDAC8-217ENST00000478743 DACT1Q9NYF0 836 aa13.89□□□□□ -0.19
HDAC8-217ENST00000478743 PCDHA6Q9UN73 950 aa13.89□□□□□ -0.19
HDAC8-217ENST00000478743 MRPS17Q9Y2R5 130 aaKnown RBP13.89□□□□□ -0.19
HDAC8-217ENST00000478743 PCDHA8Q9Y5H6 950 aa13.89□□□□□ -0.19
HDAC8-217ENST00000478743 NCANO14594 1321 aa13.89□□□□□ -0.19
HDAC8-217ENST00000478743 CAPNS1P04632 268 aa13.88□□□□□ -0.19
HDAC8-217ENST00000478743 CHRNB1P11230 501 aa13.88□□□□□ -0.19
HDAC8-217ENST00000478743 FCARP24071 287 aa13.88□□□□□ -0.19
HDAC8-217ENST00000478743 C20orf194Q5TEA3 1177 aa13.88□□□□□ -0.19
HDAC8-217ENST00000478743 FAM160B1Q5W0V3 765 aa13.88□□□□□ -0.19
HDAC8-217ENST00000478743 TANGO2Q6ICL3 276 aa13.88□□□□□ -0.19
HDAC8-217ENST00000478743 ELMSAN1Q6PJG2 1045 aa13.88□□□□□ -0.19
HDAC8-217ENST00000478743 EVI5LQ96CN4 794 aa13.88□□□□□ -0.19
HDAC8-217ENST00000478743 KIF12Q96FN5 646 aa13.88□□□□□ -0.19
HDAC8-217ENST00000478743 MBOAT7Q96N66 472 aa13.88□□□□□ -0.19
HDAC8-217ENST00000478743 SCLT1Q96NL6 688 aa13.88□□□□□ -0.19
HDAC8-217ENST00000478743 DPP7Q9UHL4 492 aa13.88□□□□□ -0.19
HDAC8-217ENST00000478743 FBXW11Q9UKB1 542 aa13.88□□□□□ -0.19
HDAC8-217ENST00000478743 PIN4Q9Y237 131 aaKnown RBP13.88□□□□□ -0.19
HDAC8-217ENST00000478743 C4orf47A7E2U8 309 aa13.87□□□□□ -0.19
HDAC8-217ENST00000478743 PRB1P04280 392 aa13.87□□□□□ -0.19
HDAC8-217ENST00000478743 RAP1GAPP47736 663 aa13.87□□□□□ -0.19
HDAC8-217ENST00000478743 TROAPQ12815 778 aa13.87□□□□□ -0.19
HDAC8-217ENST00000478743 PPP2R5DQ14738 602 aa13.87□□□□□ -0.19
HDAC8-217ENST00000478743 SLC5A9Q2M3M2 681 aa13.87□□□□□ -0.19
HDAC8-217ENST00000478743 PRSS55Q6UWB4 352 aaPredicted RBP13.87□□□□□ -0.19
HDAC8-217ENST00000478743 CKAP2LQ8IYA6 745 aa13.87□□□□□ -0.19
HDAC8-217ENST00000478743 COLGALT2Q8IYK4 626 aa13.87□□□□□ -0.19
HDAC8-217ENST00000478743 NLRP7Q8WX94 980 aa13.87□□□□□ -0.19
HDAC8-217ENST00000478743 MCRS1Q96EZ8 462 aa13.87□□□□□ -0.19
HDAC8-217ENST00000478743 MAP7D2Q96T17 732 aa13.87□□□□□ -0.19
HDAC8-217ENST00000478743 TMEM175Q9BSA9 504 aa13.87□□□□□ -0.19
HDAC8-217ENST00000478743 EDEM2Q9BV94 578 aa13.87□□□□□ -0.19
HDAC8-217ENST00000478743 TRAIPQ9BWF2 469 aa13.87□□□□□ -0.19
HDAC8-217ENST00000478743 GPR62Q9BZJ7 368 aa13.87□□□□□ -0.19
HDAC8-217ENST00000478743 CHST7Q9NS84 486 aa13.87□□□□□ -0.19
HDAC8-217ENST00000478743 CACNA2D2Q9NY47 1150 aa13.87□□□□□ -0.19
HDAC8-217ENST00000478743 POLIQ9UNA4 740 aa13.87□□□□□ -0.19
HDAC8-217ENST00000478743 hCG_1642624A0A1W2PR95 340 aa13.86□□□□□ -0.19
HDAC8-217ENST00000478743 MAFGO15525 162 aa13.86□□□□□ -0.19
HDAC8-217ENST00000478743 ECI2O75521 394 aa13.86□□□□□ -0.19
HDAC8-217ENST00000478743 ALDH2P05091 517 aa13.86□□□□□ -0.19
HDAC8-217ENST00000478743 MPLP40238 635 aa13.86□□□□□ -0.19
HDAC8-217ENST00000478743 OR1G1P47890 313 aa13.86□□□□□ -0.19
HDAC8-217ENST00000478743 PXNP49023 591 aaPredicted RBP13.86□□□□□ -0.19
HDAC8-217ENST00000478743 PROSER1Q86XN7 944 aa13.86□□□□□ -0.19
HDAC8-217ENST00000478743 LURAP1LQ8IV03 231 aa13.86□□□□□ -0.19
HDAC8-217ENST00000478743 FAM3CQ92520 227 aa13.86□□□□□ -0.19
HDAC8-217ENST00000478743 RABGGTAQ92696 567 aa13.86□□□□□ -0.19
HDAC8-217ENST00000478743 CACNG4Q9UBN1 327 aa13.86□□□□□ -0.19
HDAC8-217ENST00000478743 VWA8A3KMH1 1905 aa13.86□□□□□ -0.19
HDAC8-217ENST00000478743 CARNS1A5YM72 827 aa13.85□□□□□ -0.19
HDAC8-217ENST00000478743 DHX15O43143 795 aaKnown RBP13.85□□□□□ -0.19
HDAC8-217ENST00000478743 ADAM12O43184 909 aa13.85□□□□□ -0.19
HDAC8-217ENST00000478743 CEBPBP17676 345 aa13.85□□□□□ -0.19
HDAC8-217ENST00000478743 CNR2P34972 360 aa13.85□□□□□ -0.19
HDAC8-217ENST00000478743 WDR5BQ86VZ2 330 aa13.85□□□□□ -0.19
HDAC8-217ENST00000478743 CMTR1Q8N1G2 835 aaKnown RBP13.85□□□□□ -0.19
HDAC8-217ENST00000478743 URGCPQ8TCY9 931 aa13.85□□□□□ -0.19
HDAC8-217ENST00000478743 DNASE1L2Q92874 299 aa13.85□□□□□ -0.19
HDAC8-217ENST00000478743 IER2Q9BTL4 223 aa13.85□□□□□ -0.19
HDAC8-217ENST00000478743 PSTPIP2Q9H939 334 aa13.85□□□□□ -0.19
HDAC8-217ENST00000478743 RSAD1Q9HA92 442 aa13.85□□□□□ -0.19
HDAC8-217ENST00000478743 LY9Q9HBG7 655 aa13.85□□□□□ -0.19
HDAC8-217ENST00000478743 MIOSQ9NXC5 875 aa13.85□□□□□ -0.19
HDAC8-217ENST00000478743 DNMT3BQ9UBC3 853 aaKnown RBP13.85□□□□□ -0.19
HDAC8-217ENST00000478743 MAFBQ9Y5Q3 323 aaPredicted RBP13.85□□□□□ -0.19
HDAC8-217ENST00000478743 A0A087WZ62 844 aa13.84□□□□□ -0.19
HDAC8-217ENST00000478743 ZNF862O60290 1169 aa13.84□□□□□ -0.19
HDAC8-217ENST00000478743 PAPSS2O95340 614 aaPredicted RBP13.84□□□□□ -0.19
HDAC8-217ENST00000478743 PLEKHA8P1O95397 391 aa13.84□□□□□ -0.19
HDAC8-217ENST00000478743 C8AP07357 584 aa13.84□□□□□ -0.19
HDAC8-217ENST00000478743 KIF5BP33176 963 aa13.84□□□□□ -0.19
HDAC8-217ENST00000478743 PTGDRQ13258 359 aa13.84□□□□□ -0.19
HDAC8-217ENST00000478743 SPEM1Q8N4L4 309 aa13.84□□□□□ -0.19
HDAC8-217ENST00000478743 FAM193BQ96PV7 902 aaPredicted RBP13.84□□□□□ -0.19
HDAC8-217ENST00000478743 FDXACB1Q9BRP7 624 aaPredicted RBP13.84□□□□□ -0.19
HDAC8-217ENST00000478743 CHST12Q9NRB3 414 aa13.84□□□□□ -0.19
HDAC8-217ENST00000478743 STK39Q9UEW8 545 aa13.84□□□□□ -0.19
HDAC8-217ENST00000478743 SSX2IPQ9Y2D8 614 aa13.84□□□□□ -0.19
HDAC8-217ENST00000478743 NEUROG3Q9Y4Z2 214 aa13.84□□□□□ -0.19
HDAC8-217ENST00000478743 PCDHB2Q9Y5E7 798 aa13.84□□□□□ -0.19
HDAC8-217ENST00000478743 PIAS3Q9Y6X2 628 aa13.84□□□□□ -0.19
HDAC8-217ENST00000478743 KIF26AQ9ULI4 1882 aaPredicted RBP13.83□□□□□ -0.2
HDAC8-217ENST00000478743 SPDYE3A6NKU9 549 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms