RNA–Protein interactions for RNA: ENST00000478525.1

HPS3-205, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 601 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-205ENST00000478525 GPRIN1Q7Z2K8 1008 aa4.95□□□□□ -1.62
HPS3-205ENST00000478525 SYT12Q8IV01 421 aa4.95□□□□□ -1.62
HPS3-205ENST00000478525 ZZZ3Q8IYH5 903 aa4.95□□□□□ -1.62
HPS3-205ENST00000478525 LCORLQ8N3X6 602 aa4.95□□□□□ -1.62
HPS3-205ENST00000478525 CDYL2Q8N8U2 506 aa4.95□□□□□ -1.62
HPS3-205ENST00000478525 LINC00476Q8WZB0 136 aa4.95□□□□□ -1.62
HPS3-205ENST00000478525 FDXACB1Q9BRP7 624 aaPredicted RBP4.95□□□□□ -1.62
HPS3-205ENST00000478525 HDAC5Q9UQL6 1122 aa4.95□□□□□ -1.62
HPS3-205ENST00000478525 EPN1Q9Y6I3 576 aaPredicted RBP4.95□□□□□ -1.62
HPS3-205ENST00000478525 SPATA31A6Q5VVP1 1343 aa4.95□□□□□ -1.62
HPS3-205ENST00000478525 INO80B-WBP1J3KQ70 363 aa4.94□□□□□ -1.62
HPS3-205ENST00000478525 ATP2A2P16615 1042 aaKnown RBP4.94□□□□□ -1.62
HPS3-205ENST00000478525 SDSP20132 328 aa4.94□□□□□ -1.62
HPS3-205ENST00000478525 AVPR1BP47901 424 aa4.94□□□□□ -1.62
HPS3-205ENST00000478525 SEC24CP53992 1094 aa4.94□□□□□ -1.62
HPS3-205ENST00000478525 DUSP2Q05923 314 aa4.94□□□□□ -1.62
HPS3-205ENST00000478525 FOXI1Q12951 378 aa4.94□□□□□ -1.62
HPS3-205ENST00000478525 CDCA2Q69YH5 1023 aaPredicted RBP4.94□□□□□ -1.62
HPS3-205ENST00000478525 BTNL9Q6UXG8 535 aa4.94□□□□□ -1.62
HPS3-205ENST00000478525 PLXDC1Q8IUK5 500 aa4.94□□□□□ -1.62
HPS3-205ENST00000478525 INO80BQ9C086 356 aaPredicted RBP4.94□□□□□ -1.62
HPS3-205ENST00000478525 UNC119BA6NIH7 251 aa4.93□□□□□ -1.62
HPS3-205ENST00000478525 PRR5-ARHGAP8B1AHC4 643 aa4.93□□□□□ -1.62
HPS3-205ENST00000478525 ZNF185O15231 689 aa4.93□□□□□ -1.62
HPS3-205ENST00000478525 BMPR1AP36894 532 aa4.93□□□□□ -1.62
HPS3-205ENST00000478525 PTH2RP49190 550 aa4.93□□□□□ -1.62
HPS3-205ENST00000478525 NHLH2Q02577 135 aa4.93□□□□□ -1.62
HPS3-205ENST00000478525 PRR16Q569H4 304 aa4.93□□□□□ -1.62
HPS3-205ENST00000478525 FBXO42Q6P3S6 717 aa4.93□□□□□ -1.62
HPS3-205ENST00000478525 TAS1R1Q7RTX1 841 aa4.93□□□□□ -1.62
HPS3-205ENST00000478525 CPEB3Q8NE35 698 aaKnown RBP4.93□□□□□ -1.62
HPS3-205ENST00000478525 OR10H5Q8NGA6 315 aa4.93□□□□□ -1.62
HPS3-205ENST00000478525 CAVIN3Q969G5 261 aa4.93□□□□□ -1.62
HPS3-205ENST00000478525 COQ10AQ96MF6 247 aa4.93□□□□□ -1.62
HPS3-205ENST00000478525 ADAM2Q99965 735 aa4.93□□□□□ -1.62
HPS3-205ENST00000478525 PFKMP08237 780 aa4.92□□□□□ -1.62
HPS3-205ENST00000478525 HKR1P10072 659 aa4.92□□□□□ -1.62
HPS3-205ENST00000478525 CD40P25942 277 aa4.92□□□□□ -1.62
HPS3-205ENST00000478525 FLT3P36888 993 aa4.92□□□□□ -1.62
HPS3-205ENST00000478525 PLA2G5P39877 138 aa4.92□□□□□ -1.62
HPS3-205ENST00000478525 GUCY1B3Q02153 619 aa4.92□□□□□ -1.62
HPS3-205ENST00000478525 TP53BP2Q13625 1128 aa4.92□□□□□ -1.62
HPS3-205ENST00000478525 PDCD4Q53EL6 469 aaKnown RBP4.92□□□□□ -1.62
HPS3-205ENST00000478525 UBE2R2Q712K3 238 aaPredicted RBP4.92□□□□□ -1.62
HPS3-205ENST00000478525 ASB10Q8WXI3 467 aa4.92□□□□□ -1.62
HPS3-205ENST00000478525 FERMT2Q96AC1 680 aa4.92□□□□□ -1.62
HPS3-205ENST00000478525 RSAD1Q9HA92 442 aa4.92□□□□□ -1.62
HPS3-205ENST00000478525 SPON1Q9HCB6 807 aa4.92□□□□□ -1.62
HPS3-205ENST00000478525 USP36Q9P275 1121 aaKnown RBP4.92□□□□□ -1.62
HPS3-205ENST00000478525 USP18Q9UMW8 372 aa4.92□□□□□ -1.62
HPS3-205ENST00000478525 INSL6Q9Y581 213 aa4.92□□□□□ -1.62
HPS3-205ENST00000478525 POLR2AP24928 1970 aaKnown RBP4.91□□□□□ -1.62
HPS3-205ENST00000478525 ST20-MTHFSA0A0A6YYL1 179 aa4.91□□□□□ -1.62
HPS3-205ENST00000478525 A0A1W2PR48 441 aa4.91□□□□□ -1.62
HPS3-205ENST00000478525 PIPSLA2A3N6 862 aa4.91□□□□□ -1.62
HPS3-205ENST00000478525 HSP90B1P14625 803 aaKnown RBP4.91□□□□□ -1.62
HPS3-205ENST00000478525 MGAT5Q09328 741 aa4.91□□□□□ -1.62
HPS3-205ENST00000478525 SQSTM1Q13501 440 aa4.91□□□□□ -1.62
HPS3-205ENST00000478525 CFAP100Q494V2 611 aa4.91□□□□□ -1.62
HPS3-205ENST00000478525 ANKS6Q68DC2 871 aa4.91□□□□□ -1.62
HPS3-205ENST00000478525 FAM98AQ8NCA5 519 aaKnown RBP4.91□□□□□ -1.62
HPS3-205ENST00000478525 SIMC1Q8NDZ2 872 aa4.91□□□□□ -1.62
HPS3-205ENST00000478525 PMFBP1Q8TBY8 1022 aa4.91□□□□□ -1.62
HPS3-205ENST00000478525 MSRAQ9UJ68 235 aa4.91□□□□□ -1.62
HPS3-205ENST00000478525 CLCA2Q9UQC9 943 aa4.91□□□□□ -1.62
HPS3-205ENST00000478525 MARCH11A6NNE9 402 aa4.9□□□□□ -1.63
HPS3-205ENST00000478525 DIRC3C9JPN6 131 aa4.9□□□□□ -1.63
HPS3-205ENST00000478525 DDX6P26196 483 aaKnown RBP eCLIP4.9□□□□□ -1.63
HPS3-205ENST00000478525 CXCR5P32302 372 aa4.9□□□□□ -1.63
HPS3-205ENST00000478525 LRRC32Q14392 662 aa4.9□□□□□ -1.63
HPS3-205ENST00000478525 DRICH1Q6PGQ1 229 aaPredicted RBP4.9□□□□□ -1.63
HPS3-205ENST00000478525 ESPNLQ6ZVH7 1005 aa4.9□□□□□ -1.63
HPS3-205ENST00000478525 EFHBQ8N7U6 833 aa4.9□□□□□ -1.63
HPS3-205ENST00000478525 BOLLQ8N9W6 283 aaKnown RBP4.9□□□□□ -1.63
HPS3-205ENST00000478525 GAB3Q8WWW8 586 aa4.9□□□□□ -1.63
HPS3-205ENST00000478525 ZNF496Q96IT1 587 aaPredicted RBP4.9□□□□□ -1.63
HPS3-205ENST00000478525 C8orf37Q96NL8 207 aa4.9□□□□□ -1.63
HPS3-205ENST00000478525 ORAI3Q9BRQ5 295 aa4.9□□□□□ -1.63
HPS3-205ENST00000478525 ALG13Q9NP73 1137 aaKnown RBP4.9□□□□□ -1.63
HPS3-205ENST00000478525 ZKSCAN5Q9Y2L8 839 aa4.9□□□□□ -1.63
HPS3-205ENST00000478525 ZMYM3Q14202 1370 aa4.9□□□□□ -1.63
HPS3-205ENST00000478525 LCHNA4D1U4 455 aa4.89□□□□□ -1.63
HPS3-205ENST00000478525 ZNF891A8MT65 544 aaPredicted RBP4.89□□□□□ -1.63
HPS3-205ENST00000478525 PPP1R12AO14974 1030 aaPredicted RBP4.89□□□□□ -1.63
HPS3-205ENST00000478525 TGM5O43548 720 aa4.89□□□□□ -1.63
HPS3-205ENST00000478525 SPDEFO95238 335 aa4.89□□□□□ -1.63
HPS3-205ENST00000478525 CDK4P11802 303 aa4.89□□□□□ -1.63
HPS3-205ENST00000478525 GPR15P49685 360 aa4.89□□□□□ -1.63
HPS3-205ENST00000478525 APBA1Q02410 837 aa4.89□□□□□ -1.63
HPS3-205ENST00000478525 DSG1Q02413 1049 aa4.89□□□□□ -1.63
HPS3-205ENST00000478525 PAPD7Q5XG87 772 aaKnown RBP4.89□□□□□ -1.63
HPS3-205ENST00000478525 LMBR1LQ6UX01 489 aa4.89□□□□□ -1.63
HPS3-205ENST00000478525 NXPE1Q8N323 547 aa4.89□□□□□ -1.63
HPS3-205ENST00000478525 RNF169Q8NCN4 708 aa4.89□□□□□ -1.63
HPS3-205ENST00000478525 CHTF18Q8WVB6 975 aa4.89□□□□□ -1.63
HPS3-205ENST00000478525 NEU1Q99519 415 aa4.89□□□□□ -1.63
HPS3-205ENST00000478525 MAP3K2Q9Y2U5 619 aa4.89□□□□□ -1.63
HPS3-205ENST00000478525 COL11A2P13942 1736 aaPredicted RBP4.89□□□□□ -1.63
HPS3-205ENST00000478525 B5MCH6 92 aa4.88□□□□□ -1.63
HPS3-205ENST00000478525 NRP2O60462 931 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms