RNA–Protein interactions for RNA: ENST00000478423.6

NPHP4-208, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,467 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-208ENST00000478423 MXD4Q14582 209 aaPredicted RBP15.17■□□□□ 0.02
NPHP4-208ENST00000478423 TRIM59Q8IWR1 403 aa15.17■□□□□ 0.02
NPHP4-208ENST00000478423 KCTD17Q8N5Z5 321 aa15.17■□□□□ 0.02
NPHP4-208ENST00000478423 FAM163AQ96GL9 167 aaPredicted RBP15.17■□□□□ 0.02
NPHP4-208ENST00000478423 ASNSD1Q9NWL6 643 aa15.17■□□□□ 0.02
NPHP4-208ENST00000478423 CPSF3Q9UKF6 684 aaKnown RBP15.17■□□□□ 0.02
NPHP4-208ENST00000478423 KIAA0391O15091 583 aaKnown RBP15.16■□□□□ 0.02
NPHP4-208ENST00000478423 ZNF185O15231 689 aa15.16■□□□□ 0.02
NPHP4-208ENST00000478423 DYNC1LI2O43237 492 aaPredicted RBP15.16■□□□□ 0.02
NPHP4-208ENST00000478423 CSPG5O95196 566 aa15.16■□□□□ 0.02
NPHP4-208ENST00000478423 HOXA10P31260 410 aaPredicted RBP15.16■□□□□ 0.02
NPHP4-208ENST00000478423 SNAPC2Q13487 334 aa15.16■□□□□ 0.02
NPHP4-208ENST00000478423 ARL13BQ3SXY8 428 aa15.16■□□□□ 0.02
NPHP4-208ENST00000478423 RAPH1Q70E73 1250 aa15.16■□□□□ 0.02
NPHP4-208ENST00000478423 ANKRD13AQ8IZ07 590 aa15.16■□□□□ 0.02
NPHP4-208ENST00000478423 MKNK1Q9BUB5 465 aa15.16■□□□□ 0.02
NPHP4-208ENST00000478423 ADAM21Q9UKJ8 722 aa15.16■□□□□ 0.02
NPHP4-208ENST00000478423 AP3M2P53677 418 aa15.16■□□□□ 0.02
NPHP4-208ENST00000478423 TAF1CQ15572 869 aaPredicted RBP15.16■□□□□ 0.02
NPHP4-208ENST00000478423 NXNQ6DKJ4 435 aa15.16■□□□□ 0.02
NPHP4-208ENST00000478423 C4orf50Q6ZRC1 276 aa15.16■□□□□ 0.02
NPHP4-208ENST00000478423 RHOT1Q8IXI2 618 aa15.16■□□□□ 0.02
NPHP4-208ENST00000478423 SLC30A5Q8TAD4 765 aa15.16■□□□□ 0.02
NPHP4-208ENST00000478423 RNPC3Q96LT9 517 aaKnown RBP15.16■□□□□ 0.02
NPHP4-208ENST00000478423 AMACRQ9UHK6 382 aa15.16■□□□□ 0.02
NPHP4-208ENST00000478423 SRGAP2BP0DMP2 458 aa15.16■□□□□ 0.02
NPHP4-208ENST00000478423 XRRA1Q6P2D8 792 aa15.16■□□□□ 0.02
NPHP4-208ENST00000478423 TTC13Q8NBP0 860 aa15.16■□□□□ 0.02
NPHP4-208ENST00000478423 EFCC1Q9HA90 598 aa15.16■□□□□ 0.02
NPHP4-208ENST00000478423 ZCCHC17Q9NP64 241 aaKnown RBP15.16■□□□□ 0.02
NPHP4-208ENST00000478423 SAYSD1Q9NPB0 183 aa15.16■□□□□ 0.02
NPHP4-208ENST00000478423 GINM1Q9NU53 330 aa15.16■□□□□ 0.02
NPHP4-208ENST00000478423 A8MXQ7 604 aa15.15■□□□□ 0.02
NPHP4-208ENST00000478423 HMGB1P1B2RPK0 211 aaPredicted RBP15.15■□□□□ 0.02
NPHP4-208ENST00000478423 ARP10275 920 aa15.15■□□□□ 0.02
NPHP4-208ENST00000478423 C6orf118Q5T5N4 469 aa15.15■□□□□ 0.02
NPHP4-208ENST00000478423 FAM102AQ5T9C2 384 aaPredicted RBP15.15■□□□□ 0.02
NPHP4-208ENST00000478423 MOXD1Q6UVY6 613 aa15.15■□□□□ 0.02
NPHP4-208ENST00000478423 RUSC1Q9BVN2 902 aa15.15■□□□□ 0.02
NPHP4-208ENST00000478423 AK9Q5TCS8 1911 aa15.15■□□□□ 0.02
NPHP4-208ENST00000478423 EIF3DO15371 548 aaKnown RBP eCLIP15.15■□□□□ 0.02
NPHP4-208ENST00000478423 GSTA1P08263 222 aa15.15■□□□□ 0.02
NPHP4-208ENST00000478423 GSTA2P09210 222 aa15.15■□□□□ 0.02
NPHP4-208ENST00000478423 BZW1Q7L1Q6 419 aaKnown RBP15.15■□□□□ 0.02
NPHP4-208ENST00000478423 PCGF5Q86SE9 256 aa15.15■□□□□ 0.02
NPHP4-208ENST00000478423 CHST13Q8NET6 341 aa15.15■□□□□ 0.02
NPHP4-208ENST00000478423 TARS2Q9BW92 718 aaKnown RBP15.15■□□□□ 0.02
NPHP4-208ENST00000478423 ANKEF1Q9NU02 776 aa15.15■□□□□ 0.02
NPHP4-208ENST00000478423 VSNL1P62760 191 aa15.15■□□□□ 0.02
NPHP4-208ENST00000478423 NCOA4Q13772 614 aa15.15■□□□□ 0.02
NPHP4-208ENST00000478423 SCN4BQ8IWT1 228 aa15.15■□□□□ 0.02
NPHP4-208ENST00000478423 SCFD2Q8WU76 684 aa15.15■□□□□ 0.02
NPHP4-208ENST00000478423 CALR3Q96L12 384 aaKnown RBP15.15■□□□□ 0.02
NPHP4-208ENST00000478423 NCAPGQ9BPX3 1015 aa15.15■□□□□ 0.02
NPHP4-208ENST00000478423 WNT8AQ9H1J5 351 aa15.15■□□□□ 0.02
NPHP4-208ENST00000478423 ATP8B3O60423 1300 aa15.15■□□□□ 0.02
NPHP4-208ENST00000478423 RTN2O75298 545 aa15.15■□□□□ 0.02
NPHP4-208ENST00000478423 CHRNA3P32297 505 aa15.15■□□□□ 0.02
NPHP4-208ENST00000478423 ADCY2Q08462 1091 aa15.15■□□□□ 0.02
NPHP4-208ENST00000478423 NBPF12Q5TAG4 269 aaPredicted RBP15.15■□□□□ 0.02
NPHP4-208ENST00000478423 LRRC71Q8N4P6 559 aa15.15■□□□□ 0.02
NPHP4-208ENST00000478423 OR6J1Q8NGC5 347 aa15.15■□□□□ 0.02
NPHP4-208ENST00000478423 ACAP3Q96P50 834 aa15.15■□□□□ 0.02
NPHP4-208ENST00000478423 KIFC3Q9BVG8 833 aa15.15■□□□□ 0.02
NPHP4-208ENST00000478423 UNC45AQ9H3U1 944 aa15.15■□□□□ 0.02
NPHP4-208ENST00000478423 CNOT10Q9H9A5 744 aaKnown RBP15.15■□□□□ 0.02
NPHP4-208ENST00000478423 IP6K2Q9UHH9 426 aa15.15■□□□□ 0.02
NPHP4-208ENST00000478423 MYO5BQ9ULV0 1848 aa15.15■□□□□ 0.02
NPHP4-208ENST00000478423 TYW5A2RUC4 315 aaKnown RBP15.14■□□□□ 0.01
NPHP4-208ENST00000478423 GRID2IPA4D2P6 1211 aa15.14■□□□□ 0.01
NPHP4-208ENST00000478423 SART1O43290 800 aaKnown RBP15.14■□□□□ 0.01
NPHP4-208ENST00000478423 SLC25A27O95847 323 aa15.14■□□□□ 0.01
NPHP4-208ENST00000478423 KRT7P08729 469 aa15.14■□□□□ 0.01
NPHP4-208ENST00000478423 CLTAP09496 248 aa15.14■□□□□ 0.01
NPHP4-208ENST00000478423 BACE1P56817 501 aa15.14■□□□□ 0.01
NPHP4-208ENST00000478423 TTI2Q6NXR4 508 aa15.14■□□□□ 0.01
NPHP4-208ENST00000478423 PLAGL2Q9UPG8 496 aa15.14■□□□□ 0.01
NPHP4-208ENST00000478423 ARHGAP42A6NI28 874 aa15.14■□□□□ 0.01
NPHP4-208ENST00000478423 PFDN6O15212 129 aa15.14■□□□□ 0.01
NPHP4-208ENST00000478423 TPD52P55327 224 aaPredicted RBP15.14■□□□□ 0.01
NPHP4-208ENST00000478423 NAA25Q14CX7 972 aa15.14■□□□□ 0.01
NPHP4-208ENST00000478423 APOBEC3HQ6NTF7 200 aaKnown RBP15.14■□□□□ 0.01
NPHP4-208ENST00000478423 RWDD4Q6NW29 188 aaKnown RBP15.14■□□□□ 0.01
NPHP4-208ENST00000478423 CCDC137Q6PK04 289 aaKnown RBP15.14■□□□□ 0.01
NPHP4-208ENST00000478423 PPP1R12CQ9BZL4 782 aa15.14■□□□□ 0.01
NPHP4-208ENST00000478423 AGPAT3Q9NRZ7 376 aa15.14■□□□□ 0.01
NPHP4-208ENST00000478423 IPO11Q9UI26 975 aaKnown RBP15.14■□□□□ 0.01
NPHP4-208ENST00000478423 AGAP1Q9UPQ3 857 aa15.14■□□□□ 0.01
NPHP4-208ENST00000478423 ANXA13P27216 316 aa15.14■□□□□ 0.01
NPHP4-208ENST00000478423 GRIK5Q16478 980 aa15.14■□□□□ 0.01
NPHP4-208ENST00000478423 ILDR1Q86SU0 546 aaPredicted RBP15.14■□□□□ 0.01
NPHP4-208ENST00000478423 TTC39CQ8N584 583 aa15.14■□□□□ 0.01
NPHP4-208ENST00000478423 FAF2Q96CS3 445 aa15.14■□□□□ 0.01
NPHP4-208ENST00000478423 LRRC1Q9BTT6 524 aa15.14■□□□□ 0.01
NPHP4-208ENST00000478423 TAF1DQ9H5J8 278 aaPredicted RBP15.14■□□□□ 0.01
NPHP4-208ENST00000478423 KCNQ5Q9NR82 932 aa15.14■□□□□ 0.01
NPHP4-208ENST00000478423 FNDC3AQ9Y2H6 1198 aaKnown RBP15.14■□□□□ 0.01
NPHP4-208ENST00000478423 CAMTA1Q9Y6Y1 1673 aa15.14■□□□□ 0.01
NPHP4-208ENST00000478423 NFIBO00712 420 aa15.13■□□□□ 0.01
NPHP4-208ENST00000478423 GGCXP38435 758 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms