RNA–Protein interactions for RNA: ENST00000478365.1

DDX39B-218, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 439 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-218ENST00000478365 ZNF558Q96NG5 402 aa8.74□□□□□ -1.01
DDX39B-218ENST00000478365 CASD1Q96PB1 797 aa8.74□□□□□ -1.01
DDX39B-218ENST00000478365 PNMA5Q96PV4 448 aa8.74□□□□□ -1.01
DDX39B-218ENST00000478365 NTPCRQ9BSD7 190 aaKnown RBP8.74□□□□□ -1.01
DDX39B-218ENST00000478365 C17orf80Q9BSJ5 609 aa8.74□□□□□ -1.01
DDX39B-218ENST00000478365 RUSC1Q9BVN2 902 aa8.74□□□□□ -1.01
DDX39B-218ENST00000478365 MRPL4Q9BYD3 311 aaKnown RBP8.74□□□□□ -1.01
DDX39B-218ENST00000478365 MINDY3Q9H8M7 445 aa8.74□□□□□ -1.01
DDX39B-218ENST00000478365 RSAD1Q9HA92 442 aa8.74□□□□□ -1.01
DDX39B-218ENST00000478365 GPRC5CQ9NQ84 441 aa8.74□□□□□ -1.01
DDX39B-218ENST00000478365 KMT5AQ9NQR1 393 aa8.74□□□□□ -1.01
DDX39B-218ENST00000478365 ARHGAP28Q9P2N2 729 aa8.74□□□□□ -1.01
DDX39B-218ENST00000478365 SEL1LQ9UBV2 794 aa8.74□□□□□ -1.01
DDX39B-218ENST00000478365 MTCH2Q9Y6C9 303 aa8.74□□□□□ -1.01
DDX39B-218ENST00000478365 MRPL42Q9Y6G3 142 aaKnown RBP8.74□□□□□ -1.01
DDX39B-218ENST00000478365 COL6A3P12111 3177 aa8.73□□□□□ -1.01
DDX39B-218ENST00000478365 CCDC169A6NNP5 214 aa8.73□□□□□ -1.01
DDX39B-218ENST00000478365 LPXNO60711 386 aa8.73□□□□□ -1.01
DDX39B-218ENST00000478365 ARHGEF15O94989 841 aa8.73□□□□□ -1.01
DDX39B-218ENST00000478365 BRD1O95696 1058 aa8.73□□□□□ -1.01
DDX39B-218ENST00000478365 LINC00271P0C7V0 271 aa8.73□□□□□ -1.01
DDX39B-218ENST00000478365 FGFR1P11362 822 aa8.73□□□□□ -1.01
DDX39B-218ENST00000478365 ATF7P17544 494 aaPredicted RBP8.73□□□□□ -1.01
DDX39B-218ENST00000478365 GAP43P17677 238 aa8.73□□□□□ -1.01
DDX39B-218ENST00000478365 CDK11BP21127 795 aaKnown RBP8.73□□□□□ -1.01
DDX39B-218ENST00000478365 STAT6P42226 847 aa8.73□□□□□ -1.01
DDX39B-218ENST00000478365 NPTX2P47972 431 aa8.73□□□□□ -1.01
DDX39B-218ENST00000478365 ZNF131P52739 623 aa8.73□□□□□ -1.01
DDX39B-218ENST00000478365 PEX3P56589 373 aa8.73□□□□□ -1.01
DDX39B-218ENST00000478365 KRT85P78386 507 aa8.73□□□□□ -1.01
DDX39B-218ENST00000478365 PLCB3Q01970 1234 aa8.73□□□□□ -1.01
DDX39B-218ENST00000478365 CEBPZQ03701 1054 aaKnown RBP8.73□□□□□ -1.01
DDX39B-218ENST00000478365 ALCAMQ13740 583 aa8.73□□□□□ -1.01
DDX39B-218ENST00000478365 ADGRE1Q14246 886 aa8.73□□□□□ -1.01
DDX39B-218ENST00000478365 KARSQ15046 597 aaKnown RBP8.73□□□□□ -1.01
DDX39B-218ENST00000478365 PAN2Q504Q3 1202 aaKnown RBP8.73□□□□□ -1.01
DDX39B-218ENST00000478365 ZPBP2Q6X784 338 aa8.73□□□□□ -1.01
DDX39B-218ENST00000478365 SV2BQ7L1I2 683 aa8.73□□□□□ -1.01
DDX39B-218ENST00000478365 KCNK18Q7Z418 384 aa8.73□□□□□ -1.01
DDX39B-218ENST00000478365 THNSL1Q8IYQ7 743 aa8.73□□□□□ -1.01
DDX39B-218ENST00000478365 COLGALT1Q8NBJ5 622 aa8.73□□□□□ -1.01
DDX39B-218ENST00000478365 HELQQ8TDG4 1101 aa8.73□□□□□ -1.01
DDX39B-218ENST00000478365 GDPD5Q8WTR4 605 aa8.73□□□□□ -1.01
DDX39B-218ENST00000478365 HVCN1Q96D96 273 aa8.73□□□□□ -1.01
DDX39B-218ENST00000478365 CCDC34Q96HJ3 373 aa8.73□□□□□ -1.01
DDX39B-218ENST00000478365 FAM193BQ96PV7 902 aaPredicted RBP8.73□□□□□ -1.01
DDX39B-218ENST00000478365 CDCA3Q99618 268 aaPredicted RBP8.73□□□□□ -1.01
DDX39B-218ENST00000478365 TMEM175Q9BSA9 504 aa8.73□□□□□ -1.01
DDX39B-218ENST00000478365 SCAND2PQ9GZW5 306 aaPredicted RBP8.73□□□□□ -1.01
DDX39B-218ENST00000478365 CCDC113Q9H0I3 377 aa8.73□□□□□ -1.01
DDX39B-218ENST00000478365 NSUN3Q9H649 340 aaKnown RBP8.73□□□□□ -1.01
DDX39B-218ENST00000478365 CERS4Q9HA82 394 aa8.73□□□□□ -1.01
DDX39B-218ENST00000478365 PARVGQ9HBI0 331 aa8.73□□□□□ -1.01
DDX39B-218ENST00000478365 TOPORSQ9NS56 1045 aaPredicted RBP8.73□□□□□ -1.01
DDX39B-218ENST00000478365 TYW1Q9NV66 732 aaKnown RBP8.73□□□□□ -1.01
DDX39B-218ENST00000478365 FAM13BQ9NYF5 915 aa8.73□□□□□ -1.01
DDX39B-218ENST00000478365 SPG21Q9NZD8 308 aa8.73□□□□□ -1.01
DDX39B-218ENST00000478365 THEGQ9P2T0 379 aa8.73□□□□□ -1.01
DDX39B-218ENST00000478365 MTUS1Q9ULD2 1270 aa8.73□□□□□ -1.01
DDX39B-218ENST00000478365 TNFSF13BQ9Y275 285 aa8.73□□□□□ -1.01
DDX39B-218ENST00000478365 EPOPA6NHQ4 379 aa8.72□□□□□ -1.01
DDX39B-218ENST00000478365 SRGAP2BP0DMP2 458 aa8.72□□□□□ -1.01
DDX39B-218ENST00000478365 MAPTP10636 758 aaKnown RBP8.72□□□□□ -1.01
DDX39B-218ENST00000478365 IBSPP21815 317 aaPredicted RBP8.72□□□□□ -1.01
DDX39B-218ENST00000478365 ME1P48163 572 aa8.72□□□□□ -1.01
DDX39B-218ENST00000478365 TERF1P54274 439 aa8.72□□□□□ -1.01
DDX39B-218ENST00000478365 MAPK7Q13164 816 aa8.72□□□□□ -1.01
DDX39B-218ENST00000478365 GIT2Q14161 759 aa8.72□□□□□ -1.01
DDX39B-218ENST00000478365 CLLU1OSQ5K130 101 aa8.72□□□□□ -1.01
DDX39B-218ENST00000478365 UBXN11Q5T124 520 aa8.72□□□□□ -1.01
DDX39B-218ENST00000478365 ATF7IP2Q5U623 682 aa8.72□□□□□ -1.01
DDX39B-218ENST00000478365 KCNT2Q6UVM3 1135 aa8.72□□□□□ -1.01
DDX39B-218ENST00000478365 STXBP4Q6ZWJ1 553 aa8.72□□□□□ -1.01
DDX39B-218ENST00000478365 DAW1Q8N136 415 aa8.72□□□□□ -1.01
DDX39B-218ENST00000478365 IQUBQ8NA54 791 aa8.72□□□□□ -1.01
DDX39B-218ENST00000478365 ATXN2LQ8WWM7 1075 aaKnown RBP8.72□□□□□ -1.01
DDX39B-218ENST00000478365 BSNDQ8WZ55 320 aa8.72□□□□□ -1.01
DDX39B-218ENST00000478365 TRIM44Q96DX7 344 aaPredicted RBP8.72□□□□□ -1.01
DDX39B-218ENST00000478365 TMEM169Q96HH4 297 aa8.72□□□□□ -1.01
DDX39B-218ENST00000478365 EPSTI1Q96J88 318 aa8.72□□□□□ -1.01
DDX39B-218ENST00000478365 RPS6KC1Q96S38 1066 aa8.72□□□□□ -1.01
DDX39B-218ENST00000478365 TSPAN18Q96SJ8 248 aa8.72□□□□□ -1.01
DDX39B-218ENST00000478365 ARID3AQ99856 593 aa8.72□□□□□ -1.01
DDX39B-218ENST00000478365 TNMDQ9H2S6 317 aa8.72□□□□□ -1.01
DDX39B-218ENST00000478365 ST6GALNAC4Q9H4F1 302 aa8.72□□□□□ -1.01
DDX39B-218ENST00000478365 CWH43Q9H720 699 aa8.72□□□□□ -1.01
DDX39B-218ENST00000478365 NGRNQ9NPE2 291 aaKnown RBP8.72□□□□□ -1.01
DDX39B-218ENST00000478365 TLR9Q9NR96 1032 aa8.72□□□□□ -1.01
DDX39B-218ENST00000478365 BLOC1S4Q9NUP1 217 aa8.72□□□□□ -1.01
DDX39B-218ENST00000478365 RNF19AQ9NV58 838 aa8.72□□□□□ -1.01
DDX39B-218ENST00000478365 USP25Q9UHP3 1055 aa8.72□□□□□ -1.01
DDX39B-218ENST00000478365 PLAGL2Q9UPG8 496 aa8.72□□□□□ -1.01
DDX39B-218ENST00000478365 FAM50BQ9Y247 325 aa8.72□□□□□ -1.01
DDX39B-218ENST00000478365 IPPQ9Y573 584 aa8.72□□□□□ -1.01
DDX39B-218ENST00000478365 KIAA1671Q9BY89 1806 aa8.72□□□□□ -1.01
DDX39B-218ENST00000478365 A0A087WWV3 80 aa8.71□□□□□ -1.02
DDX39B-218ENST00000478365 OFD1O75665 1012 aa8.71□□□□□ -1.02
DDX39B-218ENST00000478365 TOM1L1O75674 476 aa8.71□□□□□ -1.02
DDX39B-218ENST00000478365 FGF18O76093 207 aa8.71□□□□□ -1.02
DDX39B-218ENST00000478365 NPTXRO95502 500 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms