RNA–Protein interactions for RNA: ENST00000478075.1

CALD1-218, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 193 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-218ENST00000478075 PRAMEF22A3QJZ6 481 aa2.9□□□□□ -1.95
CALD1-218ENST00000478075 NTN3O00634 580 aaPredicted RBP2.9□□□□□ -1.95
CALD1-218ENST00000478075 CFIP05156 583 aa2.9□□□□□ -1.95
CALD1-218ENST00000478075 MMEP08473 750 aa2.9□□□□□ -1.95
CALD1-218ENST00000478075 EPHB2P29323 1055 aa2.9□□□□□ -1.95
CALD1-218ENST00000478075 SCAPQ12770 1279 aa2.9□□□□□ -1.95
CALD1-218ENST00000478075 FAM214AQ32MH5 1076 aa2.9□□□□□ -1.95
CALD1-218ENST00000478075 LCE3AQ5TA76 89 aa2.9□□□□□ -1.95
CALD1-218ENST00000478075 DNAJC14Q6Y2X3 702 aaPredicted RBP2.9□□□□□ -1.95
CALD1-218ENST00000478075 CCDC81Q6ZN84 652 aa2.9□□□□□ -1.95
CALD1-218ENST00000478075 ASB15Q8WXK1 588 aa2.9□□□□□ -1.95
CALD1-218ENST00000478075 TRMOQ9BU70 441 aa2.9□□□□□ -1.95
CALD1-218ENST00000478075 BCL11AQ9H165 835 aa2.9□□□□□ -1.95
CALD1-218ENST00000478075 IPPKQ9H8X2 491 aa2.9□□□□□ -1.95
CALD1-218ENST00000478075 POLR3BQ9NW08 1133 aaPredicted RBP2.9□□□□□ -1.95
CALD1-218ENST00000478075 FAM221BA6H8Z2 402 aa2.89□□□□□ -1.95
CALD1-218ENST00000478075 AGRPO00253 132 aa2.89□□□□□ -1.95
CALD1-218ENST00000478075 GSTA4O15217 222 aa2.89□□□□□ -1.95
CALD1-218ENST00000478075 SUSD5O60279 629 aa2.89□□□□□ -1.95
CALD1-218ENST00000478075 TOP3BO95985 862 aaKnown RBP2.89□□□□□ -1.95
CALD1-218ENST00000478075 ZNF16P17020 682 aaPredicted RBP2.89□□□□□ -1.95
CALD1-218ENST00000478075 PTTG1IPP53801 180 aa2.89□□□□□ -1.95
CALD1-218ENST00000478075 TWIST1Q15672 202 aa2.89□□□□□ -1.95
CALD1-218ENST00000478075 MAN2A1Q16706 1144 aa2.89□□□□□ -1.95
CALD1-218ENST00000478075 SLC44A4Q53GD3 710 aa2.89□□□□□ -1.95
CALD1-218ENST00000478075 SUMO4Q6EEV6 95 aa2.89□□□□□ -1.95
CALD1-218ENST00000478075 SPEM1Q8N4L4 309 aa2.89□□□□□ -1.95
CALD1-218ENST00000478075 AARSD1Q9BTE6 412 aaKnown RBP2.89□□□□□ -1.95
CALD1-218ENST00000478075 KCMF1Q9P0J7 381 aa2.89□□□□□ -1.95
CALD1-218ENST00000478075 SYNPO2Q9UMS6 1093 aa2.89□□□□□ -1.95
CALD1-218ENST00000478075 CCDC9Q9Y3X0 531 aaKnown RBP2.89□□□□□ -1.95
CALD1-218ENST00000478075 AOX1Q06278 1338 aa2.89□□□□□ -1.95
CALD1-218ENST00000478075 MAFGO15525 162 aa2.88□□□□□ -1.95
CALD1-218ENST00000478075 RBM25P49756 843 aaKnown RBP2.88□□□□□ -1.95
CALD1-218ENST00000478075 TAGLNQ01995 201 aaKnown RBP2.88□□□□□ -1.95
CALD1-218ENST00000478075 C9orf50Q5SZB4 431 aa2.88□□□□□ -1.95
CALD1-218ENST00000478075 THNSL2Q86YJ6 484 aa2.88□□□□□ -1.95
CALD1-218ENST00000478075 IL17RAQ96F46 866 aa2.88□□□□□ -1.95
CALD1-218ENST00000478075 DYDC2Q96IM9 177 aa2.88□□□□□ -1.95
CALD1-218ENST00000478075 FOXB1Q99853 325 aa2.88□□□□□ -1.95
CALD1-218ENST00000478075 SH2D3AQ9BRG2 576 aa2.88□□□□□ -1.95
CALD1-218ENST00000478075 MAP3K2Q9Y2U5 619 aa2.88□□□□□ -1.95
CALD1-218ENST00000478075 GOLGA6L22H0YM25 854 aa2.87□□□□□ -1.95
CALD1-218ENST00000478075 FOXP2O15409 715 aa2.87□□□□□ -1.95
CALD1-218ENST00000478075 LINC00205P59089 165 aa2.87□□□□□ -1.95
CALD1-218ENST00000478075 ALDH6A1Q02252 535 aaKnown RBP2.87□□□□□ -1.95
CALD1-218ENST00000478075 MRPL49Q13405 166 aaKnown RBP2.87□□□□□ -1.95
CALD1-218ENST00000478075 PTRH1Q86Y79 214 aaKnown RBP2.87□□□□□ -1.95
CALD1-218ENST00000478075 LSM14BQ9BX40 385 aaKnown RBP2.87□□□□□ -1.95
CALD1-218ENST00000478075 ENKD1Q9H0I2 346 aa2.87□□□□□ -1.95
CALD1-218ENST00000478075 VPS16Q9H269 839 aa2.87□□□□□ -1.95
CALD1-218ENST00000478075 CATSPERZQ9NTU4 200 aa2.87□□□□□ -1.95
CALD1-218ENST00000478075 SOCS2O14508 198 aa2.86□□□□□ -1.95
CALD1-218ENST00000478075 SOX9P48436 509 aa2.86□□□□□ -1.95
CALD1-218ENST00000478075 PAK1Q13153 545 aa2.86□□□□□ -1.95
CALD1-218ENST00000478075 MRPL58Q14197 206 aaKnown RBP2.86□□□□□ -1.95
CALD1-218ENST00000478075 NPY5RQ15761 445 aa2.86□□□□□ -1.95
CALD1-218ENST00000478075 STYK1Q6J9G0 422 aa2.86□□□□□ -1.95
CALD1-218ENST00000478075 SND1Q7KZF4 910 aaKnown RBP eCLIP2.86□□□□□ -1.95
CALD1-218ENST00000478075 YTHDF3Q7Z739 585 aaKnown RBP2.86□□□□□ -1.95
CALD1-218ENST00000478075 FAM43AQ8N2R8 423 aa2.86□□□□□ -1.95
CALD1-218ENST00000478075 OR10H5Q8NGA6 315 aa2.86□□□□□ -1.95
CALD1-218ENST00000478075 OR5M3Q8NGP4 307 aa2.86□□□□□ -1.95
CALD1-218ENST00000478075 CASKIN2Q8WXE0 1202 aa2.86□□□□□ -1.95
CALD1-218ENST00000478075 THOC3Q96J01 351 aaKnown RBP2.86□□□□□ -1.95
CALD1-218ENST00000478075 UIMC1Q96RL1 719 aa2.86□□□□□ -1.95
CALD1-218ENST00000478075 ARID3AQ99856 593 aa2.86□□□□□ -1.95
CALD1-218ENST00000478075 TEX101Q9BY14 249 aa2.86□□□□□ -1.95
CALD1-218ENST00000478075 SPON1Q9HCB6 807 aa2.86□□□□□ -1.95
CALD1-218ENST00000478075 KCNH7Q9NS40 1196 aa2.86□□□□□ -1.95
CALD1-218ENST00000478075 ATP11BQ9Y2G3 1177 aa2.86□□□□□ -1.95
CALD1-218ENST00000478075 MMP24Q9Y5R2 645 aa2.86□□□□□ -1.95
CALD1-218ENST00000478075 CRY1Q16526 586 aa2.85□□□□□ -1.95
CALD1-218ENST00000478075 FBXW5Q969U6 566 aa2.85□□□□□ -1.95
CALD1-218ENST00000478075 EPN3Q9H201 632 aa2.85□□□□□ -1.95
CALD1-218ENST00000478075 GALNT9Q9HCQ5 603 aa2.85□□□□□ -1.95
CALD1-218ENST00000478075 KCTD5Q9NXV2 234 aa2.85□□□□□ -1.95
CALD1-218ENST00000478075 PEX1O43933 1283 aa2.84□□□□□ -1.95
CALD1-218ENST00000478075 FSBPO95073 299 aa2.84□□□□□ -1.95
CALD1-218ENST00000478075 ERCC3P19447 782 aa2.84□□□□□ -1.95
CALD1-218ENST00000478075 GZMKP49863 264 aa2.84□□□□□ -1.95
CALD1-218ENST00000478075 ROM1Q03395 351 aa2.84□□□□□ -1.95
CALD1-218ENST00000478075 TSTD2Q5T7W7 516 aa2.84□□□□□ -1.95
CALD1-218ENST00000478075 EFCAB12Q6NXP0 572 aa2.84□□□□□ -1.95
CALD1-218ENST00000478075 MRPL10Q7Z7H8 261 aaKnown RBP2.84□□□□□ -1.95
CALD1-218ENST00000478075 BOD1Q96IK1 185 aa2.84□□□□□ -1.95
CALD1-218ENST00000478075 IER2Q9BTL4 223 aa2.84□□□□□ -1.95
CALD1-218ENST00000478075 OSBPL6Q9BZF3 934 aa2.84□□□□□ -1.95
CALD1-218ENST00000478075 HIPK2Q9H2X6 1198 aa2.84□□□□□ -1.95
CALD1-218ENST00000478075 GINM1Q9NU53 330 aa2.84□□□□□ -1.95
CALD1-218ENST00000478075 TMEM74BQ9NUR3 256 aa2.84□□□□□ -1.95
CALD1-218ENST00000478075 USP15Q9Y4E8 981 aaPredicted RBP2.84□□□□□ -1.95
CALD1-218ENST00000478075 PCDHB1Q9Y5F3 818 aa2.84□□□□□ -1.95
CALD1-218ENST00000478075 B5MCH6 92 aa2.83□□□□□ -1.96
CALD1-218ENST00000478075 LATS1O95835 1130 aa2.83□□□□□ -1.96
CALD1-218ENST00000478075 CAPNS1P04632 268 aa2.83□□□□□ -1.96
CALD1-218ENST00000478075 AMY2AP04746 511 aa2.83□□□□□ -1.96
CALD1-218ENST00000478075 T-ENOLP0DO92 83 aa2.83□□□□□ -1.96
CALD1-218ENST00000478075 NAT1P18440 290 aa2.83□□□□□ -1.96
CALD1-218ENST00000478075 KRT15P19012 456 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms