RNA–Protein interactions for RNA: ENST00000477890.6

CPSF7-211, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,234 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-211ENST00000477890 TPCN1Q9ULQ1 816 aa13.1□□□□□ -0.31
CPSF7-211ENST00000477890 PRG3Q9Y2Y8 225 aaPredicted RBP13.1□□□□□ -0.31
CPSF7-211ENST00000477890 IPPQ9Y573 584 aa13.1□□□□□ -0.31
CPSF7-211ENST00000477890 PFKFB2O60825 505 aa13.09□□□□□ -0.31
CPSF7-211ENST00000477890 LILRB3O75022 631 aa13.09□□□□□ -0.31
CPSF7-211ENST00000477890 SOD2P04179 222 aa13.09□□□□□ -0.31
CPSF7-211ENST00000477890 MLH1P40692 756 aa13.09□□□□□ -0.31
CPSF7-211ENST00000477890 OR1G1P47890 313 aa13.09□□□□□ -0.31
CPSF7-211ENST00000477890 PLXNA3P51805 1871 aa13.09□□□□□ -0.31
CPSF7-211ENST00000477890 AK2P54819 239 aa13.09□□□□□ -0.31
CPSF7-211ENST00000477890 SPIRE1Q08AE8 756 aa13.09□□□□□ -0.31
CPSF7-211ENST00000477890 NCBP1Q09161 790 aaKnown RBP13.09□□□□□ -0.31
CPSF7-211ENST00000477890 NR5A1Q13285 461 aa13.09□□□□□ -0.31
CPSF7-211ENST00000477890 TFDP1Q14186 410 aa13.09□□□□□ -0.31
CPSF7-211ENST00000477890 MXD4Q14582 209 aaPredicted RBP13.09□□□□□ -0.31
CPSF7-211ENST00000477890 NOTUMQ6P988 496 aa13.09□□□□□ -0.31
CPSF7-211ENST00000477890 OTOP3Q7RTS5 596 aa13.09□□□□□ -0.31
CPSF7-211ENST00000477890 COLGALT2Q8IYK4 626 aa13.09□□□□□ -0.31
CPSF7-211ENST00000477890 WASF1Q92558 559 aa13.09□□□□□ -0.31
CPSF7-211ENST00000477890 GAD1Q99259 594 aa13.09□□□□□ -0.31
CPSF7-211ENST00000477890 HERC2P3Q9BVR0 1158 aa13.09□□□□□ -0.31
CPSF7-211ENST00000477890 XPNPEP1Q9NQW7 623 aa13.09□□□□□ -0.31
CPSF7-211ENST00000477890 MARCH5Q9NX47 278 aa13.09□□□□□ -0.31
CPSF7-211ENST00000477890 ORC3Q9UBD5 711 aaPredicted RBP13.09□□□□□ -0.31
CPSF7-211ENST00000477890 HES2Q9Y543 173 aa13.09□□□□□ -0.31
CPSF7-211ENST00000477890 ARL5CA6NH57 179 aa13.08□□□□□ -0.32
CPSF7-211ENST00000477890 INO80B-WBP1J3KQ70 363 aa13.08□□□□□ -0.32
CPSF7-211ENST00000477890 TSPAN1O60635 241 aa13.08□□□□□ -0.32
CPSF7-211ENST00000477890 SLITRK3O94933 977 aa13.08□□□□□ -0.32
CPSF7-211ENST00000477890 CTDNEP1O95476 244 aa13.08□□□□□ -0.32
CPSF7-211ENST00000477890 AXLP30530 894 aa13.08□□□□□ -0.32
CPSF7-211ENST00000477890 KRT2P35908 639 aa13.08□□□□□ -0.32
CPSF7-211ENST00000477890 SCNN1GP51170 649 aa13.08□□□□□ -0.32
CPSF7-211ENST00000477890 PTENP60484 403 aa13.08□□□□□ -0.32
CPSF7-211ENST00000477890 PCBP1Q15365 356 aaKnown RBP eCLIP13.08□□□□□ -0.321e-15■■■■■ 80.2
CPSF7-211ENST00000477890 ASTLQ6HA08 431 aaPredicted RBP13.08□□□□□ -0.32
CPSF7-211ENST00000477890 C15orf39Q6ZRI6 1047 aa13.08□□□□□ -0.32
CPSF7-211ENST00000477890 TAS1R1Q7RTX1 841 aa13.08□□□□□ -0.32
CPSF7-211ENST00000477890 CCDC51Q96ER9 411 aa13.08□□□□□ -0.32
CPSF7-211ENST00000477890 RPS6KC1Q96S38 1066 aa13.08□□□□□ -0.32
CPSF7-211ENST00000477890 EIF2AK1Q9BQI3 630 aaKnown RBP13.08□□□□□ -0.32
CPSF7-211ENST00000477890 APOL6Q9BWW8 343 aa13.08□□□□□ -0.32
CPSF7-211ENST00000477890 TRIM6Q9C030 488 aaPredicted RBP13.08□□□□□ -0.32
CPSF7-211ENST00000477890 RNF39Q9H2S5 420 aa13.08□□□□□ -0.32
CPSF7-211ENST00000477890 BRMS1Q9HCU9 246 aa13.08□□□□□ -0.32
CPSF7-211ENST00000477890 MAN1C1Q9NR34 630 aa13.08□□□□□ -0.32
CPSF7-211ENST00000477890 MIOSQ9NXC5 875 aa13.08□□□□□ -0.32
CPSF7-211ENST00000477890 SSX2IPQ9Y2D8 614 aa13.08□□□□□ -0.32
CPSF7-211ENST00000477890 INPPL1O15357 1258 aa13.07□□□□□ -0.32
CPSF7-211ENST00000477890 ADH1AP07327 375 aa13.07□□□□□ -0.32
CPSF7-211ENST00000477890 MYBP10242 640 aa13.07□□□□□ -0.32
CPSF7-211ENST00000477890 GLUD2P49448 558 aa13.07□□□□□ -0.32
CPSF7-211ENST00000477890 DSC1Q08554 894 aa13.07□□□□□ -0.32
CPSF7-211ENST00000477890 CAPSQ13938 189 aa13.07□□□□□ -0.32
CPSF7-211ENST00000477890 CALCRLQ16602 461 aa13.07□□□□□ -0.32
CPSF7-211ENST00000477890 ASAP3Q8TDY4 903 aa13.07□□□□□ -0.32
CPSF7-211ENST00000477890 ZFP42Q96MM3 310 aa13.07□□□□□ -0.32
CPSF7-211ENST00000477890 CCDC43Q96MW1 224 aaKnown RBP13.07□□□□□ -0.32
CPSF7-211ENST00000477890 CSRNP2Q9H175 543 aa13.07□□□□□ -0.32
CPSF7-211ENST00000477890 PCDHA12Q9UN75 941 aa13.07□□□□□ -0.32
CPSF7-211ENST00000477890 CCDC195A0A1B0GUA6 201 aa13.06□□□□□ -0.32
CPSF7-211ENST00000477890 F8W810 466 aa13.06□□□□□ -0.32
CPSF7-211ENST00000477890 TEX28O15482 410 aa13.06□□□□□ -0.32
CPSF7-211ENST00000477890 NR1I2O75469 434 aa13.06□□□□□ -0.32
CPSF7-211ENST00000477890 DGAT1O75907 488 aa13.06□□□□□ -0.32
CPSF7-211ENST00000477890 LYPLA2O95372 231 aa13.06□□□□□ -0.32
CPSF7-211ENST00000477890 GLUD1P00367 558 aa13.06□□□□□ -0.32
CPSF7-211ENST00000477890 FDPSP14324 419 aaKnown RBP13.06□□□□□ -0.32
CPSF7-211ENST00000477890 ARF4P18085 180 aaPredicted RBP13.06□□□□□ -0.32
CPSF7-211ENST00000477890 CLCN5P51795 746 aa13.06□□□□□ -0.32
CPSF7-211ENST00000477890 MBTD1Q05BQ5 628 aa13.06□□□□□ -0.32
CPSF7-211ENST00000477890 POU5F1BQ06416 359 aa13.06□□□□□ -0.32
CPSF7-211ENST00000477890 TDGQ13569 410 aa13.06□□□□□ -0.32
CPSF7-211ENST00000477890 ANKRD1Q15327 319 aa13.06□□□□□ -0.32
CPSF7-211ENST00000477890 AMHR2Q16671 573 aa13.06□□□□□ -0.32
CPSF7-211ENST00000477890 KIAA0319Q5VV43 1072 aa13.06□□□□□ -0.32
CPSF7-211ENST00000477890 ELMSAN1Q6PJG2 1045 aa13.06□□□□□ -0.32
CPSF7-211ENST00000477890 IFNLR1Q8IU57 520 aaPredicted RBP13.06□□□□□ -0.32
CPSF7-211ENST00000477890 HACE1Q8IYU2 909 aa13.06□□□□□ -0.32
CPSF7-211ENST00000477890 RNF168Q8IYW5 571 aaPredicted RBP13.06□□□□□ -0.32
CPSF7-211ENST00000477890 NECAB1Q8N987 351 aa13.06□□□□□ -0.32
CPSF7-211ENST00000477890 FLCNQ8NFG4 579 aa13.06□□□□□ -0.32
CPSF7-211ENST00000477890 CMASQ8NFW8 434 aaPredicted RBP13.06□□□□□ -0.32
CPSF7-211ENST00000477890 TNFRSF25Q93038 417 aa13.06□□□□□ -0.32
CPSF7-211ENST00000477890 HSD17B14Q9BPX1 270 aa13.06□□□□□ -0.32
CPSF7-211ENST00000477890 NXF3Q9H4D5 531 aaKnown RBP13.06□□□□□ -0.32
CPSF7-211ENST00000477890 TTC12Q9H892 705 aaPredicted RBP13.06□□□□□ -0.32
CPSF7-211ENST00000477890 KCNK12Q9HB15 430 aa13.06□□□□□ -0.32
CPSF7-211ENST00000477890 ANKEF1Q9NU02 776 aa13.06□□□□□ -0.32
CPSF7-211ENST00000477890 DPP7Q9UHL4 492 aa13.06□□□□□ -0.32
CPSF7-211ENST00000477890 FBXL21Q9UKT6 434 aa13.06□□□□□ -0.32
CPSF7-211ENST00000477890 DUSP12Q9UNI6 340 aa13.06□□□□□ -0.32
CPSF7-211ENST00000477890 GIT1Q9Y2X7 761 aa13.06□□□□□ -0.32
CPSF7-211ENST00000477890 MTCL1Q9Y4B5 1905 aaKnown RBP13.05□□□□□ -0.32
CPSF7-211ENST00000477890 B4GALT5O43286 388 aa13.05□□□□□ -0.32
CPSF7-211ENST00000477890 RFPL2O75678 378 aa13.05□□□□□ -0.32
CPSF7-211ENST00000477890 NPTXRO95502 500 aa13.05□□□□□ -0.32
CPSF7-211ENST00000477890 EFEMP2O95967 443 aa13.05□□□□□ -0.32
CPSF7-211ENST00000477890 SPATA31D3P0C874 917 aa13.05□□□□□ -0.32
CPSF7-211ENST00000477890 GLRA2P23416 452 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms