RNA–Protein interactions for RNA: ENST00000477739.1

CMC1-209, Transcript of C-X9-C motif containing 1, humanhuman

TSL 1 (best)

Gene CMC1, Length 3,749 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-209ENST00000477739 ISCUQ9H1K1 167 aa10.49□□□□□ -0.73
CMC1-209ENST00000477739 BTAF1O14981 1849 aa10.49□□□□□ -0.73
CMC1-209ENST00000477739 LAMB2P55268 1798 aa10.49□□□□□ -0.73
CMC1-209ENST00000477739 EDIL3O43854 480 aa10.49□□□□□ -0.73
CMC1-209ENST00000477739 ACCSLQ4AC99 568 aa10.49□□□□□ -0.73
CMC1-209ENST00000477739 CYB5D1Q6P9G0 228 aa10.49□□□□□ -0.73
CMC1-209ENST00000477739 ISLR2Q6UXK2 745 aa10.49□□□□□ -0.73
CMC1-209ENST00000477739 SYCE1Q8N0S2 351 aa10.49□□□□□ -0.73
CMC1-209ENST00000477739 TTC16Q8NEE8 873 aa10.49□□□□□ -0.73
CMC1-209ENST00000477739 ARHGEF2Q92974 986 aaKnown RBP10.49□□□□□ -0.73
CMC1-209ENST00000477739 CNKSR1Q969H4 720 aa10.49□□□□□ -0.73
CMC1-209ENST00000477739 STAMBPL1Q96FJ0 436 aa10.49□□□□□ -0.73
CMC1-209ENST00000477739 GLIS2Q9BZE0 524 aaPredicted RBP10.49□□□□□ -0.73
CMC1-209ENST00000477739 C12orf65Q9H3J6 166 aaKnown RBP10.49□□□□□ -0.73
CMC1-209ENST00000477739 FERP16591 822 aa10.48□□□□□ -0.73
CMC1-209ENST00000477739 CLK2P49760 499 aaKnown RBP10.48□□□□□ -0.73
CMC1-209ENST00000477739 MXI1P50539 228 aa10.48□□□□□ -0.73
CMC1-209ENST00000477739 ORC1Q13415 861 aa10.48□□□□□ -0.73
CMC1-209ENST00000477739 DACT2Q5SW24 774 aa10.48□□□□□ -0.73
CMC1-209ENST00000477739 CBWD2Q8IUF1 395 aa10.48□□□□□ -0.73
CMC1-209ENST00000477739 PARP9Q8IXQ6 854 aa10.48□□□□□ -0.73
CMC1-209ENST00000477739 FLAD1Q8NFF5 587 aa10.48□□□□□ -0.73
CMC1-209ENST00000477739 CHMP6Q96FZ7 201 aa10.48□□□□□ -0.73
CMC1-209ENST00000477739 AGBL1Q96MI9 1066 aa10.48□□□□□ -0.73
CMC1-209ENST00000477739 GANQ9H2C0 597 aa10.48□□□□□ -0.73
CMC1-209ENST00000477739 EHMT1Q9H9B1 1298 aa10.48□□□□□ -0.73
CMC1-209ENST00000477739 GDF3Q9NR23 364 aa10.48□□□□□ -0.73
CMC1-209ENST00000477739 MTUS1Q9ULD2 1270 aa10.48□□□□□ -0.73
CMC1-209ENST00000477739 GINS2Q9Y248 185 aa10.48□□□□□ -0.73
CMC1-209ENST00000477739 PYGMP11217 842 aa10.48□□□□□ -0.73
CMC1-209ENST00000477739 MDH1BQ5I0G3 518 aa10.48□□□□□ -0.73
CMC1-209ENST00000477739 SPOPLQ6IQ16 392 aa10.48□□□□□ -0.73
CMC1-209ENST00000477739 KDM7AQ6ZMT4 941 aa10.48□□□□□ -0.73
CMC1-209ENST00000477739 SH3BP5LQ7L8J4 393 aa10.48□□□□□ -0.73
CMC1-209ENST00000477739 TMC3Q7Z5M5 1100 aa10.48□□□□□ -0.73
CMC1-209ENST00000477739 ANKMY2Q8IV38 441 aa10.48□□□□□ -0.73
CMC1-209ENST00000477739 PBKQ96KB5 322 aa10.48□□□□□ -0.73
CMC1-209ENST00000477739 FAM20AQ96MK3 541 aa10.48□□□□□ -0.73
CMC1-209ENST00000477739 OSBPL7Q9BZF2 842 aa10.48□□□□□ -0.73
CMC1-209ENST00000477739 TYW1Q9NV66 732 aaKnown RBP10.48□□□□□ -0.73
CMC1-209ENST00000477739 HNRNPDLO14979 420 aaKnown RBP10.48□□□□□ -0.73
CMC1-209ENST00000477739 BCRP11274 1271 aa10.48□□□□□ -0.73
CMC1-209ENST00000477739 RPA1P27694 616 aa10.48□□□□□ -0.73
CMC1-209ENST00000477739 RPL21P46778 160 aaKnown RBP10.48□□□□□ -0.73
CMC1-209ENST00000477739 SCTRP47872 440 aa10.48□□□□□ -0.73
CMC1-209ENST00000477739 CDK17Q00537 523 aa10.48□□□□□ -0.73
CMC1-209ENST00000477739 KIAA1755Q5JYT7 1200 aa10.48□□□□□ -0.73
CMC1-209ENST00000477739 XPO6Q96QU8 1125 aaKnown RBP10.48□□□□□ -0.73
CMC1-209ENST00000477739 SH3GL2Q99962 352 aa10.48□□□□□ -0.73
CMC1-209ENST00000477739 PNMA3Q9UL41 463 aa10.48□□□□□ -0.73
CMC1-209ENST00000477739 ATF5Q9Y2D1 282 aaPredicted RBP10.48□□□□□ -0.73
CMC1-209ENST00000477739 F8VZ95 297 aa10.47□□□□□ -0.73
CMC1-209ENST00000477739 DIAPH2O60879 1101 aa10.47□□□□□ -0.73
CMC1-209ENST00000477739 KRT10P13645 584 aa10.47□□□□□ -0.73
CMC1-209ENST00000477739 COL5A3P25940 1745 aaPredicted RBP10.47□□□□□ -0.73
CMC1-209ENST00000477739 MAPK4P31152 587 aa10.47□□□□□ -0.73
CMC1-209ENST00000477739 KCNJ2P63252 427 aa10.47□□□□□ -0.73
CMC1-209ENST00000477739 PHLDB3Q6NSJ2 640 aa10.47□□□□□ -0.73
CMC1-209ENST00000477739 PADI6Q6TGC4 694 aa10.47□□□□□ -0.73
CMC1-209ENST00000477739 NT5DC3Q86UY8 548 aa10.47□□□□□ -0.73
CMC1-209ENST00000477739 PLIN4Q96Q06 1357 aa10.47□□□□□ -0.73
CMC1-209ENST00000477739 RAVER2Q9HCJ3 691 aaKnown RBP10.47□□□□□ -0.73
CMC1-209ENST00000477739 KCNMB3Q9NPA1 279 aa10.47□□□□□ -0.73
CMC1-209ENST00000477739 CCPG1Q9ULG6 757 aa10.47□□□□□ -0.73
CMC1-209ENST00000477739 TPX2Q9ULW0 747 aaKnown RBP10.47□□□□□ -0.73
CMC1-209ENST00000477739 ZNF148Q9UQR1 794 aa10.47□□□□□ -0.73
CMC1-209ENST00000477739 BANF1O75531 89 aa10.47□□□□□ -0.73
CMC1-209ENST00000477739 BRAFP15056 766 aa10.47□□□□□ -0.73
CMC1-209ENST00000477739 NOVP48745 357 aa10.47□□□□□ -0.73
CMC1-209ENST00000477739 ACOT2P49753 483 aa10.47□□□□□ -0.73
CMC1-209ENST00000477739 ZBTB16Q05516 673 aa10.47□□□□□ -0.73
CMC1-209ENST00000477739 TRAF1Q13077 416 aa10.47□□□□□ -0.73
CMC1-209ENST00000477739 STXBP4Q6ZWJ1 553 aa10.47□□□□□ -0.73
CMC1-209ENST00000477739 CHURC1Q8WUH1 139 aa10.47□□□□□ -0.73
CMC1-209ENST00000477739 SPOCK2Q92563 424 aa10.47□□□□□ -0.73
CMC1-209ENST00000477739 TMEM237Q96Q45 408 aa10.47□□□□□ -0.73
CMC1-209ENST00000477739 KCTD10Q9H3F6 313 aa10.47□□□□□ -0.73
CMC1-209ENST00000477739 COG5Q9UP83 839 aa10.47□□□□□ -0.73
CMC1-209ENST00000477739 LTBP4Q8N2S1 1624 aa10.47□□□□□ -0.73
CMC1-209ENST00000477739 ASTN1O14525 1302 aa10.47□□□□□ -0.73
CMC1-209ENST00000477739 TMEM120BA0PK00 339 aa10.47□□□□□ -0.73
CMC1-209ENST00000477739 ENO4A6NNW6 628 aa10.47□□□□□ -0.73
CMC1-209ENST00000477739 UBOX5O94941 541 aa10.47□□□□□ -0.73
CMC1-209ENST00000477739 SLC12A3P55017 1021 aa10.47□□□□□ -0.73
CMC1-209ENST00000477739 KRT17Q04695 432 aa10.47□□□□□ -0.73
CMC1-209ENST00000477739 OVGP1Q12889 678 aa10.47□□□□□ -0.73
CMC1-209ENST00000477739 MTMR3Q13615 1198 aa10.47□□□□□ -0.73
CMC1-209ENST00000477739 PPP4R3CPQ6ZMV5 832 aa10.47□□□□□ -0.73
CMC1-209ENST00000477739 RNF207Q6ZRF8 634 aa10.47□□□□□ -0.73
CMC1-209ENST00000477739 SYT2Q8N9I0 419 aaPredicted RBP10.47□□□□□ -0.73
CMC1-209ENST00000477739 PRPF38AQ8NAV1 312 aaKnown RBP10.47□□□□□ -0.73
CMC1-209ENST00000477739 ZNF564Q8TBZ8 553 aaPredicted RBP10.47□□□□□ -0.73
CMC1-209ENST00000477739 RFFLQ8WZ73 363 aa10.47□□□□□ -0.73
CMC1-209ENST00000477739 FAM213AQ9BRX8 229 aa10.47□□□□□ -0.73
CMC1-209ENST00000477739 WDR11Q9BZH6 1224 aa10.47□□□□□ -0.73
CMC1-209ENST00000477739 NKIRAS1Q9NYS0 192 aa10.47□□□□□ -0.73
CMC1-209ENST00000477739 WNK3Q9BYP7 1800 aa10.47□□□□□ -0.73
CMC1-209ENST00000477739 KIAA1551Q9HCM1 1747 aa10.46□□□□□ -0.73
CMC1-209ENST00000477739 KLRG2A4D1S0 409 aaPredicted RBP10.46□□□□□ -0.73
CMC1-209ENST00000477739 IPO5O00410 1097 aaKnown RBP10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms