RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 NMRK1Q9NWW6 199 aa13.56□□□□□ -0.24
RTFDC1-207ENST00000477573 EURLQ9NYK6 297 aa13.56□□□□□ -0.24
RTFDC1-207ENST00000477573 RNF14Q9UBS8 474 aa13.56□□□□□ -0.24
RTFDC1-207ENST00000477573 CNOT8Q9UFF9 292 aaKnown RBP13.56□□□□□ -0.24
RTFDC1-207ENST00000477573 TTC7AQ9ULT0 858 aaPredicted RBP13.56□□□□□ -0.24
RTFDC1-207ENST00000477573 NFU1Q9UMS0 254 aa13.56□□□□□ -0.24
RTFDC1-207ENST00000477573 SSX2IPQ9Y2D8 614 aa13.56□□□□□ -0.24
RTFDC1-207ENST00000477573 REXO2Q9Y3B8 237 aaKnown RBP13.56□□□□□ -0.24
RTFDC1-207ENST00000477573 NFS1Q9Y697 457 aa13.56□□□□□ -0.24
RTFDC1-207ENST00000477573 OAS1P00973 400 aaKnown RBP13.56□□□□□ -0.24
RTFDC1-207ENST00000477573 SPATA31D3P0C874 917 aa13.56□□□□□ -0.24
RTFDC1-207ENST00000477573 MARCKSP29966 332 aaPredicted RBP13.56□□□□□ -0.24
RTFDC1-207ENST00000477573 MATR3P43243 847 aaKnown RBP eCLIP13.56□□□□□ -0.24
RTFDC1-207ENST00000477573 FXR1P51114 621 aaKnown RBP eCLIP13.56□□□□□ -0.24
RTFDC1-207ENST00000477573 ZBTB17Q13105 803 aa13.56□□□□□ -0.24
RTFDC1-207ENST00000477573 MTMR3Q13615 1198 aa13.56□□□□□ -0.24
RTFDC1-207ENST00000477573 ARHGEF6Q15052 776 aa13.56□□□□□ -0.24
RTFDC1-207ENST00000477573 PFKFB3Q16875 520 aaPredicted RBP13.56□□□□□ -0.24
RTFDC1-207ENST00000477573 DEPDC1Q5TB30 811 aa13.56□□□□□ -0.24
RTFDC1-207ENST00000477573 SPATA31D4Q6ZUB0 917 aa13.56□□□□□ -0.24
RTFDC1-207ENST00000477573 UNC13DQ70J99 1090 aa13.56□□□□□ -0.24
RTFDC1-207ENST00000477573 MARK2Q7KZI7 788 aaKnown RBP13.56□□□□□ -0.24
RTFDC1-207ENST00000477573 FNDC8Q8TC99 324 aa13.56□□□□□ -0.24
RTFDC1-207ENST00000477573 SLC16A10Q8TF71 515 aa13.56□□□□□ -0.24
RTFDC1-207ENST00000477573 CPLX3Q8WVH0 158 aa13.56□□□□□ -0.24
RTFDC1-207ENST00000477573 NUDCD1Q96RS6 583 aa13.56□□□□□ -0.24
RTFDC1-207ENST00000477573 ZNF711Q9Y462 761 aa13.56□□□□□ -0.24
RTFDC1-207ENST00000477573 USH1CQ9Y6N9 552 aa13.56□□□□□ -0.24
RTFDC1-207ENST00000477573 SPECC1L-ADORA2AF8WAN1 911 aa13.55□□□□□ -0.24
RTFDC1-207ENST00000477573 TEX33O43247 280 aa13.55□□□□□ -0.24
RTFDC1-207ENST00000477573 TACC1O75410 805 aa13.55□□□□□ -0.24
RTFDC1-207ENST00000477573 LCA5LO95447 670 aa13.55□□□□□ -0.24
RTFDC1-207ENST00000477573 BMP15O95972 392 aa13.55□□□□□ -0.24
RTFDC1-207ENST00000477573 HLA-DOAP06340 250 aa13.55□□□□□ -0.24
RTFDC1-207ENST00000477573 CALML3P27482 149 aa13.55□□□□□ -0.24
RTFDC1-207ENST00000477573 SERPINB3P29508 390 aa13.55□□□□□ -0.24
RTFDC1-207ENST00000477573 PAFAH1B1P43034 410 aa13.55□□□□□ -0.24
RTFDC1-207ENST00000477573 SCNN1DP51172 638 aa13.55□□□□□ -0.24
RTFDC1-207ENST00000477573 CYP4A11Q02928 519 aa13.55□□□□□ -0.24
RTFDC1-207ENST00000477573 KIF22Q14807 665 aa13.55□□□□□ -0.24
RTFDC1-207ENST00000477573 FERMT2Q96AC1 680 aa13.55□□□□□ -0.24
RTFDC1-207ENST00000477573 ZDHHC15Q96MV8 337 aa13.55□□□□□ -0.24
RTFDC1-207ENST00000477573 TMEM47Q9BQJ4 181 aa13.55□□□□□ -0.24
RTFDC1-207ENST00000477573 RXFP1Q9HBX9 757 aa13.55□□□□□ -0.24
RTFDC1-207ENST00000477573 SH3GLB2Q9NR46 395 aa13.55□□□□□ -0.24
RTFDC1-207ENST00000477573 ZNF219Q9P2Y4 722 aaPredicted RBP13.55□□□□□ -0.24
RTFDC1-207ENST00000477573 TSC22D4Q9Y3Q8 395 aa13.55□□□□□ -0.24
RTFDC1-207ENST00000477573 PCDHB2Q9Y5E7 798 aa13.55□□□□□ -0.24
RTFDC1-207ENST00000477573 MYO3BQ8WXR4 1341 aa13.55□□□□□ -0.24
RTFDC1-207ENST00000477573 TTC34A8MYJ7 566 aa13.55□□□□□ -0.24
RTFDC1-207ENST00000477573 BACH1O14867 736 aa13.55□□□□□ -0.24
RTFDC1-207ENST00000477573 CYP1A1P04798 512 aaPredicted RBP13.55□□□□□ -0.24
RTFDC1-207ENST00000477573 FAM153BP0C7A2 387 aa13.55□□□□□ -0.24
RTFDC1-207ENST00000477573 CRKP46108 304 aa13.55□□□□□ -0.24
RTFDC1-207ENST00000477573 CARSP49589 748 aaKnown RBP13.55□□□□□ -0.24
RTFDC1-207ENST00000477573 ZNF844Q08AG5 666 aa13.55□□□□□ -0.24
RTFDC1-207ENST00000477573 NR5A1Q13285 461 aa13.55□□□□□ -0.24
RTFDC1-207ENST00000477573 MSLNQ13421 630 aaPredicted RBP13.55□□□□□ -0.24
RTFDC1-207ENST00000477573 PNOCQ13519 176 aa13.55□□□□□ -0.24
RTFDC1-207ENST00000477573 FAM153CQ494X1 144 aa13.55□□□□□ -0.24
RTFDC1-207ENST00000477573 TBC1D10BQ4KMP7 808 aaPredicted RBP13.55□□□□□ -0.24
RTFDC1-207ENST00000477573 C7orf43Q8WVR3 580 aa13.55□□□□□ -0.24
RTFDC1-207ENST00000477573 TMEM237Q96Q45 408 aa13.55□□□□□ -0.24
RTFDC1-207ENST00000477573 TPK1Q9H3S4 243 aa13.55□□□□□ -0.24
RTFDC1-207ENST00000477573 CABP5Q9NP86 173 aa13.55□□□□□ -0.24
RTFDC1-207ENST00000477573 DDX43Q9NXZ2 648 aaKnown RBP13.55□□□□□ -0.24
RTFDC1-207ENST00000477573 FAM153AQ9UHL3 310 aa13.55□□□□□ -0.24
RTFDC1-207ENST00000477573 HEY1Q9Y5J3 304 aa13.55□□□□□ -0.24
RTFDC1-207ENST00000477573 SNED1Q8TER0 1413 aa13.54□□□□□ -0.24
RTFDC1-207ENST00000477573 hCG_1642624A0A1W2PR95 340 aa13.54□□□□□ -0.24
RTFDC1-207ENST00000477573 SNX3O60493 162 aa13.54□□□□□ -0.24
RTFDC1-207ENST00000477573 DHX9Q08211 1270 aaKnown RBP13.54□□□□□ -0.24
RTFDC1-207ENST00000477573 NT5DC1Q5TFE4 455 aa13.54□□□□□ -0.24
RTFDC1-207ENST00000477573 CDC42EP5Q6NZY7 148 aa13.54□□□□□ -0.24
RTFDC1-207ENST00000477573 CROCCP3Q8IVE0 287 aa13.54□□□□□ -0.24
RTFDC1-207ENST00000477573 MXD3Q9BW11 206 aa13.54□□□□□ -0.24
RTFDC1-207ENST00000477573 SLC7A5P2Q9GIP4 190 aa13.54□□□□□ -0.24
RTFDC1-207ENST00000477573 TXLNGQ9NUQ3 528 aa13.54□□□□□ -0.24
RTFDC1-207ENST00000477573 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.54□□□□□ -0.24
RTFDC1-207ENST00000477573 TRIM10Q9UDY6 481 aa13.54□□□□□ -0.24
RTFDC1-207ENST00000477573 MAD2L2Q9UI95 211 aa13.54□□□□□ -0.24
RTFDC1-207ENST00000477573 SERPINB13Q9UIV8 391 aa13.54□□□□□ -0.24
RTFDC1-207ENST00000477573 RASAL2Q9UJF2 1139 aa13.54□□□□□ -0.24
RTFDC1-207ENST00000477573 CCPG1Q9ULG6 757 aa13.54□□□□□ -0.24
RTFDC1-207ENST00000477573 USP15Q9Y4E8 981 aaPredicted RBP13.54□□□□□ -0.24
RTFDC1-207ENST00000477573 PLIN4Q96Q06 1357 aa13.54□□□□□ -0.24
RTFDC1-207ENST00000477573 TRIM75PA6NK02 468 aa13.54□□□□□ -0.24
RTFDC1-207ENST00000477573 BOLA2-SMG1P6H3BVE0 249 aa13.54□□□□□ -0.24
RTFDC1-207ENST00000477573 STAM2O75886 525 aa13.54□□□□□ -0.24
RTFDC1-207ENST00000477573 SUN1O94901 812 aa13.54□□□□□ -0.24
RTFDC1-207ENST00000477573 EIF2S1P05198 315 aaKnown RBP13.54□□□□□ -0.24
RTFDC1-207ENST00000477573 LYNP07948 512 aa13.54□□□□□ -0.24
RTFDC1-207ENST00000477573 POLR2EP19388 210 aaKnown RBP13.54□□□□□ -0.24
RTFDC1-207ENST00000477573 TOB1P50616 345 aaPredicted RBP13.54□□□□□ -0.24
RTFDC1-207ENST00000477573 GABPAQ06546 454 aa13.54□□□□□ -0.24
RTFDC1-207ENST00000477573 TTLL12Q14166 644 aaPredicted RBP13.54□□□□□ -0.24
RTFDC1-207ENST00000477573 SUZ12Q15022 739 aaKnown RBP13.54□□□□□ -0.24
RTFDC1-207ENST00000477573 DACT2Q5SW24 774 aa13.54□□□□□ -0.24
RTFDC1-207ENST00000477573 SYCP2LQ5T4T6 812 aa13.54□□□□□ -0.24
RTFDC1-207ENST00000477573 RESP18Q5W5W9 173 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms